Map Locations of contig_276562 (4151 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_276562

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45165 2 1534 bp AK361557 Available Available None





CDS Structure of MLOC_45165






Contig Sequence (4151 bp)

>contig_276562 4151 assembly3_WGSMorex_rbca.fasta
TGGTTGCGCCCTAGGTCTTGGAGGGGTTGTTCCCCACGCCCCTCCACCTATATATAAAGA
GAGGAGGGGGCGCCCCAAGAGCACACATGAAGCCCTTGGCGCCCCTCTCTCTCCCTAGAT
CGTTTTCTTCTCTGTTTGAAGTTTCGGTAGTGCTAGGCGTAGCTCTGTCGGGATACCACC
ACCACAACCTCCAGCACGCCGTCGTGTCATCGGAGAACTCATCTACTACTCTGCCCTAGC
TCGCTTGATCGAGAAGGCGGAGACGTCATCGAGATGTACGTGTTTTGATCGCAGAGGTGT
TGTCCGTTCGACACTTGATCAGGAGTTCATGGCACGGATCATGATAGGATCGCAAAGACG
TACCACTACATCAACCGCGTTCTTTAACTCTTCCGTTTAGTGATCTACAAGGGTATGTGA
ATCCGATCTCTCCTCTCATAGATGCTCATCACCATAGATAGATCTTGTATGCGCGTAGGA
AAAGATTTGTTTCCCATGCAACGTTTCCCAACACATCAACATCCGCTCGCCGGACCAAAC
TGTAGACACTTCACTCCACTCCCATCCACTCACCTCTGGCGATCTCCGGCCTTCTCCGGC
ATGACGGGCAGCGGATCCAAGTCCTTCACCTCCAGATCCGTTGACCACGAGCTCATCCCA
AGCGGCCCCAATGAGGAAATGGTTGTTCGGCTTGCGCTCTGCCGCTTCCAGGAGACGGCC
GCCCTTCGGCAACACTTCGACTCGCAACGTCAAGAATCCACTACGTCAACACAGCCGGTG
CCTAGATCTGGCGTCGCTGCCTCAACGGAGACGATGCAGTCCATGTGGCGTCTGAATGTC
ATGGCGGACACGCAACCCCTCCGTTGGCGCGTCGAGGACGCACCTTGGCGTGGCGTGCCA
GGCAGCAGGCACGAGAGGTGGAGGAGGCCCTCGCGGCGGTGGATGTTGGAGAGGCGGGGT
CACATTCTCGGGCGCCCAGTATAATGCACAGGCGCGGGCGCCGCAACCGCGTCGTGGTCA
ACATCGTCTCCTCTCAGGAAGGGTCCGTCATCGACCTAACGTCCACCGGCACCGTCCGGG
TGACGGTCTCCGATGAGGAAGAGTAGGGCATGGGAGAAACCGGGAGTTCGACTCCCGTGA
GCCGGCTAGTGTCCCATATCCTACTCTCCCTCGCAGGCAACCGGACCGACGCTACGAGGG
GCGCAGCCGGCCGCCGGACATGGGCACGATAGAACTGGACAAGCTGGATTTGAGGTTTTA
ATTTGAGGTGTCCGGTTGTAGAATGCATAATTTAAGGCGTGACCACAGTCAGTGTCCGCG
GACGCGTTCGCGGGCGTTTGAGGGGTCAGATTTGTCAAGTCCGGCTGTAGATGCTCTTAG
CTGTCTATTTTCCAGAGATGCCTAAGTAAACCTCAATGTAACACTCTGGTCCATATGGCT
TTTTGCCCTTTTTATGAAAATCTTTTGCTTTATATATTATTAGTGCACAACAAATGTCTG
CGTGCTTATTAAATACACACAAGATAAATAGCTGCTGCAGCCTGCAAGCAGTCGCATCTC
TCAACTATCCTTCTTCCTGTTGGTGTTGGGAACACTGTGATCCTTCTAATAATAACATGA
CATCTTGGTAGCAATTGGCAGATTGCTAGTATCGTCCATAGCAGTAGCACTACATCTCTC
CAGGAAGCATTGTATCCCCAGGAAGATCACAAAATGCATTACCCTACATTGCAACAACAC
AACAGATGCGACATTAGTAATTTCTGTAGCATCATTTGCCCTTCACTTCAACAAGAGCCC
AAGTACTTTTCAACATCGCTTACCTCCCCTGTAAGATGGGCAACACATCTTTTCTCAGCG
ATCAGTTCAGCTTCACTCTGAAGGAATTATTAGATGATCAATTCAGCTTCACTCTATTCT
CTCCTTATTTAATAGATGAGGCAAATCTTGTACCTCCGTTTTGAAAAAAAAATATAATGC
ATATTATCAACGATTATTCCTACAACTCAGTAGTACCTTTTTGATCCGGCCCCAGAGAAA
ATCGTCCATTGCCACATCTTTAACTAGTTCATAGTCGCCATCGCCCTATATGAATAATGT
CATAGTGCAAATTGCCATCTTGTATAACACTCCTATAGGGAAGAAAAGTACTAATGAGGA
TTTCAGTTTGAAATCTTACCTTTGATCTGCACGGCATACTGAATACGATATCATCTACTA
TGCCATAAGGATTTCCGGTCGTATAAACCTATTGTTTGGCATCGCCTTTGCTTCAGTGGT
ACATCAAAACAAAAGAAACAATGAACAATCCTATAGTAGAAAACATTACCCCTGTAGAGA
ACCAGTCTCCTTCCGGCGTAGGAGTTACGAGGGACCTCATTGCATCGACGATGGAAACAG
CGGTTGATGCAGCTGAAGATCTGCCCCACTTTTGGATGAGCACACCTCCACGCTGCATAG
CCATTGGAATGAATACACAATATTCTCTTAGTTGTCCCAAATGATAGATGAATTGCAGAT
GAATGTGGAACAGCGTGTACCTTTTGAACAGTTATAGTGAAATCCTCTTCTAGCCACTTT
GTATCTTCGATGACTTCTTTTACTGGCCTCCCATTAATTTTGGCATTCAAGAAATCAGGA
ACCTACTCAGGTGCAAATCATCAAATCAGTACTCCAAAGCGCTACCGACTGAGTAGGCAT
GTTTGTAATCATATCTTCACCTGAGTTGTTGAATGGTTTCCCCAAATAGTCATATTTGAT
ATTTTGTCATAAAACACACCAGCTTTTAATGCTAGCTGCAAAAGCATTGTGAATGACAGA
TTAGTCTTGTCATTTGTTGAAATAAAATAACAGAAACATATCAGAAATAATTAAGATTCA
ACATCAAGTACCTGACACTTGGCTCTATTTTCATCCAACCTTGTCAATGCATGAAAGTTC
TTTGCTGGTAAGCTGGGCGCATTTTTCAAGCAGATCAAAGCACTACAAGAAGCATATACT
CCAAGTCAAACATGATAATAGCATAAATCAATAACACACTTAGCAACCAAGAAACCTGTC
CATACTTAGTGTTACAGGGGTTCCCAACAACTATGACTTTCACATTCCGAGATGCCACAG
CGTTAAGTGCTTTCCCCTGAGACAATTCAAAATTTCAGCCAATAACAAACAACTATTCTG
TGATCACTTGTGTACTCACATATCTGTTAAAATTAGATTTCTGTTCAAGTTTTTTAGCAG
GTTTCATGCTAAGGAATCCCATAGTTCCCCCTCCATCGAATATGCAAGAGGTCAGGGCAC
ATTTTGTATCTAAGGAACCGCTTAGTTAAATGTCAAAGTTTGAGATATATTTCTTACAAA
GAAAAATAATCTGTCTCTTTACAGAATGGGTTCTTACGATTTTATGACAGTATACTTGAC
AGTTAATATGGAAAAGAATGCAAAAGGAAACCTGTTCAGCGAAGATTTGACCATTGATAT
CTAGTAAGGCAGCTCGCTCCACTCCCGGTCCTCTGGGTTTGGCCCCAATTAGAAGGGCCC
AATCTGCATCTTCGAAGATCACATAAGGATCTACCCCGATGCTGACTTCCCTTAGCAATG
GATACAATGAATCCTCCAGTTCCATAGCTACACCTGCAGTTGTAATTATAAGAAAGCATT
AGGAAGAAGGGCGATATTCCTCTGTCTCAGTAATTCATTTATACCTGGGAGTACAGCAAT
ATTGGAATTGGGAGTGCAGTTTAAAATGTGTATTATGTAGCAATATCGGGGCGGCGTCCT
GGCTCGCGGTGGAGGAGGTCTCCGGCGCGTGGCGCAGGATCTGGTCGCGGCGGTGGGAGC
ACCGCTGCGGGCGAGCGGTCATGGTTGTGGCGCCCGTGGGGACCCAATCTGGACCCTCTA
ACGCTGCGGCCGGCGCGGACGGTGGTGCTGGGATGGAGGGAGGCTCGGCTCCTTGCTGCA
CGTCCTGGAGGGGCCTTTGCTGCGTTCCTCCTGCTTGGTGCCGTGGTGGTGCCGGGTGGT
GGTTCAGCTGACGGGTTGCGGATCTGACAGCTCGTCCGGCGAGTTGGGATGGGGTGGCGG
CCCGCCCTCCGTGCTAAGGTCCTCTCTGGCTGTGAAGCGTGCGGCCGGCGGTGGTGGTCA
TCTCCTCCGTC