Contig Data
morexGenes
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Map Locations of contig_276190 (4111 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_276190

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45065 1 1404 bp MLOC_45065.1 Available Available LOC_Os02g40820.2, FRAME:+1, EVALUE:6e-26, 13102.m04552 protein expressed protein





CDS Structure of MLOC_45065






Contig Sequence (4111 bp)

>contig_276190 4111 assembly3_WGSMorex_rbca.fasta
ATATATCAGAAAATGAATCTTGAATAATCGCATCATATGCAGATTCCTCGTGCTCTCATT
CCATGTTATATATGCTTTTCTCCTGAAGTTTTCATCAACTTCGCTCTGTCCATTGGTATC
AAGTTAGGGAGAAAGATGACATTCTGTCTTCTTCCAATGAACAAGGCTGATGAACAGAAT
GGATGTACATGGTTTTTTCTTGGGGGACGCAAGTAGAAAGTTGTTTCTATGTCTTCTTCC
ATGAAGAGGGTTTTTTCTTCTTCCACGAAGAGGGTGCTTAAGGATACACAACACGTGGAT
ACACATATTGTTGACGCGCGGCCTCTAAGAATTTAGCTTTTTCTTCCATAATTTTTGAAG
TTCAAAAATATATTCACATTGGTTGTTGAAGAGGGAAAAAACGAAAGAAATAGTCAGTGT
TACTACATGAATTGAAACCACATGCCATCATATTTCACATAAAATTCCAAATCAGCACCA
TCATTTGACCAATGTGTTTGAATATCTTTTGTTAACCCGTTGCAACGCACGGGCATTCAA
CTAGTCATATTAAATGTTGTGCTACGATGTATCATGCATGGTAATAAATGATATATCCTA
ATGATATTAATATATGATATTATGCATTACGTGTGTAGTATCATACACCAGTATCATATG
TATGATAGTAGTATATGATACTGTCCATTACAACCAGCCTTAATACGGTTGTTAGTGAAG
CTTTACTTGCTTAATTGATGTGTATAATACAAGAATGAAATGAGGAAATAGATGAATCAT
TTTATGACGTTGTACACACAAGTTCAGGCCTCTTTTAATACACGCGAGTATCTTATCAGA
TAGGCCTTGTTTGATACTAGTGTATTTTAGAGAATTAGTGGGATTATTCCGGTCAAACCC
CTAAATCCCCACATATCTCATAACATCATTTGGTTCTAGTGTATTTGATATGTTTCATCT
CCACATTTCTTCATAAACCCTAAATTTTAGTGTATTTTTCTCAACACCCAATACACTATC
ACTACCTAATGAATTGAAGATAAATAGAGATTTGAAGTAATTGGGTGAAGGTTGAGATTT
CATCCAATTCTATAAGGATTATCCCCACCAAACTTCTCAAAAACCCTAATAGGCCATAGG
GACGACAAACGCTCATGCTCCCGGCGAGCATGTTTGGTGTGTACACCTCGTTGTAGGCCG
CACAATTCCAAGCTCCCCCCGCAGCACACCTACTGCCTCCCTATGTTCTCTCTCATTATG
TTCCCTACGTTTGCAAGAAGAATGGATAAGAAAGGCGTGTCATGGCGGGTCAATGTTACT
TATTGAATCACAAAGTGGTGAAAAGCGATTCCCACATTAACCCATCACGGCGATTCGTGC
AAGTCATCCGACGGTCGTGGTTGTGTCGTGCCTGGGAGGCAATGAGAGAACGTTCTTTAA
TGCAATTGAATGGGCTAATTACTGCCGATAAGCGCAATTGGACGATAATGTTAACCCAAA
TTGCATGCCCACGCAATGCTAACCATATAAAATGACAACCATACCCTCAGTCTGTTCAGA
ACCATTAATTTCCCCTGTTATAAAAAAATCCATTAATTTCCCCCAGCCAGTGGGCGAAAT
CTTACATGATGGCATTTTTGTTATTTACAGCGTACCCGATGGCAACTACCAAACAGCTCA
ATATAAATAGACCACCGCACCCGGCCACCCCATCTTCCCCTCCGCCCAGCCCCATTCTGC
AGAGAGCCCCCTCTCCCTCCTCCCCCTCTTTTTCCACCAAAATCTCCGTTTCGTTCGGTG
TCTTCTCCCTCTCTCTCTCTTCGCCCCGGCATTTTTGCTCCCCCCACCCCACACCCCGAT
CGTACGGATTTGCTCTCCAGTGGGTCCCGCAGCACCCGCACAACTCCTCTTCCTCTGTAC
TCTAGCCTTTTAAACCAGTTTCCTTTTTCCTCCTCATATTTTCCTCGTCCCCCTGCCGCT
ATCGGCGATCCCGTCCGGCCGCTACAGTCGTGGCGGAGGGGCGCGTCGGGATGTCGATCT
GCGCGAGGATGGACGCGCCACGCGGCGGCGCGCTGGGGAAACGGAAGGAGCGGGAGTACT
CGTCTTCGTCGGAGCAGCGGCAGCCGCTGTTCCCGCCGCCGCCCGGCAAACCGGAGCTGC
TGCGCAACAAGCCGCACCAACTGTCGCGGTTCGCCAACAAGCCTCCCATGCCGACGCCGC
CTCCCCAGGAAGGGAGCAGCAAGCTGCTCGCCGGGTACCTGGCGCACGAGTTCCTCAAGT
TCGGCACGCTCCTCGGGGAGCGCCCCCCCGCGCCGGGCCGGAAGGAGACCGCCACGCCGC
GCCCCGCACCCGGACCCGACCCCGCGAGGAGGTACGCCGAGGCGTCGATGCTGCTCATGG
CGGGCGGGACCCGCATCCCCGGGGTTGTCAACCCGACGCAGCTCGGCCGCTGGCTCCGGA
TTAAGGAGTGATGGAGGCACGCGCCCGGCGGCGGTTCGCGTCCAGGTGCGTACCGCGTGC
ACGGCTCCCGAGGCGCCCGACCCGGCGGCGGTGAACCCATGCTTTTGGACATAGCAAGTG
GTGGTGGTTACTTTGCCCAGATCCTTTTCCTTTTTCTATTTTCAGGTTCTAGTTGTTTCG
TTTTAAAAATTTCATGTAGATTTGGTGAGAAACTAGCGGTACTAGAATTTCATGGGGTAG
TAGTAGTACTACTACTATGTGTGTTCGTCTCTACTAATCGTGAGTACTTGTTAACATGTG
TGTTCGTCTCTGCTATGTGAGCTCTGTATCGGAAGGTGTTCGATATGATCTCCGGCTACC
GAGTATTGCCGAACAAAAGCGCATAGAGATGCTTGATAATTGACTGCATGAAATCCCTCG
CCTGCATATGTTCTACTCCTACTGTCCTAGTATAATTTTAGCTATTCCTCCGAGATTAAA
TTGAGCAACGGCGGAGAGTGTCGGCTTTTGTTGGCATCGCGTGTGGAAGCAACTTCCTCC
AGGGAGCATTACGTTCGACGATTGTTCTAGTGATGTGGTTAATTTCAAATTACCAGGCGA
TTTGATCCATGTCCAACTCTGATTTTGCACGGACGCCTCCCACATTGTACTGTGTCTTAA
ACCCAAGTGTCTCGGTTGTCCCTTTATCTGGTGAAGAATCTGTTCCATTTGCTAAGGCGA
TGTACCGCCATGTTTGTCTGAAATTTTGCCATTTTGTTCACCATGAGGTGATTGCCTGTT
CTTATCAGAAAAAGAAAAAGAGGATGAAAGGGTGTCGACCTGGTCACCTGGGCACACAAT
TATGCATTTCTCAAGGAAACCGAAAAGAGTGAAACATGGTATTGGTCTTTGTTCTCATTT
TCTTTTCTGTCCGATAAGTCATTGTTCTCGATTTCTCGTTCAATTTTCGGTCAATTCTTC
TTGCATGCATGGGAGGTGTCACAACAGATAGACAGTTAAATTATGCACGGTCAACCTTTG
GACTTTTCTGCTACTGTGTTAATTTGGCTTACAAAACTGACGCTGGCAAAACATTAAAAC
CTTCTGTGCTGGGCTCCTTAAACTTGCTCCGCCATTGCTGAAGGAATTCGAAGGCTTGCG
TGGGGTGAAAGCCGGGCAAGACCGGCCCAGACGTACTACACGCTCGTTGGGTGTACGTGG
TCCTAGGAAGACGAAAGCTACGGCTGTTGAGCCCGTGTTACTCAAGATCTTGGGTTTTGA
CTGCGATGACCTGGCCGTCTCAGAGGAGACCTTGGGTTTTGACTGCGATGACCTTGCCGT
CTCAGAGGACGCCATGGGCCTGCTCTGGACCGTCTTTGACTCTCCTCTCCAAAAACCGCA
GCTCAGGGCCATTGCGGCCATCTTCGGAAGGCAATACCCCTTAATCTAAACGATGAGCCC
GAGAGGAATGGGCTGACGCCAGTGATGTGGCTGCAATTCTGAAAATTAAAATTCCGATAA
GAGCTGAGATGGAGGACCATGTTGCGTGGCATTTTGATCCTAAAGGCAAGTTCTCAGTGA
AATATGCGTACCAAGTGGGAGCCAGGTTACGGGATACGAAGCTGTGTCGCGATGCGGGGA
CCTCTACGACAAGTGGAAAGGGAAAGGATGA