Contig Data
morexGenes
Links



Map Locations of contig_276296 (3108 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_276296

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45091 1 166 bp MLOC_45091.1 Available Available LOC_Os02g03730.1, FRAME:+1, EVALUE:3e-11, 13102.m00366 protein SWIB/MDM2 domain containing protein, expressed





CDS Structure of MLOC_45091






Contig Sequence (3108 bp)

>contig_276296 3108 assembly3_WGSMorex_rbca.fasta
GGCGACATCCACGTCCTTTCAGTTACCTTTATGCAAGTGGCTACTAGTGAACGTGGAGAA
TTTGGGTCTAGTTTATTTGAGCATCTGCGTTAAGTTGGGTCAAGGGTGTTGAGAACCTAT
CAAAACTATGTCACATTGTTTTGTGATGTACTGCTATCATGTTTGAATTGCTGTCATGTT
CAAATGGTGAGATGTTGACCTACTGTAATGTTGAAATGGTGAGTTGCTGAACCGGTATGC
TGTGATGTGCTTAATGTTGGGGAATTTGGGCCTGCCATGCTGTGAACTGCTATGTTGTCA
ACTCCTATACTGCTATGTTGTGATGTGCTTCTTGTTTAAAGATATGGAAAAGACGCATGG
TATAGCGCATTTGGTCATTTTGGCATGATCAATTCTGTATGGGCTACCCCCATTTTGACT
ACATATACATTTCCAAGGCCAATTTTGCATGGGCTAGCCACAGTTTAACTACTCATGTTG
AACATAACATAACCAAGGATACCATTTCGAAGGTATTCATTACATAATGAGGGATAGTTT
AGTAGATACTCATCACATAACCAAGGATAGTATAATAGGTACTCATTACATAACATAAGC
AAGAGTGGATTACATAACCCAACTAGTGAACACTGATAGCAGTTCACTCATCAAGTATAG
CCTTCATCTTGGCAAGTTTGTCCTTGTAACCTTGACCAGCTTTGAGGAGATATCCAACAA
CATACTCTAACTTCTTCTCCTCCTCTTTCACAAGATCCCTCTCATGGTTTTATCTCATCC
CTCTCCTTCCTAGTGTTCCTGATGATTTCCCCCTTAGATATAGTAATGCACTTGAGCTCC
TTGTCATCAATAATAAGATTTTCAAACTCCTCCTTCATCTTGTCATTCTCAAGCTTCTCC
TTCTCTTGGTCAATAGTCAGCTTCCGTATCTCCTTGTCTACATCCATATCCTTCTTCTCC
ACATCTTTATCATTCTGCAACTGCTTGTTTTGGTCCTCTACATCGCTCCAATCAAACATC
TTTGTCACATATTCCACCAGCTCGCTGTACTGAGTGCCAAGACTGTCCAACTCCTTCAAT
TTGGCAGTATCTTCCTGATGGACCTGGTGATCCAACATCCTGCCATGATTTTCCTCATGA
AGCATCTCCTAAACTTCACAAGGCATCTTTGAAGTACACCAGGCCATGGGGCGTCAACCC
ACTCAGAAACTCCACAATTAATGCCATCCTACAATAAATTATCCAACTTCAGGTTAAACT
GCCAAAATAAAAGCCAATCAGCCGAAACTGAATCTTTGCAGCACTAAAAATGGAACAATT
GATGAATGTTTGCACTACAAATGGAACAATTTTTGAATCATTGCACCAAAAATGAAACAA
TTGATCAATCTAAAATAAATATAGTTACTAAATGTAATAGAAATGCACACACTAAATGCA
AAGGCCGAATCTAATACAAATAACTGAATCTTTGTACTAGAAATGGACTGAATTAACTTG
AATCTGTCACAGGGTAACTGCAAATGTACTAAAAAAGACTGGATTAAATTGAGGAGCCTA
CATTTGATGCTTGGATTAGCACAAACGTGCACCCCACGGCCATAGAACCTCCTACCACTG
TGAATCCCCTCAAATGCAACATATTTGGAACAGATGGCAAGGTGAAGCGTGCGTTTGATG
CTTGAATCTGAAGCTTTACCACGGAATGATGTGTATACTGTTGTGCCAGGGTTTTCCTCC
AATTTATGTGCACATATTATTTACTATTAGACTACCGGTGCTTGAACAGGATCTTCCAAT
TTATGTGCACACATTATCCACTATTAGACTACCAGTGCTTGAACATGATCTAAAAACGAA
ACAAAACATGAACTTTAACCCTATCTAACCCTAACCCTAGATAAAGACCAAAGCAGTTAC
CCAAAGCTTCATATCCATGCCGACAAACTCGTTGTCTCTGCACTCCTCACCGTCATTCTA
TCAAAAATCGTGGTTAGCAGCCCCAAATCTACCATGTGTTTATTGAAAAAAAAACTGGAA
AAGAAGATAGATTTCTGGGACACATAAGGAATGTGGTGGCAATTCTACTCAGAAACTTCA
AATGTGGTGTTTTTTTATTCACTCGGAATTGTTGATAGCATCATGGTCGGGGAGACTCAA
GCCAGCGTTGTTGGCATAAGGACATTGCTGCCAGGAAGGTTCTAGGGTGGCAATCGTGAC
ATGCAACCATCACTGAGAGGAGACACACGCTTAGGTCTCACGAATATATTTCTTTTCACA
AACTGTTTTTGCTCAATAGTCAGATATCTTTTCCCTTTGACAAACTGTGTTGTCCACCAG
GTAAGCACAATTCTAACAAGCAACCGAGCAAATAAAGAGGCTATCGCTTCTGTCAGAAAA
CCCGCCGCGGTGATTTTACAAAAAAGCCCTTGCTATTTATGACATTCAACCCGCAGTCCC
TTCATAAGTGGATCTGAGAAAACGCTTCCCCCACTCCCAGCCGAAGCGGAGTGACCCACC
CACCTACCCATCTCACGACGATGTTGACGGCGGCGTACACGGTGGGTGCCGGTCCTTCAT
GTCCTCGGCGGCGGCGGCTGCCACGGGGAGCAAGAAGCCCGCAGCGGCGGCGGCGAAGGG
GGCAAGAAGTCCAGAACGGCCGCCGCGAAACCCAAGGCGGTCAAGAAGAAGGGCCCGGTG
GATCCGAACAACCTCCGTGGGATCATGCGGCCGGTGCCGGTCTCCGACGCCCTGAGCAAG
TTCGGCGCCGCCCCCGACATATCCCGCTCCAGCGTCCTCAAGATCGTCTGGGACTACGTC
AAGGCCAACTCCCTCCAGGTAGTGCCCGTCGACAGAGCCCTAGTTGTCCGTTGATCCTAT
TTGTGCGGTCTCGCCTGTATTGCGGCGTGTTAATCCTTGAATGTTGGATTGGGGTGGGGG
TTTCAAAGAAGTGAACTCCGTTTTGGTCGATTTGGTTCTAGATTCGTTTGTGTTACCAGC
GATTAGCGACTGTATTGCCTGAGTTGATGTTGGGATGGGGATGGGGCTGGGGCTGGTGGT
GGGGTGAAACGCCAATGGTGGATTTGGGTGTAGTTTTCTTTCAGCTGT