Contig Data
morexGenes
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Map Locations of contig_275784 (4790 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_275784

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44942 1 1673 bp MLOC_44942.1 Available Available None
MLOC_44943 1 510 bp MLOC_44943.1 Available Available None





CDS Structure of MLOC_44942






CDS Structure of MLOC_44943






Contig Sequence (4790 bp)

>contig_275784 4790 assembly3_WGSMorex_rbca.fasta
CCCCAAGCTTACGTTCTTGCCACTCCTTATTTCTTCATCCATCGTAATCGCACCCAAAAC
TTGAAAACTTCATCACACAAAACTCAAGATAAACCTCGTGAGATCCATTAGTATAATAGG
CAAATCATCAACTTTAGGTACTTTAATGAATTGGTTCATATTTAATTATTGCATAAGGTA
ATATATTCTAACTTCTTCGTGACTTATACCCCCCGATATAATCAATAGCATCATCAAAAC
AAGCAAACTATCCAAACAAAACAGAATATGTCTAAAATACAAAGGTCAGTAATGATCAAC
ACTAAAACCATACTTGTATAACTATGGAAATTCTGAAAAATTAGAAAAACTTAAGTAATA
TGTATATTAGTTGTGTGTAAAATATCATATGAAAAAGGCATTACAGTAAAATCACAAAAA
ATCTACACTCGATGTAAAAGTTTGTGTGTTTGCACATGATCAAATCTACTATCATCCAAA
TCATCCAAAAGGCTTNACTTGGCACAAACACTAATTAAACATTAGAGCACAATCATTAAA
TTAGAATAAATCATGTGAACACCAAATAACAGAAAGTAGAACACAAATTTAAGGTAAATA
TTCGGTTGCCTCCCAACAAGCGCTAATGTTTTACACCTCTAGCTAGGCATAATGCATAGG
ATCAAGTGATATCATCGTTGACATTAGTACCTTTGGATGTGTGTTCATATAGGAACTTTT
CAAAAACAACTCGGAACACATACATATTTAAATCTTAGCATTCTCAACGCTACTTTCTCT
GAACCCATGTTAGTTCTCCTTCACTATCCAGGAATATTGTTGATTAATACCATTAAAAAC
TTGTTGGATAATATGTAAAGGAGGAACTTCCTTTTATCATTTTCATCAAAAGTATGATTA
TCATGAAACACATACCTAATCATATAATCTTCATTATACAGAATTTCATCTATGACAAGA
TGTTCATGACTCATATTATAAAAATCAAAGATCTCTTGAGCCTCTTGCACAATATAATCA
AATTCATTCATGAGGATAAGAGTGGCTATCTTTTTAGCCTTGGGGTTGTTTATAATAGGT
AACTCGTAGAAAAGCCTTTGCAAAGAGGGATGAGTGCGCATAAATCTTTTTTCAACTTTA
AGAACAAGCGCTGAAATAGTATCGACATAACTATGGGTTCTTTTCAGAATAGGAATATCA
TTCAAACCAAAGTCCGCATACAAATAAAGAATTCCTCAATAATGTTTTATGCTCTAATAT
CACATTTTCCCGCAACAACAAAAATTGTATCTATATTTGTGGGAATTTCCTCTTTAGGGG
TTTTGTCATCCTCACTTCTCGCAATGACAAACTCAGACATGATAACAACTTCAAATAAGC
AAATCATGTAAACTACTGAGTTAGACAAGCAAACAAGTAAACTAGCAAAGATAAATATGT
TTTTGTTTTTGATATTTTTAGAAAAGAAAACATAAAGGAAAATAGAATGTAGAACAAGTG
AATGATAATTTGTATGAAGGAACCTCAGAAGAATTTGATGATGTCTCCCTGGTAATGGCG
CGATAAATTCTTCCTCCTACTTGTAAACTGTGTTGGCTTTTTCCCCGAAGAGGATAGGTG
ATGCAGCACAACAAAAATAAGTATTTTCCAGAGTTACAACTAAGGTTATTGAATCAATAG
GAGAAGCAAATAAACTCTCATTGTCAGCACCTACATACAAAAGAGCAAACACTTGCACCC
AACGTGAGCAATAGGGTTGTCAATCCCCTTGAACTCGTTACTTGCAAGGATTAAGTACTA
ATAGATAAATAATATAAATATAAATAAAATAACAGAAGAGAAATGGAAGCAATTTTTTTA
GGGTTTTAGTATTATACTTTGTGTAGACCTCGGGGGCATAGTTTTCACCATAGGCTTCTC
GCTCAAAGATAGCATACACTAGGTAGAAAAATTATTGTTGGGAAATTGAGAGAATAACGA
GTAGTTATAAAATACTTATTCACAGCAATGATGATACAAAGAGGCATCACGTCCATAAGC
AAGTAGAGAGACTCCTGCGTGCATCTAGTGCTATTACTCCACTCATCGACCGCTNNNNNN
CATGCATCTAGAGTGTTAAGTATGAAAAAGAGTAATGTTTGGAGCAAGATGGCATGATGC
AGACAAAGTAAACTCAAGCAATATGGATAAACCTCATCTTTTTATCCTTAATGGCAGCAA
TAAAAATAAGTGGCATAATCCTTTCTGTCACTGGGATTTATCACTTCAAGATTTAACCCA
TCACAACGCACCACTCCCACTGAAGATAAAGCAATCTAGTTGGCCAAAGAAGATTACATC
GAGTAGATTATCGTGGGAATTGTGGTGAACTTTGTATTGAACATCATAGAGAGAGAGATA
ACCACCTAGAAACCACCTAGATCCACCTAGATACTAGCTATGGACCCGTAGGTGTATGGT
AGAATAATCACACGACATCATGGGAGCAGCAAGGTTGATGTAGAGGCCCTCCGTGATTGT
CCTCCCTCCGACAGGGCACTGGAACAAGGCTCCACATGAGACCATGGTGAAACAAAGACT
TGTAGTGGAGGAAAAAGTATTTTGACTCGATCTCATTATTTCCTCATTGTAGAGAGTATA
TACAGATAGAGGTAGAGTAAACGGAGCCAGGGTGGCCCCAAGGCATCAGGGCGTGCCTAC
CTCCCTAGGGTGTGCCCTATTACGTTTGCACCACCTCGTGCGGCGTCTAGCCTACCTCCG
AAGCTTTGAGGCCTTATTTTTGGCCAGAAAAAAATCATCAAAAAGTTTTATGACATTTGG
ACTTTATTTTGTACTTATTTTCTGAAAAGCCAAAAACACGCAAAAAAAAACAACTTGCAC
TAGGGACTAGGTTAATAGGTTAGTTTCCAAAAATGATGTGCAATAACTTATAAATGCATA
TAAAACATCCAAGATTGATAATATAATACAATGGAATAATAAAAAATTATAGATATGTTG
GAGTCGTATCAAGGCCACCCGTCGCTCCAACCTCCTCTAGGGTCCCCGAGGCTAAGATTT
GTGTGTACTATGTAAGATGAACCCTAATCCCCATTCTTATTGTACTCAATCTAAGTCAAG
AACCTCATATCCACCGGTAGTCACTCATATAGCCTTTACCCTGCTTCCCCATTCCCCTAA
CGCAGATCTAAACTAAACTCAAATCAAATGCGAATTAGTAGGTGAGGAGGGGGAAAATGC
TTACTGTCATTATCGAAGTGCTACTTTGGATGTCGATGAAGGCGCCGAAAGGTCGACTTG
TTGTTCTCTGATCTACTGCATGCTGCTACTTGCATTGCTGAGAGTGGGAGAGGGGAGATG
GGAGAGAGACGTGATGAAAGGTGAGGGCAATAACTGTCAGCTCTTCGGGAAGCAACGCGA
CTTCTCAAGGATGACTTCTCGGGAAGCAACGCGACTTCTCAAGGATGACTTCTCGCATGC
AGCCCTCGCCGCCCACATGCATCACACGGGCCTGACTCGCGAGAAAATGCTGATTCGAGC
ATAGCTCGCGAGAGAGGCCCGGAGGTGCTTTAAATTTCATGCTATGGATGTCGAGTAGTG
TATGCTGGCAACCAATGAATCTGTTTTCTTCCAATGAATCTGTTTTCTTCCCATGAGGGC
GTGGTTCAACCTAATGCAGGCAATCAAACAGACCAATTATGTGTCTCTTGCATACATGTG
CATTAGTGTTTCGTCCATATTGCAACCGGCAAATCAAAATGATCCAGCTGCATCCGACCG
GCCAACGAGATCGATCAGCTAGGTCATGTACCTATACTTGTGTTCCATGTTCTATCGAGG
AAAATTCATATGTAGCATCTACTGCGCTTGGGCAATGTCACCATATGTATCCGAAGAAGA
GAACGATGCCTCAAATTTGTGTGAGAGGCTACTGTCGACGAGCCACAAGTGGAGACCAGT
TCCGATACTAGATGACCCGTTGCGCCCATGGCGCAAAAAACATTAGCAAGCCAAGCATTA
TAAGCATGTGTATGTGACAGTCTATGTGATAGTCTAATAGATATACTTTTATCTGACTAC
ATGGCATCATGATTCATTAAAAGGAAATAATGGCATTACTTGATAACTGCATACCATAAG
TAAATATAATTTTAGTGCTGACATAGTGTTATAAGAGAACTCAGTGCTGTTGTTCTAAGA
AATTTACAATGAGCATAAGTAGAAATTCAGCGTTGCTATATATTGTTGTAAGTTGATAAT
AGATTATTTACAATGAGCATAGTATATAGCCGGTAGGTATCATGTAGATGGTTGTGGTTA
TGTTGTGATGGTCATCAAGGAGAGCCATAAGCCATAAGTTTCCTACACACTCAATTCTGA
CACAGGAAAACATAAGCTTCAGTGGCAAACAAATAGAATTTGAAAACTGTGTATATATAC
AGAGAAAATAAAAATAAGAATGCAATTGAAAGGTAGAATCACTGGTTGCTGGAGGTCCGC
ACCCATGCTTGCCAGCCAGATTCGTCGTCGGGCCTATGGTCTTGGGGGGAAAGTGGTGCC
CATGATGCCGGAGTAGCCGAGCCGCTTGTGGTTGCTTCCTGGTGGGTGGGGTCTGCTGAC
AAACGAATCATCAAACACTAACCAAGGAGGCCAAATAAGAAAGCATCTGCATGCTACAGA
GTTGTGTACATGTGATAAAATAACAAGGAATAGTCATCAACGAGCATTATGCACATGCAT
CAGGTTAAAAGGAAGACAAACATGAAAAAATACCAATTCTGGTATTAGCC