Contig Data
morexGenes
Links



Map Locations of contig_275465 (5592 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_275465

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44822 2 1360 bp MLOC_44822.1 Available Available LOC_Os02g58270.1, FRAME:-1, EVALUE:1e-175, 13102.m06750 protein metallo-beta-lactamase family protein, putative, expressed





CDS Structure of MLOC_44822






Contig Sequence (5592 bp)

>contig_275465 5592 assembly3_WGSMorex_rbca.fasta
GGGAGGAAAGGGAGAGGGACGCGTGCTGGCGGCTAGGGTTATTCCCTCGGTCGCTCGCGG
GAGCGACGGGAGGGGACGAAGGGAAATACGTTGTCCGATTTACCAGATTATCCACAAAAG
TAGTGTTCAGACAAACATGTTACACATGATTGATTTACTAGCCTGTCCTAATATAATAAT
TTCCTTTAATAAACACGGTATAATCTGTTCCAATAACACACGCTCATTGCACGATACTCT
ACTACATTTTCAACTCGCTATAGGTATATCCGAGCCTTATACATCCAGGAGAGAGGTATC
ATGACGTCTTATATTAGTTTACAGAAGGAGTATTACAATAAAGCACATGGTATTTTTACA
AAGAAGTCAAAGCAGTAGCGTCGATCAGTATTTTACTGGGACTGCATATCCACCTAGTCC
CTTTATTCTCGAATCCATATATTTGAAGTCTTTGATCATAAGATGCTCCTTAGTTTATGT
GGTCTGCAAGGAGAGCCTCAATAGCTGAATTCTTGGCATGTACATCCTCATACCGGATTC
GGTAGCCATGCCCTGGAAAGAGACAACTCAATAAGACAATAATCAGTGCAAGTTAAGGAA
AAGCGAGTGAACCAAATATCATAAATGAAATGGTTTACGACAGTCTAGATAGCTTAGCTT
TTCTTTCGAAAATAGTTAGATTAGCTTATACTATTAGTTATTTTGTTTGGCCTTTGCCGC
GGTTCTCTTTGTATGGTTTGACCTTGTAGTTCTGTCGCCTTCTCGGTGTCCTTGCTCTAG
TACATTACATTTTGATGTGTGTTCAAGACAAACATGATATGTTTTACAAATCAAACAATG
AAGCCGAATATTGGTAGTTTATGTGTGCAGCATTTGAAGGTCTACATACCAGGTAAAAAC
CACTCAAAATCGATGACCAGTAACTTCCTGATGCTGTCCAGCTGCACACCCACTGCAAGG
TTGTGAAGCAGACACATCAATCGATGTTTTAGCATACAATAAAGTTGAACAGTGATCTTC
AAAAAGTTAGGAAGGCTGGGAAGAAGGGAGGATTCTGCTACCTGATTGCTTACTGTACAT
CAGAAAGAGGTTTAGATCATCTGACTCTTCTGTTTTTGCGACATGGTCACCAGTAAATAG
TGCCTTCAAAGGTTTGTACAACAAACATACTGAGCCCTACAAAAATGAATATATAATTAG
TTAAAGAAGATCAGTGTGGTGCCCAAATACTTCTGCATTTGTCTTGTCCCTATCCCCAAG
CTCTAGTGCCTTTTTTTCGTTTTTTGGGTTTTCATTCGGTTTTCCCTGATTAACCGAGAA
TGTTAGGTTTTTGGGTCTGGTTTTCCTTATAAACTGGACTAACTCTCTTCTTCTTAATGA
AATGCACGAACACCTGCCCTCGCACGAGGTTTCTTAAAAAAAAAGATGCCCAAATACATC
CATGATCAGTACAATCAAGCTGCCTTGCATTTAAAAAGACTAACAAAAAAACTTGGTGAA
TTTCCCAGCAACAAAAGAATATCATGCAATTATCTGAAGTTTAAGAAAATCTTGGACATA
ACAGAGTGATAACCCAATGTATTCATAACTTACAGTGCAGCCATAGTGCACATATCTCCA
GGCTTACCTCCTCTTTAATCCAGAGGTAAGAAGTACTTATTTAATGTAGCTTCATTCATT
GAGTTCAAATTCTTACTTTGGTATGCCCTGGTGTATGAATAAGTTCAAAATCAGTTCCAA
TGTTCCAGGGGCCATTTCCAGTAAGTTTCCACTCAACATCAGCAGTGATATCCTCCACCT
GTACCAGCATGATGGTCATTGCAGTAAATAACCAGGACAAATATCAGACAACAAATTACA
ATACTCGGCCGCCGAAATCAGCATTAACAGTCTCTACATGTATCATCATGGTTATTGCAG
TAGATAATCAGCGAAAATACAATTTTAGAATTTATGAATTACAGTATGATTCAAGTATCC
TCAGAACATGAATTGTTCAAAATGCAAACCATTCCAACACTCCTAAGTTTCTTTCTACAG
GTCATTTTGTTTGTTGGGTATAGAAGGATGAAGAGAGAAAGGTGCAGTTCTGTGTTTGAG
GCTCTTACATCTCCTGAATGAATGATTCTCTCGCACTTTAGCCGCTCGGCCCATTTCCGA
TGATCCGCTACATCATCACTGTTTGATGACAGGTTAGATAGACAATATTCAATCTCCCAA
ATAAAAAGGCGGTAAACGCATAAATAAATACAGAATCATGTCAGTCTGAACATACATGTG
AGTCAGAAACATGTAACGCACTCCGCCGAGCTTCTCAAGCTGGTTCGCTAGTTTCGGTGT
ATACCTTGGGCTGACAACAATACCAGAACATCAACAGCGAATATATATAATTGATTGTAG
TTTCTGAATGAGACTTGATAAGTTGATTGACAAATTCTCAGAAAATCGACAACGAATATA
CCTGTCAACCATTATGTTCCCTTCCGGGTGAAGAATAAGATAAGATGTTGCTCCATATGA
GTTCTCAGAATGGTAACCACAGAGGTAAACTCCCTGAATAGATAAGCAGGCAGTTTATAC
ATTTATGCTAAAGGACTGTGACTAGAGTAAAGATACGAAAAGAGAGACATTATATGAAAA
TGTTTATACATACGGGAAGATCATCGTCGATGGGGAGAGGGAACGTGTTCTGCACTTGGA
GCATGTCCTGTGCAGGCTTGTCGGTGTGGATAGAGGATGTAGGGCAAGAGAGCAAGGCCT
GCAAACATACATGGAAATGCCATGATCTATTTGTCCAATGACTGATCTTTTTTGATAGAA
CGGAAGGAACCCCAGTAACTTTACCAGGACTAAGCATTAGTATGAACTAAGTTGGGTGAT
TGGGTCAGAGAAATACCATCAGTTAATTAGTGTCTGGTGTTGGACATCTAAAACACCCCG
GTTAATTGCAGCTATGATTGGCTGATCGAAGAAGGCCTTTTAATTACAGTGATCAAAGAT
GTTACCTGCAGTGCCTTGGTCCTGGTTTCCTCGGAGGTGGGTTGCGCCGCCACGGCGGAC
TGGCCGTCGACTCTCTTGAACACCTCCGGAGCCATCCACCTGCAGGTGGCGCAGTCGATG
CACCGGTGATCTGCACACCAAAGACCCCGTCAGCTGGGACGATGAGGACGAGGTCGCATC
AGCGTCAGCTTGACTGCATGGGGGAGCTCACCGACGAAGAAGTCGCCGGACACGTTCTGC
GGGCGCCGCCTGCTGTCGAGCGCCGGGGGAGGGGACACAGTGGCGCGGACCACAGAGACA
GAGGTGGCGCGTCGGCGCGGACGCAGGTGAGCCGGCGGGGCGGCGAGGGATGTGGCGGCG
CGAAGGTTGAGCGCCATGGCGATTGACGGGTGAAGTTTTCTGTCTCTAGTGCACTACGCC
TGTGAGATGAGCCGAGGCGAGCTGAGCTGAGCTTAGCTGAGCTTGTCAGATGATATTGCT
TCTTGACTTGTGCATTTATTAAGAGCAACGTGCGTGTGTGTGTAAGCTCAATCAATCAAG
ATCCTCGGGGCCAGCATATGACGCCATCGCTGACCGCACGCACAAGAAACTTGTCAGGCT
TGAGGCCCAAGCAACGCAATTTTTTTAGAGGACAAGCAACTCGATTCTGATGAGATGATG
TAACTTATTGTGAATCGGATGTATATAGATATTTTTAATGTGTTTATTTACTCATTTCAG
TTTATAATTCATATTAAAATATTTAAAACATCCTATATTTGTGAACAGAGGGAGTAAAAA
CGGTGTAGCTGTCCGTATAAAATCGTACTAGACCATCTTGTGGGGCCATCTTTTGTTATG
AGATTTGCTTTTTTAGAAACGAAACAGAGGAAGAAGTTGCACACATGCAACATGTGCCTC
CCCTCAACAAGCAAAATGAAACAAAGCTCATGCGGACCAGCAGAAAGGCCAATGGCCTTT
CAAGCCCCTCGTCGACCAAATTCCGTCCCTCTCGGTCACCCATGCAATGACAATAGAAAA
CGAGAGAGAAACCCTTGCCGCTCTCTATTCACCCACACGTTGACCGCAAATCCCAATTCC
CCATTGCCCCCCTCCCAAATTACCCACATCACAACAGTAAGAGCACGTGGCCTAGGAGAA
GCTACATGTGCGTCACTAGTTATGGATCGATGGACCCAACCAGGTCGCAAAATTGAAACA
CCCACTATCAATCGGGCCCAACTCCTTTTCCAGGAAGATTAGTAATTGTATGGATATTGA
AATTTAACAAATATCGCTCAGTTTGGCACGAATTTCATCTGTTTTTTGAAAGAAAAATAG
TTTGAAATGGGACGAACATTTGGTGTATGCGGTTGGATGGCGTCTACCCCTATGGTTGTC
CATGGATGGGAGCTTGGGCTCTGACATCAGCTCACGGCTAGATAGAAGCTCGGCCTCAGT
TCCCGCTCGATGCTGACCATCTTCTCGAGGGGTGTTGGGAGCTTAGGCCCAAAAACTTGA
GTTGAGCAAGCGACGCTCGGGACTCATACCCGATCTTGGGCCCCGACGTCTCCTCCCATT
CCATCACCAAGACGACGCTCACGACTTAGGGGTGGTCAGGATGTAAAGCAACAACAATTC
CTTAGGTCTTGGTGCCACCAGGATTGGTAGAGAAGTAAGGTAATGTTTGAGGCCTTGTAG
CACCTGCTAGGCCTCCAAGGTCTACTTGAAAGGGGCAGACTTCTTGAGGAGCTTGAACAA
GGGGAGACCTCATTCCTCGATCTTGGAGATGAATCTCCCCAAGGAAGCCATGTGGTCCGA
GAGACGTTGCACGTCCATGACGCATGTCGGTGGCCGCATTTGGTCGATGTTGTTGATTAT
TTAGGGTTGGCATCTATGCCTCTACTTGATACTAGGAAGCTTAGGAGTTTCTCCGAGGCC
ACCCCGAAGACACACTTCTCGGGATTCAGCTTCATGCAGATGTGCCAAGGTTTGTTTAAG
GTTTTCCACAACATTTTCGAAGAGTGTGGCTTGATCTTTGTTCTTCACGATGAGGTCGTT
GATGTAAGATTTGATGTTGTAGCCTATTTGGGACTCCAGAGCGATGTGCATGGCCCGCTA
ATGTGTGGGGCCGGGATTGTAAGGCGAAAGGGATGTAGAAGTAACGAAAAGTCCCGACAG
GGGTGATTGATACTTGTGATCTGCATTGGGTTTTCTGTGAAGAGGAACGGATGATGCAGC
ACAATATAGATAAGTATTTCTCTCAGTAGATAACCAAGGTTTATCGAACCAATANNAGTA
ACAACCAACCCCCATCTTCAGCTGCTACACATAAAAGAGGAAACACTTGCATCCAACGCG
GGCAAGAGGGTTGTCAATCTCCTTGGACTCGTTATTTCAAGCTTGTAAATAGTGTGGTTG
GTAGTAGATAATTGTAAATTGCAAAAAAGAACAACAAGGTATTGTAGCGTTTGTAAACGT
ATAAGTGAATAGACCCGGGGGCTATAGTTTTCCCTAGTGGCATCTCTCNNNNNAGTAAGC
ATACGGTGGGTAAATAAATTAATGTTGGGCAATTGGTAGAAAAGCACATAGTTATGTGAT
ATTTACGGCAAT