Contig Data
morexGenes
Links



Map Locations of contig_276057 (4155 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_276057

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45029 1 1071 bp MLOC_45029.1 Available Available LOC_Os01g04360.1, FRAME:-2, EVALUE:5e-70, 13101.m00395 protein hsp20/alpha crystallin family protein, putative, expressed





CDS Structure of MLOC_45029






Contig Sequence (4155 bp)

>contig_276057 4155 assembly3_WGSMorex_rbca.fasta
AGGAAGCAGGACATCTAATCTAATCTCATGGATCCCATCACCCGCATCCAATGGCGCATA
GGCAGTCTGATGGATGCTAAACACCTGTAGTCTGATGCCTAGCGCTCGCCTTTATCTAAA
TACTTGTTGTTGTTATTGGAGAGAACAATACTAGTTTTCTCCAACAACAAGTATTATGAT
ACGGAGGAAGTAATAAAGAAAGAAGTGACCTTGCCCATCCGTCGCATGAACTGTGCCTTG
CGTGCTAGAAAACACACAGAGCGCCTGTTGTGGCCGGTGCATGTACGAGCGACCTGTTTT
TTAAATTTATATTTTTTTTGTTTTTATTATTCCTCATTGTTTTTCCTACTTTAAGTAATT
TAGGAATTCAAAAAATTACCGAAAATTTTAAAAACTGAGAATTTAAAAATATAATGTTTA
TTAATTCATAAATATTTGTGGATTTAAAAAATGTTTGCATATTCATAAATTCGAAAATAA
ATATTTACGTAATAAAAAAATCTTGATTTAAAAAAGATGTAGATGCAATTGAAAAACATC
AAGTTCGAAAATTGTTTCACTAATTTCCAAAAAAACATTTGTCGACTATAGACCTTTCGC
CGATTAAGAAAAAGGGTTTACAAAATGTTCGCATTCTTATAAGAAAATGTTTGCAAATAG
TCTAAAATCTTCATGATTTTAAAAAATGTTTACGAATTTGAAAGATGTTCAGATTTCAAA
TTTGTTCACGAGTTTTATTTCATGATTTCACAATTAATATACGCATCTGCGAAGGGGTAA
TGCAGTATTTTTAAGATACTTATTGATCGGATGGTTACTTTTCCATCTAACCAAACGGAA
GCTAACGATCATCTCGGCCGCCGCCGCGACCACTCCTTGCACCGGACCGCCGGTGATGAC
GACCTGTGGCGACGTGCATCGGACCACCGGTGATGATGATCTGCTCGCTGTGCCTCACGG
AAGCAGTGGCGATGTGCCCTGCGACGGGTTCCCACTACCGCGCTCGCCACCCAACACCTC
AATGCCGGCCCGACGGAGATCCGGCAGCGCCCCACTACCACGTTCGCCACCCAACCCAAC
TTGGGAACGCCGGCTTCGTCCGGGAGCCAACCAATTCCTTGTCGCTGAACGCAGTGTATG
TTGGCAGATTTGCGGTCATGGTGATATTCAGAGAACTATGCTCATAAATTCAGAGAACAT
TTATTGATGTTAAAATTCAGAGATGTTGAGCTACTCCAAAATTCTACTGGTAGTACGTAA
AGTTTCATTTGTATAGCAATATTTGTACGTAAAGGAATGGAATTCCAGTGTCAGCCTTGT
GACTGATGAATGAACACAAATTCGGACTGGATATTAACATCGGCCAACAAACTGAATTCC
AGCAGCAACATTTTAATAGTTGTCAATCCTTTGCGGCGATGCCGATCAGGATCAAGAGCT
GAAATGAAAGCTGGTGGCAATGCCGATGAGGACCATCAGTGCAGATAGCTCTACTCCATT
TAGAAGTGCCGTGCGAAAGAAAAGGGATGGGAAAAATAACGACTGATGAATGAATACAGA
TTAAGATTTGGCAAAAATAAATGGGATTCCAGTGCGAACGTCCTGAGTATTAAACAGGAA
AAGATAATTTCAGTCATGAGAGTGCAACATTACATACTCTATATTATTTCAGTTCTGAAA
GAAACACTATATATCGGAAAGGAGGGAATGCCATTTTTCTGTCGATCCTGTCCATCCCAA
CCACAAGCAAAAGGGTAAAATTTTGCGTATGCAAAATCTGCACCGCAGTCAAGATCAGAA
CGATTTATCTCTCGTTTATTCATGGTCAAATCTGTTGGCGATTACACATGTACATAAACA
AGTGGGGAAACAAACGCAATACAGTACAGAGACGTCTCACCAGACTCGGCAAGAGCAGGA
CACAACTGTAGCATATATACTTTCAGGTTGCAGAACTCGCACGCACATCAACCAAACTGA
CTCCAATCCGGATGATCATACGTCGAGGCACATGCATGCGCTCAGCCGGAGATCTCGATG
GCCTTCACCTCGGGCTTCTTGACCTGGGCCTTGGGCACGGTGACGGTGAGCACGCCGTTC
TCCAGCCCGGCCTTCACCTCCTCCACCTTGGCGTCCTCCGGCAGGCGGAAGCGCCTGACG
AACTTGCCGCTGCTGCGCTCCACGCGGTGCCACTTGTCATTCTTGTCCTCCTTCTCCTTG
GTGCGCTCGCCGCTGACGACGAGCACGTTGCCGTCCTCCACCTCCACCTTGACCTCCTCC
TTCTTCACTCCCGGAAGGTCGGCCTTGAAGACGTGCGCCTCGGGGGTCTCTTTCCAGTCC
ACCCGGGCGCTGGCGAACGCGGCCGTCTCGCTGTTGCCGCCTGCGATCGCCGGGGGGACG
ATGGAGCGGAAGGCGTCGAAGGGGTCCGCCCAGAGGCCGGCCAAGGGGTCGAACACGTTG
CTCCGCCTCACGATCGACATTGTCGGTGTTGATTGATTGCTTAGGCTTGTGCGCTCGGAA
AATTCTGTATCGGATCGTTGGATGCTGCTTGCTTTTGCACTTGGCACTGGCTTGGGTTGG
GATGGCGGTCGATGGGAGGTGAGTGAGCTACTCATAGCGTCGCAGGTGCTGCTCTTGAAG
CATCTCGAGTAGCCTGCAATCAAAGAGCGTTGGGTTATTTTTGGCTTGTCAGCTCGGCTG
CACGAGCTTCTCTTTTCTCTATTTTCAGCACATGAAGGTTCTGGAGTGCTCTCATCTGTT
GGAGTTTCCATTATTATTTCTCTATACAGCTCTGGAATGTGATGGCGCCTTTTCTACAAC
AAGACATGGCCAACTCGAGATGCCTCACGAGCGCACCGACAAACAGAGTACAGCCGTTTC
AGAGTTGCTGAGAGCATCTTCAACAAACGCACAAAAATTCCACGTCCTAAAATAGTTTTA
GCACGTCACTGTAGCAACTTTAGTGCGTCGGGAACAACATTGCTTTAGCAGATGTCAAAA
AACGCACGTTCAAAAAAACCTGCAGTGTAAACTGTGAAGCGCGCGCAATCCGGCGTCCAG
AATATGCTGCGCGCGATAGCGTTTTTTAGCACGTGCACAAAAGCTTTTAACGCGCGCACT
GTTTTACAGCGTCTGTTGGAGCTGTCCAGGGCCCAAAAAACGAATCTTTTAACGCGCGGA
GCAGTTTTTAAACGCCTGTTGGAGATGCTCTAAGAGAGGACGGAGATGTCGATCGTGAAA
ATAACTAACGACTCTGTCCGTTTATTGTAGTTGTTGTGTCAGCGCATCTTCAACACCCAT
CTCAAACCGCACTACCTCGAAAGCCATCCAACACAATGTTATATAGTACTCCCTTCGTCT
CAAAATAAGTGGCTTAAAATTAACTCAATTTTGTATTAAAAGTGATGTAAAGTTGAGTTA
TTTTTAAGTCACTTATTTTGAGACCGAGGGAGTAGATCATTGGACGATTCGAATGTATTT
TTTCCAAAAATTGAAGACAAAGTGAAGACTTTGCTAGCGTTTGAACGGCTGCCACTTTTG
CAACTATCCCTCACCCGTCATTAACCCCCTTCCTCGCTTGCATGCTCCCTGACCAAAACA
GTCAGCGCCGTTCTAGAGCGTCAGTGTCATATTCATGTCCGGTCAGAACGAACGTGACCT
CTTACTGTTGCCGGCATTCAAGCGGCTCGCCGACGCCGCTTCTTGATGCAGGCGACTATT
TTGCATTCAAGTGATACTCCGTTGTTTCCATCGCCCTGCAATAATGATATGATGTTGCGG
AGGAACCTACTCCGACGCCATGTGTCAATTTGTTTGACGCCCACTATTAACCACACCTCC
GCTGGCCACTATCATCCGTCCACTATGTAAACTTCATTCCTAGTCACAACCGCAGTCATC
CTCCTCCGGTAATTTCTCCTCATGGCACCACGCCTGCCACACCCTCCTCGCGCTCTAAAG
CCCTCTAGGAGAACCTCTCGTCCGAACAAAAGAAAGAGATTTTTTTTCTGTAAAGGAGGA
ATACCTCTGTCCTCTGCATCAGTGTGATGCATGCAGTCATATTATTAGAAAGCGATTCAA
CCAAAGTGTGTCATACTGTTGGGTAACGTAGCATAAATTCAAAAAAAATTCTACGCATAT
TCAAATCTTCCTATG