Contig Data
morexGenes
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Map Locations of contig_275666 (2966 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_275666

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44899 1 1123 bp MLOC_44899.1 Available Available None
MLOC_44898 1 1008 bp MLOC_44898.1 Available Available None
MLOC_44900 1 677 bp AK360864 Available Available None





CDS Structure of MLOC_44899






CDS Structure of MLOC_44898






CDS Structure of MLOC_44900






Contig Sequence (2966 bp)

>contig_275666 2966 assembly3_WGSMorex_rbca.fasta
CGGCGACGGTGGCGGCGGCGCCGCTGGGGTTTGGGCGGGGGCGGCGGGATGGAACGGAGG
CTAGGGTGCAGAAAGGGTCTGCCTTCTTATAAGTACAAGTACGCGAGAGCATATTAGCTG
TTGGATCTAGGGGTTCCAGATCGGACGGCTGGCTTTCGTGGACGCTATTTTGGGCTGGGC
TGGATTTTGCTTCGGGCCCATGCCTCCTGAGGAATTCGTTCCAGTCAAGAAACGTGTGAA
TTCCATTCATTTAACAAGTGTAAACTCCATTTAGCCCTTGAAATGTGTAAATTCAATTTA
GTGGTGAAAAGTATTTTTATATAAGAGTAAACGTGTAAAATTCTACATTTTGTCCAGCAA
AAGAATTGGCCTCGCAATTAATAAGATATATAAACTAGGAAGACTCTACAGATTCAAAAA
ATGGTTACTTTTGGTAGAAAAAAAAAACATTGGTTACGACTCTCGCAGCATCGCTTTGTT
TCTTTTTCCGAGATAGCATCGAACTTAACAGGTTAGTGAGATGTACACTCTCATGAATTC
CTATGAAAACCAAGCGGGGACGCTCCAATATTGGTTGGAGCCCAATATTCGGCTGCAATT
CCATTCGAAAATATGATAACCATCCAAAGAGCGACATTCAGGCTGTCCCAATGCAAATAT
CTAATTTCAAACCCCAATATCAACACTCAAACAGCGCCCAAGTGATATTTGTTTCCATCC
CAATTTTAGAGGTGTTTGCACCATGGAATTTGATTCCACCGTCCCTCGTGGTTTGTTACT
TTGCCACAACATTCTGGGCAAATATGGGTTTAGAGCCACAACAAGAGAGTATAGTTGTTC
TAGTGCAATTATTATCTCCTAACATAACCATGTATGTCTTGAGACAATCAATTTACCTAA
TGTTCCAGGGCCACATAGTAGACACACCAAACAGTATAAATAACATCCTAATCTTACCGC
AAATAAAAATTCCAGCATAACTGCAGCAAAACTGTAACGGCCAATATAGTGTACTCACTC
TGTTCCTAAATATACTGTACTCCCTCGTTTTGTTCCTTATGCTGTCCTCTAGTGAAATCT
CTAAAAAGNNTTACATTTAGAAACGGAGGGAGTATGACTGAGTTGAAATACCCAGCAGTA
TGAACAACGTCCTAAGCCCGGCGCAAATAAAGACTCCAGCACAACTAACATCAGTCAAAC
AGTAATCTAGCAACAATGGCAGCAGCAAACAGTAAATTCAAGCAACAATAGCACCAGCAA
ACAGTAAATTCAAGCGGCAAGACATGGCAAATGCAAACCACAATAACTGGAAAAAGATCA
CCAAATGTGATTTTGTCCATTGCAAATAGCATTGAACCATTCAACAAATCAAATTGGCGA
TACTACGCAACATGTCCAGTTATTACCATACTTGCAATTATAAATTATTCAGCATATGCA
AACTAATGCCACATCCAGAAAAATATGAAAGGCAAACAACACATCATATCCAGAATAATA
TTTACGTATATCTAAGATTGTAACCATATACACAGATACGGTATGACCACACGATTTTCT
TAACCCAGCCAGGATTGCCAATGACACGCACCGAAGGCAGGCAATGGTTAATGATGGAAC
ACAAAACAGATGGACAAACAACAGGACAGGAATTTGCAGCATTTCTTCAGAGATGAATTC
AGATAATATGGATACAAAAATAGAAATGCAGACTGTGCCTACATAAATGTACAGATTTGG
ATAATCACATCAAATGGGCATTTGTAATGGCATAAAAAATAAACTGAAATATCTGTGGAT
GAGAATTCAAATAGCTGAACTGCCTTGTTGCAACAGCCATGAAAAATAAAGAGAATTGCT
GTTGCACTTCTGCTTATTCTCGTAAGATTTGTAATTTTAAGTCCAATGCATCAAAGCGCC
TTCAGTACTAGTTATAAATTACAGATCTTCAGCGTGTGCGAAATGACTTTTTTTAGCTGA
TGTGAAATGGCATATCACAACCAAGAACAAACTAAAATAAGAACACCAAAACAGACATCT
GGTATGATAGACCCAATCAAAATTACCACCACAGGTAGGTCAAGGCAAATGGTGCACACA
CACAATACTTATGGCTAAACAACAAGGCAGCACTATGCTCCACACTAGCAATCATCGAAC
TGCCACTGTCCACAGTATAAGGTAACTAGACATCTATAGGTATCACTTACCAGGGCCACA
TATTCAGAGTTTTCAGGCACATCTAGGAATCCACTAACAAATGTATACTAGAACAAAGAA
AAACACAATCGCTTGGAACAATCAGAATTCTAGTTGTAAGTGATAAAGACCACACTCGGT
CAAACAGCAATAGCAAAATACTCAACCACTCGTGAACCCATGCATGACTATTGGCTAGTA
ATCTCGAAAGAGCTATGCATACGAGATTTTATACGACAATGCAGATCTAACCATCCATGC
ATAGAACTAAACCACAGCAGACCACTTGATTACTGATTGTATTTATAGTGATCGAACACG
TAAGTATCGTTTGCATAGCTGTTTCATCAAGATACAACCTGCAATAAAGGGTTAAGCTCA
AGAACACATGTATGAACAAGATACATGTCACATTAGATCAACAAAGCATAAAATATGATA
GCGGCCATGAAAAAGAATAACGTCATTCACAATGACCAAAATTTTAGCTCGCATAGCATC
TCAGCAATAGGCGATCAAATATCCAGGAAACATATTACTCCAAGGTTTCAGTTTTCAATG
ACAAACGATAGGGTAAAAGAGCAGTGCAAACGCAAGCCACCTCTAAGCCTTCTGGTTGTA
GACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGACGGTCGAAGTGGTTGGCCATGAAGGT
CCCGGCACCGCAGTCGGCGTTGGGGCACTCCTTCCTGAGCCTGGTTACCTTGCCGGTGGA
GTCGTCGACCTTGTAGAACTGGAGGA