Contig Data
morexGenes
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Map Locations of contig_276193 (4282 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_276193

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45066 13 3297 bp MLOC_45066.8 Available Available LOC_Os03g57830.1, FRAME:-2, EVALUE:1e-28, 13103.m06344 protein hypothetical protein





CDS Structure of MLOC_45066






Contig Sequence (4282 bp)

>contig_276193 4282 assembly3_WGSMorex_rbca.fasta
TGATGGGCGATGCTTGGTCAGAACTTCCGCAACAACTGAAACAGAAGACTTTCGCTCTTC
GCCTTCTTGTACAGGAGCAGTCATCTTCTCTTCCATCTCAGTCTAAAAGATAATGGATAC
ATTGAGAAACAGTTTGGATCCATGAGAACGAAAGCAAAATAAGCAGACAATAATGAGGAA
AGCACCACCATCAGGTAAGAGATCAGGTAAATACTCTATTCACATAAGTAAACTATGCAC
TACATGTGATGCTGAAGATGATTTGCACATTTTACTGGACACGCTATTTCACCACTAAGA
AAGAGTTCCGGGTATCAAACTTGCAGCAGTTATTCTGGACAAATTAAAGATACAAGAAGC
AGTGATATTCACAGACATGACTCAGAGGTCTCCCAGGTCACAACCTGGCCATTAGCAAAT
CAGAAACTTCATTGCAGATTTTTGTGAAATCACAGCCAAAACCAAATTATCTTCTCTGGT
ATGTATTTACATCAGACAACCGAAAGAGACCTAAGCATGCTAAGGCAGAGGACCAGGATA
TTCTCACATCACACAGGTAGCATCATACAAGTAGAGTTCTATTTTCACATGGATACAGAA
AGAATGATGCTATACATATGCTTCCAGAAACTAAGATAGCAACAAGTGAACAAATTTCAA
TTAACAAGACTGGAGTACTCCTATTGATAATGCAGAACAAGACTGGAGCATTGTATTAAT
TGAACAAGTGAAGTGAATGAGGAGGAAGATCTTTTTTATCTTATCTAAAGTTAGTAGCTA
CCCACCTAAGGACAAGTTGCAGATGTTGGCTATCAAAAAGAAGAGCAGAGTAAGTAAGTA
TACATCAATTTTATGGGATGTGCATACCAGACTGAAAACCTTGAAAGTATAGCACGGGAA
CCTTGTAAGAAAAGTTGTAGACAATATAGAAATCATAAAGATGAACATTATACCTGGAGC
TCTGAACCTGCAAAGAGGTAGAAATCATGGCTGGCGTATAATTAAATTAGGATCTGAAGA
ATTTTAGTTTTATGACTTAAATGTCAATCGCAAAAGAAGGATAGCAATTATCATAGTCCT
TATTGAAAAAACTGAGAACTAGTACTCAGAACTAGTACTAGTAGCCAGTGTATGATGTGA
GGCCAAGTTGATCCTTTCTTGGCTTCTTCCAGTGCTTGTCCATTTATTTATGGCACAATG
CAAGTGGACCTAAAATTAGATTGGTTGCACATAGTGTTCATTTATGCTAATGCGTGCAGC
CAACTAAAGTTTCAAATTACATTAACTGCACTATTTGCATTGGCTGAGTAATCTGTGCTC
GTTTGCACCGAATTAGCTAATTAAAGTTACCGAGTTTGAGTTGTTCTTATTGTTGAAAGC
AAACTTGTTCAACTGAAAATAGTACGCAGTTTCTATAAAACCATTAAGGTGGGTGAATTG
TCATTACATCAAGATTTTTTTATGAGTCAATATACCTAAACCCAAGAGGAAGAGAACGAC
GGATGATAATATAAACAATCTGCAATAGCAAACTATAAACGGAATGGCTAGTTACTAACG
GGTTCTTGACCGCTCTGGCTATGCTATCTTTACCTAGAAAAGAGAATGAGCAGTGAGACA
TAGACCCATGGCTGGAGGTCCTCGCCGCTGCCAGAGAGCGGCCGAGGTCGGAGGCGACAA
CGACACGTGCATCCATCTAGAGCATCTTGGACACCTTGGCGATGGACTCCAAGAGCGCAG
GGATGGCAAATGTCCCTTAGCCAACCGAGTATGTGCCTGAAATGCTTCCCATCCATGTCC
ACGAACACCACCCCCTACATGCATGACTTATCCTCTCAGCTTGCACGCTACCGCTGCCAA
AAATCGCAACAAATGAGATAGTAAGGGTTGTCAAGGGAACATACCGTAGTGGGGTGATGT
GGGAGCGTGTGCCTGGGCGAGTCCCTCGAATTAGAATATGAACTTACTATTATGAGGATA
TGTCCCGCATACACTTTAAAATAAAATATGGCGTACGAGTCTACACGAAATCAATCACTA
TGCAATACGAGTAACCTGAAATAATGCAAGTGAATTAGCTATGCAACTATACAAGTAACC
TGTACAATAGAATATGACTTCAAATATTTCAGACCAACTTTCTTATATAGCATAGAAACT
TCATAGGAAAACATTTTAACCAAACATATTTAGGGCCAGTAGGCATACATATATTAATAA
ACATACCATTTTTTCTGTAGGTGAGGTCATCTTGAGCTTCCATGTAATTCAGCACAAAAG
CACATACTATGTTAGTACATCCACTCCGTACACCATACTTCATTTCCAAATTGGAGAAGA
CAGTACATTACTCTTGGGCTCCTTAATATTAAGTAAATCTAGCAAGATCTCTACCCATCG
AGTAGAATTCCCAAGGAAAATCTACATTCTTATTCAAATTCATCATCATGGGAGGGCTCA
CCTAAGCAAAAAAGCATAAACATGGGAAAACTTACCCAGGTAGCATGCTCTACAACATCA
TCAGGGACAGGGTCATCATCGCTCTCCTCACTCTCAACAGCTGTCGGGCGGCTGGGAGGT
TGAGCAGGCGGATGTGGGCGCCCTCAGGCCCGTGGAGCAGAACGAGGAGGCCATCGGCGG
TGACCGCGAACAGTTCGTGGTCCAGGAGCTCGGGGATGTCCACCTGAATGCACTCGCCGA
TGGAGGTGTTGAGGAAGGAGCGGCGGCTAGGCGCGGCGTGCTCATCCCGGAGCATCGTCC
ACCGCCACGGGTGGAACCGGCGGTCCATCATGCCGTGTGCGCGTGGATCAGCGGAGGATT
GCCGCCAGGGCGGCACACGGCACGAAAACGGACGCAATCACCGACGTCGTTGGAGAGGAC
TCGGTCGGCGATGATTCCCAGCGGCCCCTGCGCGAGGCTCGCCCAATCCCGAGATTCGCT
CATCAGATTCAGATCCGAGTACCGGCGATGAAGGAGCAGGGTTGCACCTCGAGAGGCGGA
GAGGGGGAGAGGATGTGGATCTGTCTAGCACCAGGCTAGCCGCCGGGAGGAGAGAGCGCA
GAGGCGGAGCCCATCCAATCCCGTCGTCGGTAGCTATTGAGAGGAGACCACGGAGTCGTG
TGTTTTCAGTCTGGACAGCAAGGAGGGGGAGCGTGGAGCATTAGGGGGGAGGAAGGAGCT
GAGAGCGAGGGAGAGAGAGGGCGCGCGGCGCGCACGAGCTGAAGCTAGGGAGAGGCCGGC
GGCGGGTGCAACAGAGGGGGCAGGGAGGGGGGAGGAAGAGGGCTAGGGTTTGGGATGCGG
GTGGGGTTATCTTTTTTTCATTTTTTTCCCCTTTAGATACATGGATGGATGGATGTGAGA
TGGTGAGCTAGATGGATGGATGGATGGGCGCCATGTCATTGATCCGTGGGAAGAGTTCTG
GTTGGCTCGAAAAAACAGTGATTTAAAATAGTTTCCAAGTACTAAAAATAGAGGAATTTT
GTGAAGCCTCTATCAAAAATATTTTTGCAAAAGGGCATCACACAAATTTTCACTAGAGTT
AGACCACATTTTATGGATGAGGACCAATTTGTACGCATTTCTCATCTTTCTAGCTATTTT
TAATCATTTTCTAAAATACTAGTACATATTTAATATACAAAAATGGGTTTTTTGTGAAGA
ACCTACCAAATATTTGTTGCAAAATTGGACTTCATAAATTTTCTAAAATACTACTGCATA
TTTAATATACGATTGACCTAATGGTTGGGTGTCAAAAGCTTTTATCCACCTCTCATGAAA
AAGAAAACTTTTTGCCGATTCAGCTCGAAGCAGGCCAAATTTGAACTAGAGCTGCCTCAT
AGTTTGCTATTTATTTTTTTCAAAAAACATTTCTAGGTACAAAAGTATCTATTTCTTAAT
AGATACTCCAAAATATTTGCAAAAATCAAGCCCTAGCTNNNAACGGTCATACCCGCCGTT
TGGACCGCATTTTGAAATGGGCATGAAAAATTCAAACAAAACAAAAAATTGGAAAACCTT
CGCATCGTGTCATCATATGTGACCAAGTTACCAGGTACAATAATAAACTTGTAATATGGC
AATTATTTTGAAAAACTGTTCTTAGAAATGGGCTATCATGTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNATCAATCTTATGGCCACATTCATGTCATTGTTTGTTGAAATGATCTTATA
TTGTGCACAAGGGTGCGTATTGAAATGGAAAACAATGTTGCCTAAGAAAGTTTTCATTTT
CTTTGGACGGAAAATTCATCTT