morexGenes - Barley RNA-seq Database

Contig contig_275564
Source Contig contig_275564
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_275564 (7180 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_275564

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_44861	2	2024 bp	MLOC_44861.2	Available	Available	LOC_Os03g63310.1, FRAME:-3, EVALUE:3e-156, 13103.m07017 protein cytochrome P450 71E1, putative, expressed
CDS Structure of MLOC_44861

Contig Sequence (7180 bp)

>contig_275564 7180 assembly3_WGSMorex_rbca.fasta
CCTCTCGTAGATGGTCATCACCACAGATAGATCTTATGTGTGCGTAGGAAAAATTTGGTT
TCCTATGCGACGTTCCCCAACATAGCTAACATACTAGAATATATTTATCATGTTCCAACA
CCGTTGGCGTCGGTAAAACCAGGGTAATACCGATCCAGTAAAAAGACCCTTGGACGCGAA
GTCACGAATATTCCCCGACGCGAGATGGTACTCACAAAGACCCCGATGTGCCCAGTGGCC
TAAGACTGACCATGTTGGGATGAAGTCAATAGGAGAAAGGCAGTCTACCTCCAAGGCCTC
CTCCCAGGGGTATTCCCGGGAGCGAGATGACCAGACACCACCTACGCCTCCAGTAGAATA
GGCGTGGGCTCTCGGAGGGTTGCGAAGGCCCGTCCGGACGAATACTACGCTGACACCTTG
AGCCATGCGGGTAATGAATGACTAGCCTATGAGCATGGGCTCTGAATTGACCCGTGAGGC
CCAAGGCATACACAATGACTACTGTGTTAGGACAGTGTGGCGACGGGCAAGTATTCGACG
GATCTTACAATGCCTCGAAGGGGTTGCATCATCATTGGTACATGCATGCCACGGGCGGCC
ATACCGCCATGGTACCGGCTACACTAGTCTATTTTGAGTATACACCTCACCCATAGGAGT
TTCCGACAAAGCCTTCTCTAGACACTACAAATAGAGTAGCCCGAGACTCCACAATGAGTC
GATCTTTCACACAACAAAGGAGACAAAGATTGACTTCACCATTGTAACACACATTGTAGC
TCTCTACCATTTCAATACAACAAAGCAGAAGTAGGGTATTACACCTCCAGGCAGTGACCA
CCGTCTCGGACCTGTATCACGTGGCTCGTCAGTGTGTTCGATCCCTAGAGGTTGTCCCAC
CCACGAACGCTGGGTGATCGCCAAACACACGGGGATGTCATTGAACAACAGACCCTCACA
ACGACGAAATAACTGCACATTTGAATCCACATGATCAACACGAATATTCGATCCCAATAG
TGCTTGGAGGTGATCTCCTCATCCGAGAGCGCAACGCCGGTGCAGGCTACTTCATCTATG
AGGATTTTGATTTTGCCAAGGTATTAGGTCATGATGAGAGTACCTTTTTGCAAATTGGTG
AGCTCGATCAGGGTATTGATGGCTTAGGCTTGGCTCTGGGCAGCAAACATGGCATGGATG
GCCTTCCACACCATGGCCGGCGTCTGTAGTGTCACGACCTCAGCAAGGATTTCGCATGAA
AGAGAACCCATCAGATAACCTTGAAGTTGTTCTTGCTATGCATACCAGAGGGATCGGGCA
AAGTTTGCAATTTGCTCATCTTTCTCGTCCTTGGTGATGGTGAGAGTGGCCGGAGGTGCC
GGGCTGCTCTCCTCGAGATGGTGTGCCATATGTGCGCCCTTGATTTGGGGCAGCATAATG
GCCTTTCATAGGAGGAAGTTTCATGTCGCAAGCTTCTCTTGTGGCGGCGGTCCGAGAAAG
GCAGAGGTGGTACCGGTGGAGGAGGAGGCGAAGATGGATGGAGAGGTGGTGGCAAGGGTG
CTCAAGGTGCTGTTGATGGCGGAAGTGGCGGTGGTCATTGTCTCGTCCGAGGGGGTAGCT
AGATGCGATCTTCTATAAATGAAGAAGAGCCTCTATTACCATATAAATTATGGTGGAAGC
GTTGAACCCAATTGCAGTATTGAAGAAGCATGCATCAGCAACATGTGCAACAATAGACTA
TTACAAGCTGTACTAGAAAGCCAAAGCACATTATTGCAAACAAACAAGTTGGAGATGTTT
TATCGTTTAAACTTTATATCAAGATTTTACATATGTGCTAGAGTTGACAAAGTAATTTAG
CAGATTATTAAGTCATAAAGAGAGTATTTTCACTCGTGAAAACTGAAAACATGCATGCCA
CAACTTCGGTTTTTTTTCATACTCTAATGTACTGTAAATACTAACGGGAAGAGAGCAAAA
TACTGATATCTCCATTCGAAGATGTAAATTGTAGTTTCACAGTATAAATTCATGCCTTAG
CCAGTATAAAAAGATGGAACAAGATACAGGGGAGTCTTCCTACAGAAAATCTGTCTGCCA
GTCCCTTCCATGCTCACGTCTTCTTTCGTCATGCCGTCAGGCAACTCCCAGTCGAACGAA
TGCAGCAAGCTAGCAAGCGTGAACTCCACGATGGTGGCGCCCATGGGGATAGCAGGGCAG
ATCCGCCGCCCGGCGCCAAATGGAAGGAGCTCATAGTGCGATCCATAGAAATCAGTGTCG
ACGCCGTCAAACCTCTCCGGGTAAAACTCCTCAGGTTTGTCCCAGCAGGCAGGGTCCCTC
CCCATAGCCCACACGTTCACGAAGATCCTTGTCTTCGTCGGGATGTCGTACCCAAGGACC
TTCACATGGTCCATGGTCTCCCTAGGGACAAGCAGTGGCGCCGGCGGGTGCAGTCGTAGT
GTTTCTTTGACGATCATTTTCAGGTAGTTGAGTTTAGAGAGGTCGTCGACCTGCACTAGT
CTCCGTTTGTCGCCAACCAAACTCCTTATCTCTGTTTGTGCCTTCTTCATCACCGTCGGA
TTCTTGATCAATTCAGACATAGCCCACAACAATGTCACCGAGCTCGTCGTCGTGCCACCG
ATAAATGCATCCTAATCAACAGCATATATGACCACATTAACCTTGATTCACTTAAAATAT
ATAGGAAAGTCTATGTGCAGTTTAGTTCCAGAGAAGCACAAGTTCAGTTAGTACCATTAG
AAGAGCCTTGAGGTGGTCCTTTGTGACCTTCCCTTGCCCCTTCCATAGACTGATCAACAC
ATCCACAAGGTCATCTTTGTCAGTCTTCACCCTCCCAGGATCCATATGCTGGCTGAGTAC
CATTTCGAAGTAGGAGTCCAGCTCCAGGAATATCCTCTGGTATCGCGCCTCCAGCCCCAC
GAGCTTATCGAACCACCGGCTCATCCGCGATGCCGGGAAGAAGTCCTGTGCAGAGAAGGC
AGAGAGGGCGACCATGGCCTCGCTGAACACCTGCTGGAACTTGGCGTACTTCATGAGCTT
GGCGCCCTTCATGCTCCCGAACGCCACCGTGCCGATGAAGCCGTCGATGAGCGTGAAGAG
GGTCTCGTTGAGGTTGACGGGCTCCCTCGGCGGAGACCGTAGTGAGAGTGATTGGATCAG
CTCGCCGACCTGAGCTTGTAGTGCGTAAGCGAAAGACTGGACGCGTTTGCTGCTTACGAG
CTCCGAGACGAACAGCTTGCGCCTCTCGCGCCAGCTTGCGTTGTACGGCGAGAACGCGAT
GTCTTGGTTGCCGTAGGTGATCAATTTTGCACCTGGAATTCAATACTACTGGCTTATTTT
CAGATAGAAATAACGTGCTTAGTTTACCAATATATAACTTCTCAAGCACTTGGAGATGTT
TAGAGGTTGTTTATTTTCTAAATGTTTTAAGAACCGGCCGGCCTGCAGACAGTAGCAGTA
GGGGTGCGAAAGAACTTGCCTGGTGAAGAGGGTCGGCTGCAGCAATGGACATCATGCGTC
TTGAGCACCTCCTTGGCAGCCTCCGGCGACGACACCACGATGGCCGCGACGCCGCCAAGC
TGCAGGTGGACGACGGGGCCTAGGCTGCGGGCCAGCCTCTGCAGCGACCGGTGGGGCTCG
TGCACCATCAGGTGCAGATGCCCTATGATTGGCAGCCTCAGTGGACTCGGAGGAAGACGG
ATGGTGTTCTTCTTCTTCTTGCCAACGGCTTGCATGTACAAGAAGATTACCGTGGGAGCT
ATGATGAGTAGAGGCACTGACCATAGGAGGACATGCTTGAGTTCTGGAGAGGGGTTCAGA
TCAGGCGCCATTGTTGTTGTGCTCTTCAGCTCTTGGAGAAGACAGTGGAGCACACTAGGC
AGCTGGATATATACACACAGAGAGATAGGAGATCCAGAGAGTTCTCCTCTTCACTGATTG
GGCTGTGCAGTGCGGGTGAATGATTGAGGTGCCTGTGGAGAGTTGGCATGTCGTGATCGC
CATGGAGCTCATCAGCCAACGCAGAAATTTGTCTGAGGTATCCCTCTTTCAGTCTCGATC
AGGCGTACCACGCATTGGACTTCGAGAAAACAGAGCACGTGCAAAAAATATTACTCAATT
TGGTAATCCTTTGTATGGACAAATCACAAGGAAATAATTCAGAGCAAACAGAACACTCGC
TAGCTAGCTACTTCCTCCGTCCCAAAATAAGTGTCTTCAGCTTAATATAACTCTGTACAC
GAGCTGGTACGTACAAACTTAAGACATTTATTTTGGGACAGAGGGAATATGAAATGGGTA
AACTCTGGATCATCGGTAATTAGTGCTCAGAAAAATACAAGTCTAGTACTAATTGACACC
ACCGGCAACAACTGGCCCCTCTCAGTTCCTACCGCTGGCCGAAGATGCAAATATGAGGAG
CACAGTTTTAAAAGAAGGTAAAAAGCCGGCCTCTGCATCAATGGGTACATGTAGCCTTTC
ACTATTGTAAAGTTTTAAGATCTAAACATGTGTTTTTCGTTCCCAGGGTCATATGAAAGC
CTGTCTAAGATCTAAACAGTTTTAATAGCACGTTTACAATGGTGCACACCCCAACCCACA
TTCTAGGTTTCGAAAACAAAATTGTGAACTTTGAGAAAAAAGGCAATCAGGCTTATATAT
CTTGAGTTGAAACTTAGCTCTGTTTGGATGTATGAATTGGAGACCTCTGTACTGCATTGG
GCTGGAATATAGTTCAGCAAGAAAACTGAGATGGGTCTAAATATGAATTCCGTTGTTTGG
TTGTTCGATGAATTCCAAATCATGTCTGGATGATAAAATTTGGAATTGCATTGATCTAAA
CAAAAAACTTCCCCCCTTTCCGTTTCTATAATCATCTCTCTCGACAGACTTGGCTGACTG
ATAGAAGACGGACAGTGACTGTAGGAGAGGTGCTGGTCCAACTTTGCTTGTGTCGACCAG
CCGATTCAATAATTTCTCCAGTTGTTACTAGTCCATGTAAAACAGCCACTGGATACACCT
GTCTGCACTCTGCAGCACTGAACATCTTCACCGAATGCAATGCTCTCGAGCCACCAAGAA
GAGCCCAGCACTCCTTCACTCCATGGCGGCAAGGCAGGCTCCATGTGCGACCGGCTACCG
GGCTGTACATACACGCCTTTTGTCAGGCATTCCATCAAGCCAAGCTGAGCTGGGCATCTT
CTCCCAGCCCACTAATGGCCAAGCCCTTGCATTGATCCAGTCCTGTGCCACTGGATGCAT
GCATGTCTGCAGCTCGAACCAGCCGGCTGTACATGCGCGCCGCCTGTCAAGCATGCCGTC
GTCGAGCTGAGCTGAGCATCGTCTCCCAAATAATCACTAACGGCCAAGACTTTGCTTTGA
TTCGTCGAGTGCTTCAGTAAGATTCTTGGGCCTTTGATCGAACACAACACAACCAGCGCC
GGAACTGCCGCTCCATCGCCCGGCATTTCGTCGAACACCTGCTCCTCGCTGCCAGGACCA
GCGACCACTAGGCAAGGAAGAGTGGGTGCCGGTTCGCCGCGGGCGTTGCCCTCCGTCACG
CCGCTTGGTGGTGGCCAGGAAGAGCGTCGCGGGTGGAGATGCAGAGGCCAAGGTGCAGGG
CGCGACAGTGGGCCGTGGGGCAGCTTCGACGCGGCGGAAGGAGTCGGAGAAACAGATGGA
CGGGGCGGGGAGATTGAGGTCCGGCAGTGGAGTGGACGCTGCCGTTGGTGCCCGCATCGA
GGCCAAAATCACTGTTTTGACCTTGTTCTTAAACTATAGCATAAAATGAACATGAACATT
GTGTGACACTATTTGACGATCTAACATTTTTGACAATGCCAGAGACCGTTCTTCATATAG
AAACGCTGAACCCGTTTGTGTTGCTGCTGCACATGAAAACGCGGAACCTATTTGTACTGC
TGCCTCACATAGAAACGTCAGGGGTTTTGACGTTACTGTCTTTGCTGTAAACGCCATGTA
TCATGATGTTGCTTCTCCCGACCCCGACCAAGGTAAAAGCAGAAAAGCATCTGGCAAAGT
CTTGAGCTCTAGCATTGAGAGCGTATATTGTGGGATCAAATCCGTGAATCATGCTGCAAG
TGTAAGGTACATAGCGAGGGCCGAGGAGCTTCAAGAGTATTTCCTCCAGGCGCAGGGATG
TATCTGGAGTTAGAAATCCTAATCTAGGTAGTTAATCCATTATACTTTTTGACATGCTCG
ATGAGAAGAAATACCGATGCCTCTCCTTAGATCTGGAGTGGCCTGTGCTCAGTATACAAA
AGTCTGAAGTGAAGAGGCAAAGACTACTCTGTTGTAAAGTGTCGTTTTTCCTGAAGTCCG
TATATTGCGTTTTCATGTCAAAGAGTTAAGGGACAAATGTCCAATTTACTCGATTTGTAT
AGAGCTGTTGTGTTATAGATGTTGAATCCGTGAAATCTGCTTACAAAATGTGTGTCTGTC
TGTATACGTGCTTGTGACCAGACACAGGTTTTTTCGTGCTAAATTTGGAGGTTTCAAGTT
CAATTTAGGAGTTGGTTGCCTTGTTCGCTGAAGGCTGCTACGAGACGGTGGCAGCAGGAG
GGCAGCATGGCAAGTCGCCTAGATAGTTTAGGACGTCTGGATGTGTAGGTTCAGTGTAGA
CAGTTAGGAGTAGCAAACTTTGTTTTAGCCGTGAATACAGTAGCCAACATGATTTAAATT
ACAAGTTTTTATAAAATAGCTGCCCCAAATAAGTTTGTCTTAGATTTATGGAGATACGGA
TGTGTCTTTCTAACACTAAAAAGACGGAGCGAGTATAAGTTACGGATGTAGTACTATTGG
TGTGAAACCAAGCATAATGCTTATGATTTCTACTCGCGTGTTGCAGGGGTAGTAACACTA
AGGAGGTGTTTGGTTCAACGTTTCTTGCCCGTGATCTAATTACACTGGTATCTGATAACA
TTAAGGCCTTGTTTGATATTAGTATATTTTAGGGAATTTGTAGGAATTATCCCGGTCAAA
CCCCTCAATCCCCACACATCTCATAACACCATTTGGTTCTAGTGTATTTGACACGTTTCA
TCTCCACATTTCTCCTCAAATCCCTAAATTATAGTGCATTTTTCTCAATACCCAATACAC
TACCCCTACGTAGTGTATTGGGGATAAATGGGGATTTGAA