| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_275925
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4500 |
5 |
6161 bp |
MLOC_4500.2 |
Available |
Available |
LOC_Os06g49390.1, FRAME:-2, EVALUE:0.0, 13106.m05282 protein NBS-LRR disease resistance protein, putative, expressed |
| MLOC_44991 |
1 |
1447 bp |
MLOC_44991.1 |
Available |
Available |
LOC_Os07g26660.1, FRAME:-1, EVALUE:2e-131, 13107.m02644 protein aquaporin protein, putative, expressed |
CDS Structure of MLOC_4500
CDS Structure of MLOC_44991
Contig Sequence (4084 bp)
>contig_275925 4084 assembly3_WGSMorex_rbca.fasta
GGGGCGGAGGAGATGGTGGAGGGCGACTAATGGGGGCCGGCGGGGGCAGTGATTGTTGGT
GGGGGCGGGCGGCGGCTGCTGATGGTGGGGGCCGACGGCTGCGGGGGCTAATGGGGGACG
GTGGTGGCTGCTGCTGATGTGAACCGGTGGCGGCGACTCTTGTTGGGGGCAGGCGACGGC
TGTAGATGGTGAGGGTCGACGGTGGCGACTGCTGTTGGGGGCTGGCGACGACTGCTGATG
GTGGCGGCCGACGACCATGGGTGCTGATGGGAGCCAACGGTGCTTGTTGCCTCATGGGGG
GCGATGGCGGCGACTACTCATGGGGCCGGCGGCGGCGTGCGGAGTGGTGAGCAACCCTAG
CTATCTCCTATGCGTGTGGACGAACCCGAGGGCAACGACATGGGGCTTGGTGGCATTCTC
GCTGTAAAATGTGCAACAAACAGGGACATTTTGTTGCACCCGTCGGATTGTAAGTGGGCT
TTCGTGGGAAGCTACCCTCCCCAGCCATTTTTCATTGTGAAGGAAGTGAGGATGGAAATA
AGCTATGGCCGCTTCTTCAATGAAGCTTATTTTTACAAGAAGCTGCGAGAAGCTCCAAAA
GAACTGGCCCTTACTATGCATTGCACGCAAGGTAATTCATCGTTAATTTGGCGCAATTTA
TATATATATGGTCTGACACATTAATGCATGCATCAAATACAGATTCAATTCGAAATTTGT
CCATATTCACAACCCTGTGCTACGTGGTACGGTGGTCACTGCCCCCAGCCTCGTGCGGTC
CATATTTCATCCATTCATGGATGCATGATTTTTACTCCCTGTATGGCATACATGTTTGAT
GTTGATGAATGACGTAAATTACATCGAACAGCTTTATGTATGTAGTTTCAAATTAAACTT
TTGGGTTTAAAATTAAAACTACACAGGAAAATATGAAAGATTTCAGTAAAACGGAAATAT
TTTTTATTAGTGACCGGCCAATCTGGTTAAATTTAATATGAGCTAGGAGTAGGGTTTGAA
AATATATTTAGTTTTAACTTATAACTGAAACGACATAGACAAATTTGAATTTTTGCAGTG
AGCAATCCTTCAGCGTAAAATGTCAAATTATAAGGAGAGTAAACAGAGATGTGGTGACAT
GACACTGCTGATTACGAAAAAAAAAAACCGGCACCAAAACCCATAAAATGAAGAATAAAA
CGGTTGCAAAGTGAAAGGTTTCAAAATTCAGGGAGAGTTACTAAACCAAACTAAATGGTA
AGGCCGGAAAGTGAACACAAAAGTACAAAATTACTGGGAAGTAGTGTAATAACTTGGTTT
CTCTCAATAGAAATTCATCTCTTGCATTAACTAAACTAGCGAACAATGTAAAGCCAACAC
TAACATACAATACAACTCATACGATTCAGTAACGAAACAACATACTCGTACTTAACAATG
GATTTTAGCAGCCACACGTACGCTGGATCCATCCATAATGTGGATCTCGACTCATCAACT
ACTCCAGTAGATATGAAACACATTAATGGATGGAAGTAGCTAGACGGCGGCATCGTAGTT
GGACCGGAAGATGGCGCTGTTCCTGAGGACGTACTGGTGATACACCATGGCCACGGCGGA
GCCGATGAACGGGCCAACCCAGAAGATCCACTGCTCTCCCCAAGCTTTCTTGTTGTTGTA
CACCACGGCGGCACCAAAGCTCCTCGCCGGGTTGATCCCGGTGCCGGTGACGGGGATGGT
GGCGAGGTGCGCCATGAGGACGGAGAACCCGATGAGCAGCGGCGCCAGCACCGGGACGTG
CGGGTCCCGGGCGATGCGCTTCGGGTCGGTCGCCGAGAACACCGTGTACACGAGCACGAA
GGTGCCGGCGATCTCCGCGATGAGCCCCGCCATCCTGGAGTAGCCCGGCGCGAGCTCGTT
GGCGCCGCCTCCGTAGAGAGCGTAGTGGTGGCCGCCGTGCACGGCTCTCACCAGCGCCGC
GCCGCAGATGGCGCCCACGCACTGCGCCACCATGTACAGGAAGGCCCTGGGAAGGGAGAC
CTTGCGCGCCAGGAGGAGGCCGAAGGTGACCGCGGGGTTGATGTGGCCGCCGGAGATGCC
GGCGGTGCAGTAGACGAGGACGGCGATCGTGCCGCCGAAGGCCCACGCGATGCCCAGCAC
GCCGGCGCCGCTGCACGCCTGGGCGTCGGTCTGGCGCTTGTGTCCGACCACGGTGGCCAC
GGCGACGTAGACGAAGAGCAGCGTGGCAGTGAACTCAGCGATGACGGCACGGTACAGAGA
CCACTTGCCCAGCTCGCCGGCGTCGACCAGCGGCGCCGGAGGAGGGTCGAGGTAGTCCTT
GGCGCTGCCGTTGCTGATGACTTCGTTGTCGATGGCATCCGGACTCAGCTTGCCTTGTGC
TGCGGCCATAGTCATGAAGCTAGTTAGCTCCTCGATGGATCGATCTCAGCTGATTAATCT
GCAGTGGCGGAGATTGGTACGTGTCCATAATTCGGCAAGGATGCATGTATATATAGAGCA
TCACTGAGAATATGTGGGTGCCCTACCGTAGTGCTAGTGCCACGCACCATTTGCATATTT
TTACTGCGACAAGTGCCATATATACCCATCTTTTTTCGTGCCGCGCGGCAGAGTTTTTGA
AGAAGTGAATATCTTAACATAGATTTGTACATTTATTATTTTTGCCTATGTGTAATATAA
AGTTAGCCAAAAAATGCTACGATGAGATCGATGTACAACTACATGATGCTTGCAAGGTTA
ATTGATTATAAAGTTGCAAAAAATGCTACACCTACCAACTGCTACGTAAATTACTTACTT
ATGAAAAAGAGGTTTCCTTTCCTAACGTTCACTGATCTCCCCCTGATTTTCAAGGTGAGG
CCCTACGTAATCCAATCAACCAAGCCCACATAACCACCTACGTAGAATTTTCATAGAAAA
ACTACGTAAGTCTAGCAAAGCTCTGAATCCACACGTAAACGAGTTAAGGTTAGGAGCAAC
CAAACACCAATATGCAGACCTTGAGGAACTTGTCACTTCTTTGAAAGGAACCAACCACAG
ATATATTTCAATGTTCACTTCTTTGAAAGGAAACTTGTCACCGTTGGAAGGGTAAGTCTT
ACCACGAAGGCACACCAATATCATGAAGCCTTATACTCTTCTTCTTGTGATATCACCACC
AAGGCGATGATTTTCAACCGAGATAAATACAGTGGCAGTCACTAAAGTTGAAGCCGAAGC
ACAATACGGTCACTGGACTTCAGAATACGCTCAATACCGTTATTGAATACGAGTTGTGAT
GATTATACGGTCACTGCTCACCGTATAGCTCTGTATTCTGTTGAGTTGACCGGTCAAACA
TCATTGGAAAATTTCAAAAACCTCCTCGAATTGTTCCCGACTGCAGCTACATGTGTTTTC
AATTGCTTCTTCCACGCTGTCACAAAGGCTCTCTGTCTCGCACGCACGTTGTCACAAACT
CACAATGTCACGCCGCGTCTCAGCTGTCACGCACACACGCATGCATGCATGCGCACCGCA
TGCATCCTCCCGACACAGCGGCTGCCTCAGGCGTGCCCCGTGTCAGCCCTCTCGCCTGGT
GTAGCCCATGCAAGCCTCCACCCCCACCACGTACCCTGCCTCCTCCCTACGTGTCACCAC
TTCTTCCTCCTATATATCGCATCCGTGGCCTCGATCTCCTCTCCACCTTGAGCTCGACAG
ATCTTGGTCCACTTCACCGGCGGCCGGGGCAGCGAAGCGAGGAGGAAAGGAAGGAGCAAT
GGCGAAGTGCGGGAGCTACGTGCAGGTGCAGGACGGCGGGCAGTACAGTGGGTACCACGG
CGCTGGGCAGCGTCGCCGTCGCCTCCACAGGAGAAGGGCCCGTCGCCTCCTCAGTCCCCT
TCGCCAATGCCGGCGACCGCATCGAGGGCGTCCAGCTCATCGGCGGCCAGGTCCCTTAAG
CTGCTCCTCCTCCGCCCACGATCACGACGACTTCCCCCATTAATCCCACGACTCCGTCGG
CCTCCTCCGCTCCCAACCCCAACGTCATTGCCACCCGACCGCCTCCGCGCCACCCCAGCG
CTAT
