Contig Data
morexGenes
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Map Locations of contig_276601 (3131 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_276601

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45173 2 1559 bp MLOC_45173.2 Available Available LOC_Os01g51540.1, FRAME:-3, EVALUE:1e-18, 13101.m05379 protein cytidine/deoxycytidylate deaminase, putative, expressed





CDS Structure of MLOC_45173






Contig Sequence (3131 bp)

>contig_276601 3131 assembly3_WGSMorex_rbca.fasta
ACGCGGTGAGAGATCAACCTAACAACACGTAGTAGGTGGGGTGGAATCTTGAATTCCTTT
GCCCGGGCGCTCCCGAACGAGAGCGGGCTCACAGCATGCGGCTTGTTGATAGCGTGGGGA
TCACCGCGTGTTGTTGCAACAGGAACACTTATTCCTACATTGTCGGCGTTGATTAGATGA
CCTTGTGGCTGTTACGCGGCCGACGCCCATGGTCGATGCAGGGGGCGTCCGCCGGAGCCA
TCTCGACGTCGGAGAAGACGAGCCTCTCACGCACAGGCCCTCGCGCCGCGTCGCCCAACC
CCTCCTTCAACCGTCCCCCATCCCGCCTGTTCTTTGGGTTCTTGGGGAACTCTTTGCCGA
AGTGCCCGGGGAGCTTGCAGATGATGCAGCGGAGCGGGTCGCGATAGTCTACTCTACGGT
GGCGCGTGCTAAGACAGCAGAAGCAGAGCCCCTTGAATCGGCTTAAGAAGGCAGCGGGAC
TCGGCGAGTCCCCGTGATCAAGATGTTGTCGGGGGCCAATCTTGCAAGGCATCGCCCTCG
GATCCGCGTTGAGGCGCTTGCTCTTGGGGGATTGATGGCGCATTCATCCTTCTTCAATGT
CGTTGGATCCATCTGTTGCCTGAAATGAAGGGGGAGGGGCGTACCACGATGGATTGAAGC
TTGTGTTTCCTCGGCAGCGGGGGCGATTCTTGATTCGCCGATCCTTCAGGCCTTGTTCGG
TTCCTTCCCAATTGAAGGGGTTTCGAGGGGATCGAGAGGGATTAAATCCCCTGCAAGTCA
AATTCCATCTCAATCCCCTTCAATCCCCTCCAATCCCCTCTTGCTGGGATTAACCGAACA
AGCCCTGAGAGATCTCCTCCGTGGGGGCCGGGCCCCGGCACAGGAAACGCAGCGATGACC
CGCGCCCGCTGCGAGCTGCTTGGGAGGACGCACCCCGCACAATGAACGGACCGGAGGTTA
GATCTGGCCCTCAGTCGCACTGATTGTGCGGCGCCGCATGCGCGTGATCTCGGGGTGACA
GGGGAGGCGGCGCGGTCATGAGGGCCGGGCAGGAGTAGCAGGGGGCGTGCGACCCCGGGT
TGGTGGCCGCCACGGCCTGAGTGGCCAGCGGGAGGGGGCTAGGGGGAGCTCAGCTCAGCT
CCTGTGGTATTACTTAAATTTCCAAAACCATATTTCCGTTTCCATGCATGTAGGTCGTTT
TAAATTTCCCAGATCTCTTTACCTTCATGATCGTTTAAGAGGTATATTTACTAAGTTCGA
CTGTAGATTTGCTCTTAGGTGGCACATGATTTTCCTATAAACCTGCCGGTCATGAGAGTC
TTCGCATTGGCGTGCAGGTACGGCGAGCCAGTATTCCTCTTAGCTGTTGTCAGCCGTGGT
GAACACAAATACAGGAAAGGTATCACCCCAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGA
AAAAAGAAACAGGAAAGGGATATGCTTCGCTGATGTCCTGTCCTACCTACTGAAGCGCAG
CTTCCACTCTGAGCCGTCCATGGCTACGGGACAAGCAAGAACGACGACAGTACATTTTTA
GCTAGGCCTGCTATTTATACCGACGTGACGGCTGATTAGATCAAAGATCACGATTGCTTT
AAATAGTAGCCAGTTGCTTCATTTTATCAAGCCGCTGAACAACCGGCACAGGATGTATCC
GTCTGCTCTGAAAGAATTCTTGAGCACTGCAACTGCAAGAGAGTTCACCACGGAACGAAC
TCCGGCTCATACGTGCAGTCGTGTCGAAATACCTCGGCTGCAGGACTATGCCCGGCGACA
GAAACATGCTTGGCGTTTGCTTGGCTTGGTTGCATAGTCGGCTCAAGCTGTCGAGCACAA
GCTTACCGCTTACATAGCCATCGGAAAGCGACCAGTGGCCTGGGTTTGGACGCAGAACCA
CTTGGGTCCGTCAGGACAAGGACGCTGAACACAACCGAGATCGATCAAAGACGGGATCGC
CGTCAAAATCCGGTGGCTGCTAATTTATGTATTTATTTAACAATGGTTTGCCGTGACTGA
CTTATTAACGCAGCGCTCGTAACACCATCGCTATCTATGCACAGGTTTGTTGTTTTTCTC
CTCTTGCGTTTGTTTATAACAATGTTATTAAGTATCAGGGGTGGTCAGCAACCCACTTTC
TTCCGGCAAAATGATATCAGAATTGCTAGGATATTCCTATAAGACTGACTTGACTATGAT
TGTATGATTGCGCTTTGCGTCATCTAATCGGGGATAGACTTGGGCTGTGATTGCACGTTT
GGAGTCTACCTAATCTGTCGCTAATCTACATACGCCCTTGCTTTACTCCGTGGCAACCAA
CTGCCTACAGCTCAGCCCCACCAAGAGAAGTTCGTAAAGCGATCCATGGATCGATCATGT
GTTTGAGGCTTGCAAGGAACAAGCGGCCCCATTGCCTGATTGGCTGGATGGATAATCAGC
GGTCCGGCGGTGCGTGCAGCACGAGCTCCTTCATTCTATCTATTTTTTATGTTTCCTATT
TCAGTTTTCTACTGTAGTAAAGTGTCATGAGCTGTAGTGTGTAATTCGTTCAAGCAACGA
CGTAGAGCAAGAGACGGGGAAGGAGAAGCATCCAGGAAATACTTCACCTGTTTAATACGG
CATCGTTCAGATAATTTTTACTTCTATTTTTTTCTCGTAATAATACACACATGAACACAA
GAAGTGGTAAGTAGGAGTAGGTCCCAACTCTGGGTGTCCGATCGGCGGATCCCGAGCCCC
GTGTGGAATTTACAGCTCACCCATCTGCACAAAAGATTATTTTCTCGTCGTATTATTATT
CTTGAAGATTATGAACATTATCTCGTTGGATCTCGCGGCCTGCTCTCCCCACCCCAGAGA
GGGTCCGGAGGCGCGCATCACACATCGGACGACCTGTATTTGTACACGTGGAAGCTCGCC
TGCGGCGCCACAGCAGCCAGGAAGAACCTGGCCGTCGCCTCCTGCGCCGCCACCGCCCCC
TCCTTCTCCACCAGCGCCGCCGCCACCACGTCCCCGGCGGGGCCTCCTCCCCCGGCGACC
ATCGCAATGATGGCCGTCTGCACGGGGCCCAGCGTCGGGTTGTACGCCGCGGACTCCAGG
CAGCCCCCGGC