Contig Data
morexGenes
Links



Map Locations of contig_276019 (2985 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_276019

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45023 1 611 bp MLOC_45023.1 Available Available LOC_Os11g08330.1, FRAME:+1, EVALUE:2e-46, 13111.m00877 protein POLD1 - Putative DNA polymerase delta catalytic subunit, expressed





CDS Structure of MLOC_45023






Contig Sequence (2985 bp)

>contig_276019 2985 assembly3_WGSMorex_rbca.fasta
TCGTCGGGTTTAAGCAAGCGTAGTTGACAAAAATCTATACACACAGTTGCCAAGTTGACA
ACTAAGTTAATTAAATATGGCTACTAAGTGTCTCATAATCTTAACAACTAAATAATAGTA
ATCTGGCAACTATAAATGAAAAAAAAAGTTGTCGAAACATGTCGACATGGATCTAGTTTA
GAAGATCTCGTTGCGAGAAAGCTAACGGTGAAAACGGATCGTCAATTGGATTTGTAGTTC
AAGAGATGAAACTTTTTGAAAATTCAACATTAAAAGAATCATGGATTAGCTTGCATGTAT
GACGGTAAACCACCGCACGGGAAGGCGCTCATGCGGCGCAGCTATATACTATATAGTGGC
TTCCTTCATTCTAATATTCCTATTCCAGCAGTAAAACCATAATTTTACTACCTTCTCTGT
AATGACCCAGTCTTCTAACCGACCCATTGTCACCCTGCAGTGGTCCTAACCAAACACTGT
GCTCACATTGCAAGGGAAGGGAAGCAGAGTTATACTGCAAAACAGTAGCAAATGGTAGGA
TATCAATCCTCTGAAATGTTTCTCAAAATGGTAAAAGGCACTGTCTCCAAGCGTCTGATG
ACCCACTGGTTTATCTTTAACATCCACAGTTTCTGATCTGGAGATGCTCTTTGGGAAGCT
ATGGACGCAATGCCAGGAGTGCCAAGGCTCCCTACACCAGGACGTTCTGTGCACCAGGTT
TGCTCACTAAAATTTGTTCACCAGCACACTCTAATCTTTGAACTTGAACCAAAAGCTTAA
AACTCCTGTTGGTATCATACCGTTGTAGTCGGGACTGCCCTATTTTCTACCGGCGGAGGA
AGGCACAGAAGGACATGGCTGAAGCTAGGGTGCAGCTTGACCGCTGGGACTTCTGAGTCC
TCTAAATGCTCTGAAAACTGGCAGCCTCCGCCAACTTGTGAGGGTGTAATTGCAAATGGC
ACGCTGCTGCTAAGATCACGTAAATGCATCATGATGCATGATGGGCCAGGGCTACGGTTG
GAGATCGGCAGTGTTTGCTCTGAGTTGGAATGGGGTTTGAGGTAGGCCCTTGTATGGTTC
ATGTGTGTGTCTGCTTAGTTGGGCGGAGTATCAACCCTGCAAGACGGTTAATTGCTGCCT
GCCTAATTGTGCCGGACTGCTGATGCGTAACTAGAAGTAGAACAACTCATCTTGTAACTT
GGTCAGAACTTGTATGTAGCACATGTTTTTGTAATTTGTCCTGCCCAATTATATTTGAGA
AAAGATTTAAAAAAATCATTTGTGTTCTACATTATGCATGAGTTTTTTGTTTGTTTTGTA
AACTTGGAGAGTTCCTCGAATTGTTGATCCTAAAATATCTTGATTGTGTTTTGGGAGTTG
TGAAGACGAAGGAAGCACATGCATGCAGAGCTGGGCGGGAGCTCTTTTTTTTTGAGACAA
TCTTGTGAAGCTTTATTTAACCGTGACCAATGTTTATAGGAATGAAAGAAAAATCATCGG
GATTGTCTAACCACAAATGATGGCTAACCCCTAACCTAATGACACGCTTCATTAAATTGC
TAGTCTCGAAATCCGAACTCCTAAACTCATGAACAAAAGTATAGGAGATAAATGAGTTTT
CATGATCTATAGTTTCATGCAATATAACTTCATAGTTTAACGGATTCCCTTGCTTGATAT
CATCCGCCAGAACCTTGCAATCTAAAACCGGGCGGGAGCTCTTGTTCAGCTTCTTTAGTG
CCGGAGCTGAAACCGGACGGGAGCTCCTGTTTGGCTCCTTTAGTGCCAGAGCAGGTTCCT
CGCGCCCATGCGAGAGCTTACTGGACCTTGGCCCAAAAACTTCCTCACACCTTAAAAAAA
AAAGGATTGCAGGTGTGCGTTCCTGTTGAAGAACGTTGTATAGGAAATCATTTTTTTTCT
ACGATCATTAAGATCAATCTAGGAGATGCACATCTATGAAAGGAGAGATTGAGTCTACAT
ACCTTTATAGATCGCTAAGCGGAAGCGTTAAAGAAAACGGTTGATGTAGTGGTACGTTTT
CGCGATCCTATCACGATCCGTCCCACGAACTCCCGAGCGACGAATGGACAACACCTTCAC
GTTCAGCACACATACATCTTCCAGCAAGCAAGGGTGGAGTGGTAGATGAGTTTCCCGACA
ACGCGACGGCGTGACGGTGGTGGTGGAGTAGTTGTTCCGGCACGCTTCGCCAAGCAACAC
CGAGAAAACTAAAGGAGGACACGATCTAGAGGGAGGGGCTGCGCCGTGGTGTGTGTGTGT
TGCAACCCTCCCTCCCCTCACATATATACGGGGGGGGGGGGGGGGTGGCCGACTCGACCT
AGGGTTCCCCCCTCAAGGGGGGTGACGGCCAAGGGGTGGGGCGTGGCGGCCCCATAGGGT
GCCTTGCCACCCAAGGCAAGGGTGGTCGGCCCCTATGTGGGCTTAGCCCCCACCTTCCAC
CGCATGGGCCTTCTTGGGAGGGGCGGCCAGCCCACCAGGGGCTGGTGCACCCCCTCTCAC
AGCCCATGGTCCCTCCGGGGCAGGTGGACCCCACGGAACACTTCCGCACTCACGTCACAA
AACCGGCATAACCCGAAACTTTTTCGGACTTCGAATATCAACTTCCTATATATCAATCTT
TACNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTCCGGGATCTCATCCGGAACTCTAAAC
AACTTTCAGTGTCCAGGATCTCATCCGGAACTCCGAACAACTTTTAGTTATCACCACACA
TAACTTATTAATACCAAATCGTCAGTGAACCTTAAGTGTGCAGACCTTGTGGGTTGGAGA
ACTGTGCATACATGACCAAGACACCCTTCGGTCAATAACCAATAGCGGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCGAACCACAATGTCAAGGAT
TCATTCAATCCCGTATACAGCTCCCTTTGTTCATCGGTATGTTAC