Contig Data
morexGenes
Links



Map Locations of contig_276113 (5852 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_276113

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45046 1 2331 bp MLOC_45046.1 Available Available LOC_Os03g16860.1, FRAME:-1, EVALUE:0.0, 13103.m02005 protein DnaK family protein, putative, expressed





CDS Structure of MLOC_45046






Contig Sequence (5852 bp)

>contig_276113 5852 assembly3_WGSMorex_rbca.fasta
ATTCTTGCGAAACCACGAGATGCGTTTCTATCCCNNNNNAGGCCCTCGCGCCAAAAATAA
GGACATGACCGTATCTTGGGCATTACAGGGATATAGATCACCCTGTTAACGGGGACGCAA
TGGATAAATCACTATTTTGTTTGGTTCATGCCTGTAAAGGAATTGAGTTAGGGCATCTTC
GTCGGGGTTGTCGCCACTGGTGGCTGAAAAACAAGAAAAACATACAAGGGACGAGGACGG
AGGACGAGGAGAGGACAGAAGAAAGGGGCGAGGATGATGGAGGGAGCGTGTAGCTTGCAG
GGAACGGTCCGACGACAAGGGCGAGCTAGGGCCACAGGAAACGGGGTAGTGACCAGAGGT
GGCGGCGATGGCTACCAGGAGACGGGGCCATGAAAAGAGGAGGAGGAGCACGTCCGGTTA
CTCGCCAGCCATCAAAGACGGGAGGAGTCGGCTCGCCTGCGACGACACTCGGTTCTTTCC
AGAGGCAGCGGTGCTGGTCGAGAGGAGGGGATCCTGGGAGGAGAAGCTATGGTAAGGGAA
CCGTTTACCAAGGGGTATGGCTGGTATCTATCTAGAGATAGCCTGTATTCGTTTACCGGG
GCAACCGATTACAGCATACGGGAAACAAACGCGTGTAACATCTTCTGATTACACCGTAAA
TAGATAACTGTGGTTTCTCGCCAAAACAAACACCTAGTAAGGAGGTGTTTGGATTAGAGA
GTGGTAACATAAATGGTAAGGGATATATATCACCCTGCTAACCAGGATGTAATGGATAAA
TCACTGTTTTGTTTGGTCCATGCCTGTAAAGGAATTGAGTTAGGGCGTCTTCTTCGAGGT
TGTCGCCGCCGGTGGCTGAAAAACAAGAAAAACAGACAAGGGACGAGGACGGAGGACGAG
GAGAGGACAGAAGAAAGGGGCGAGGAGCAGGGAGGAAGCGTGTAGCTTGCAGGGAACGGT
CCGACGACAAGGGCGAGCTAGGGCCGCAGGAAACGGGGTAGTGACCAGAGGCGGCGGCGA
TGGCTACCAGGAGACGGGGCCCCGAAAAGAGGAGGAGGAGCACGTCTGGTCACTCGCCGG
CCATCAGAGACAGGAGGAGCCAGCTCGACTACGGCGGCACTCGGTTCTTTCGGGAGGCGG
CGGCGCTGGTCGAGAGGAGGAGGGGATCCTGGGAGGAGAAGGTATGGTAAGGGAACCGTT
TACCGAGGGGTATGACTGGTATTGATCTAGAGATAGCGTGTATTCGTTTACCGAGGGAAT
CAATTACAGCGTATGGAAAACAAACACGTGTAACGTCTTCCGATTACACCGTAAATAGAT
AACGGTGGTTTCTCCCCCAAACGAACACCTAATAAGTGTTTGGAAAGATGAAACAGTCAA
TAGAAATTATTCCATGATGACCTTCTTGAAACAACCTCAGGATATGATGAACTGATAAAA
GAGTTAAGCAGACAAACACAACATACATGGTCAATCATCACGTTAGAATAATGAGCTAAG
ATGATTAAGACATTTTTTGTTACACAAGTCTTACGAAAGAAACATAAACTGTCCATATAT
GTCAAAATCCAATTTAAGATTAGTCAAAACAAGTTGCATATACGAATTCAGTACAATAAC
TTCTCAAGTAATGTAGAATTGTCTGTGTTCCCAAGTATCCAGAATACGTGAAAAGGTAAA
AGAGCTTGAGCACGAAAACAGATGCATTGGTCCGAAGAATGGCAGCCAACAAACCTTTCT
AAGAAAAACTGCGGATGGATGCACCACTGATGAAATTTAGCAACAATTCCCATTCCAACT
ACATCTCAGGATGTAAGCTTTTTCTTTACAGACAGCAACACAAGTCGAAATAAGCAAAAA
CGAATAGAAGCTTGCAAAACGATCTTATAAACAGCTTGCATAACGATCTTATAAACAGCT
TGCATAACGATATGTGCGGGACAGAGGGGGTAGTTCTCAACTTCTCATTGTCTGCAATTC
AGAACAACTAGAAAGCAGCTTCGCCATGTTTTGACTATTGACGGAAGAAAAATACTCCCT
CCGAGTACAAGTTTTCAAGAAAGAACAGCTGATTGTAATCCCCCTACTGATTATTATCAG
AGTTGAAAATGGTTATATATTTTTTCTAAAGAGGGTTCAAGCATTTTCATCCACAAGTTC
AGAGGGTTCAAGCATTTTCATCCACAAATTTAGTGAGTTGTGATTTAAGTTCGCCTGTCC
AATTGTGGCATGCATGTTAAAATGTGATGCAAGGATGTGTAGTTTTGCATGTGGGCATTT
GAATAGTTATGTGGTAAAATTGAATGGTAATCGTGTATGTGCTGAGATAAACGATCAAGA
TCCATTTCACATGATAAATGTTTAATTTCACGGGATGAATTGGTAAACCGCCAATAATAA
TAAATAATATTGAAATTGGTTTTAACCCTTCCTTCCTGTACTAACTTTGGAAAATGAAAA
GAGAGACTTAATCCCAAAGATTAACCTGAATGTTTCAGAAGCAATTGCTCCACAACAGTT
GCAACTAAACCTTTTCCCAAAGATATTGCAACAACTAAAGATTCATGACAGGCTAAGTTC
AGCAACCGAGCATTCAAAGCTAAATAAAAGTGAAATAACTGCAGATAAAAAGTATAACGT
CTTCTGTTACTATTTCAAACGTAAACATAAGCTGGGGCAACGTATATATGCCCGAACGAA
AAATTGCAGAACGATACTAGAATCCACCGTACAGTGAAAGACATATTATTCCAAGCAACC
ATGGTGATCTAAATCTATCATTTAGTCGACCTCCTCGATCTTGGGCCCTGGGCCGCTGCT
GCCGCCGGCGGCACTGGCCGGAGCATCCTCGTCCATGCCACCGGGCATTTCAGCCCCGGC
TCCCTGGTACATCTTGGCGATGATGGGGTTGCAAATGCCTTCCAGTTCTTTCATCTTGTC
ATCAAACTCGTCAGCCTCGGCGAGCTGGTTGTTGTCGAGCCAGGTGATGGCACCCTCAAT
AGCGTCCTCGATCTTCTTCTTGTCAGCCTCCGGGAGCTTGGAGGCGATCTTGTCGTCCTT
GATGGTGTTACGCATGTTGTAAGCGTAGTTCTCCAGGGCGTTCTTGGAGTCCACCTTCTT
CTTGTGCTCCTCGTCCTCAGCCTTGTACTTCTCGGCCTCCTGCACCATCTTCTCGATGTC
CTCCTTGCTCAGCCGACCCTTGTCGTTGGTAATTGTGATCTTGTTCTTCTGCCCGGTGGT
CTTGTCCTCCGCCGAGACGTTCAGGATACCGTTGGCGTCAATGTCGAAGCACACGGTGAT
CTGGGGGACGCCCCTGGGAGCCGGTGGGATCCCGGAGAGCTCAAACTTGCCGAGCAGGTT
GTTGTCCTTGGTCCTCGCCCTCTCGCCCTCATACACCTGGATGAGCACGCCGGGCTGGTT
GTCAGAGTAGGTGGAGAAGACCTGCTCCTTCTTGGTGGGGATTGTCGTATTCCTTGGGAT
CAGGACGGTCATGACACCTCCGGCCGTCTCCAGGCCCTGCGAGAGCGGTGTGACGTCGAG
CAGGAGCAAGTCCTGCACCTTCTCGTTGCCCTCGCCGGTGAGGATGGCAGCCTGAACGGC
GGCTCCGTACGCGACGGCCTCGTCAGGGTTGATGCTCTTGCAGAGCTCCTTGCCGTTGAA
GAAATCCTGGAGGAGCTGCTGCACACGGGGGATACGGGTGGATCCTCCGACGAGGACAAC
ATCGTGCACGGTGCTCTTGTCCATCTTGGCATCGCGGAGGCACTTCTCGACGGGCTCCAT
GCACTTGCGGAAGAGGTCCATGTTGAGCTCCTCGAACCGAGCACGGGTGATGGTTGTGTA
GAAGTCGATGCCCTCGAAGAGGGAATCGATCTCGATGGTGGTCTGGGCGGTGGAGGAAAG
CGTCCTCTTCGCCCTCTCGCACGCTGTCCTCAGCCGCCGGAGCGCCCTCGGGTTGCCGCT
GATGTCCTTCTTGTTCTTCCTCTTGAATTCCTGAACGAAGTGGTTGACCATCCGGTTGTC
GAAGTCCTCACCTCCCAGGTGGGTATCTCCGGCAGTGGCCTTTACCTCGAAGATACCCTC
CTCAATGGTGAGGAGCGAGACATCGAAGGTACCGCCGCCGAGATCAAAGATGAGCACGTT
CTTCTCGCCGACGCTGGTCGACTTCTTGTCGAGACCGTAGGCGATGGCGGCGGCGGTAGG
CTCGTTGATGATCCGCATGACGTTGAGGCCGGAGATGACGCCTGCATCCTTGGTGGCCTG
GCGCTGGGAGTCGTTGAAGTAGGCGGGGACGGTGACGACTGCGTTCTTGATGGTTGTGCC
GAGGTAGGCCTCGGCCGTCTCCTTCATCTTGTTGAGCACCATGGAGGAGATCTCCTCGGC
CGAGAACTGCTTGTCCTCGCCTCTGTACTGTACCCCGATCATCGGCTTGTCAGCGGGGCC
GGGAATCACCTTGAACGGCCACAGCTTGGCGTCACTCTGCACCGACGCGTCCGAGAAACG
CCGGCCGATGAGCCGCTTCGCATCTGCAAACAAACAGGAGGACACGGGCTCGTTTAGATC
TGTGCCACGCGGATCTCGATCTGCTAACGACATGAAAACAGAGGACTAGAGCATAACAGA
CGGATGTGCTTACCGAACACGGTGTTGATCGGGTTCATGGCGACCTGGTTCTTAGCGGCG
TCGCCGATGAGCCGCTCGGTGTCGGTGAAGGCGACATAGGACGGCGTGGTGCGGTTGCCC
TGATCGTTGGCGATGATCTCCACCCGGTCATGCTGCCAGACGCCGACGCAGGAGTAGGTC
GTGCCGAGGTCGATGCCGATCGCCGGCCCGTCTCCTTTTCCGGCCATGATCTCGTCTACA
ACTCAAGCGGAAAAACAACCTCGAAGGGAATTGCGGGATTGGTTGGATCTTGGATCGGAG
CACGCGGGAAGGGAGGGAGAATAGGTGGTGTACGAGGCAGAGAGGCGATGCGGGGTTGGA
TTTAAAAGGCTGTGGTGCCCGCGTCCGGGGATGGGTTCTAGAAAGTTCCTGTGGTGGGCG
CGGCCGTCGGATGCGATCTGGACGGACAGGAGGAAGCCGCGGCGTCGTCGCGGGCGTGGG
GACGGGCGAGTCGTGGCTGGTTTGGACTCGGCTCCAGGGTGTGGGGTTTGGGTTCTGGAG
AACACGGGAAGGTTCTCGAGACTGGCAGGGGGAGACATTCCTACCTTTTGTTCCAGACTT
GTGGCCTGGTTGGACGGCATCCATTGGTTCGTGGCTACAACGGCGTGTACAGGCCGTTGG
AGACGAGCGGTGATGGTGACAATTTTTTTTTCGAGAGTACGCCAATGGCATATCATATTT
TTATAGAAGGCAGAAAGAATATTTACAAGACGCTAGCGTAGAATGCGAACATTCAAGCCA
GCTAACTCCATACAAACAGACTAAGGCTACTGTCTCACAAAACGTTGAAGACCTCCTACT
CCTATCCCTGCAGTCCTAAGATCCTGCACCTCCTTCCCGATTTGGCCCAACAGTTGCGTA
GGGTTCATGATTTGCCACGGCCTGTTAAACACCCGGGCATTTCTCTGCTTCCACAATGCC
CAGGTCATGATAATTACCAGTGTATCAAAACCATGCCGCTCGGCGCGCCTGAAGTGCCCC
TCGCCCAAAGCCACCATTCCGTCAATGTATCTTGAGGCTCCGGAGTCCTGATTTGGATGT
TGAGCTCTTGGAGATCTAAGTACCACACCTCTCTTGCATATACACATTGGATCAGAATGT
GCTCGATATTGTCTTGGTCCTGGAGGCAAATAAAACAAGGAGAGGGGTGATCTTGCAATC
CATGTCTGGCGCGGCGATCCGAGGTCCATAAA