| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_275394
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_44793 |
1 |
734 bp |
AK361879 |
Not available |
Available |
None |
CDS Structure of MLOC_44793
Contig Sequence (9431 bp)
>contig_275394 9431 assembly3_WGSMorex_rbca.fasta
ACGAGCTCCCGGCAGGTCGCTGTGGTGGCCGTCCACGGACGGCGGGCGCCCCCCCCGCCG
CCGCCGTAGATCTCTGGTCGGTCTTGACGCGCGGGCTCCGATAGACCTTGCAGAGGACGA
CCTCGTCCGGGGAGGAGGCGTCGGGGTTGAGGCCGATCTCGGCCATGAGCCAGCCCGAGC
GGACCAGGCGGCCGTCCTCCTTGGTGGCGAAGGAGAAGGCCTGGCGGTACCCGATCTGGC
GGCTGTGGCCGATGCCGGCGAAGAGGGGCTTGGCGGCGCGCTCCGAGTGCCAGCAGCCGT
GGTCCCCGGATCCGACGGTGCGGGACTTGCGCTGGCCGCGGCGGCTCTTGGTCCGCAGGA
TCGTGAAGAAGTACCAGCTCTCTTGGCCGTCGCTGGCCGTGGCTGGGGCGTAGGCGCGGG
CGAGGTCCTGCGGCCTGGCGGCGTAGACATCGGCCTCGTGGATGAACTTCCAAGGGCGCT
CGCGGTTGCGGGACCAGGGGGTGAGGTACGTGGTGATGAGCTCGAGGTCAGAGGGGTGGG
AGGCGAAGTCCGGTCGCTGCGCGGCGCGTCGGATTGGAGCCATGGCGATTTGTTTTTGTT
GTGGGGGGGAGAGAATTATAGAGGGAGGGAGGAAAGAATGGTTGTGGATTTCGGAGGAAA
ATCAAGCCTATATATTAGCAGCAGCGGCGATGACGCGTTTAAGCCTGAGTCCGAACCGCG
CTCGGCATCCAGGACGTACGAACTACGCCAACCCCGCCTGGATTACTACTGTTGATTGAT
CTCCTCGAATCCGACTTCGACCTGGAGACGTACGAGTTTGGCAACCGGAGCCGCAGGGGT
TGGTGGACGCGAATTCGACCCGGAGTCGGTTTCGTTCACTCCCATGGGCTGGGCCTAGAA
AGGTGTCCAGGCCCAGTCAAACGGTCCGCATTAATAACCCGCATTACGACCGCGCCACGG
ATAAAGGGATGATCACTTCTCATCAGCAAATTAAAAATAAATTTAAAGGGATGAGCAAGT
CTTTTTCAAAAGAGAAGAGATAAGGATGATCAAGATTTAAAATAATTAAATAAATAGGGA
TCAATTAAAAAAGGGTGATCATGGTGCGGAACTTACTCGCAGATCCGCAAAAGATGAAAA
CTGAGAGAAGGCATAGAAACCGAAAAGATTTTTGCGGAACGGAAACGGAAATAGAACGTA
TGGTCCCCTCCCTGCATGGAACATGTGCAGAAATGGAAATTTTTTGATTACACTTTACCT
ATAATGCAGCCAATTTTGAAACGCCAAAACCCATATACTTCTAGCCTGGCCCAAGCCCAA
CCCAAATCTTTACACACCTAACCCTAATCTTTCAATCACTCTTCCCTATTCATTGCCTCA
GGTCATGCACTGCCACTACTGTTCAAATACTCATACACCCAAGCAAGTAGTGATATGTCT
CGGCTTACAACCACCACAATGTCAAGTGCTTTATCAGAATTTGCATGGAGATAGGGAAGT
GTTGAACCTCCCCAAAGAGGCCCATTGAGTCTATTGATATAGATGGGAAAAACCCTCATC
GTGGAATTCCAAGGAAGGTTAAGTACGATGCATTAACCAAAGAAGGATCATTTACAAACT
CCTCTACTTGCGCTAGTTTGCATGCATGTGTTGGATGTTACAGGAGACCTCTAGAGTCTA
GGAGAGATTCTATAAGAATCTAACAACCCCCTTAATCACAACTTTATGAAGTTGAAAATA
AATCTGGATGATTCCAACTCCCTTGTTGGTAGAACCTATGTGAAACCATCTGCAACTTGA
CTTGAAGTGGACAAATTGAATTTATTTTTTTGCTCTCTTTTTCTCTAAAATAATGATATC
TATATTTATGGGTTTTGTTCGGCCATGGAAGACATGATTTGCTTACAAATATGTGACACC
CAAATTACCACACCAAGACATGGAGTTTGATTTTGTGTTACTGCAAGTTCCTTGAGCATA
GATTGAACCCAAATAGTTTTTACGGTTGCATTTGCAAGATCTTTTTTTCTGCTTTAGTAT
GCAAACAATCTTTTGGCTAAAAATTGAACGATCTTGGGTCATAACTGGCCCTTCTTTAAT
TTTCTGCTTTAGTTTGCATTAATAACCCGCATTATGACCGCACCGCGGATAGAGGGATGA
ACACTTCTCATCAACAAATAAAAAAATGAGGGATGTGTAAGTGTTTGACAAAAGGGAAGA
GATATGGATGATCATGATTTAAAATAAATAAATAAATAAATAAATAGGGATCAATTAAAA
AAGGGTGATCATGGTGCGAAACTTACTCGTAGATCCGTAAAAGATGGAAATCGAGAGAAG
GCATAAAAACCAATAGGATTTTTGCGGAACGGAAACAAAAATAGAACGTATGGTCCTCTC
CCCACGTGGAACATGTGCAGAAATGGGAATTTTTTTATTACACTTTACCTATAACGCAGC
CAATTTAAAAACGCCGAAACCCATATACCTCTAGCTTGTCCCAAGCCCAACCCAAATCTT
TACACACCTAACCCTAATCTTTCAATTACTTCCCTAGCCATTGCCTCAGTAGTTTGTGCA
TTGCCAGTGTTCAAAAACTCATACACCCAAGCAAGTAGCGATATGCCTCGGCTTACAATC
ACCACAATGTCAAGTGCTTATCAGAATTTGCATGGAGATAGGGAAGTGTTGAACTTCCCG
AAGGAGGCCGCATGAGTCTATTAATATTGATGGGAAAAGCCCTCATCATGGAATTACAAG
GAAGGTGAAGCAGGATGCATTAATCAAAGAAGGATCATTTACAAACTCTCTACTTACGCC
AGTTTGCATGCTTGTGTTGGATGTTAGAGGAGACCACTAGAGTCTAGGAGAGATTCTATA
AGAATCTAACAACCCCCTTAATCACAATTTTATTAAGTTGAAAATAAATCTCGATAATTC
CAACTCCCTTGTTGGTAGAACCGTTGTGAAACCATCTGCAACTTGACTTGGAGTGGACAA
ACTGAATATCTTCTTTTGCTCCTTTTTCTCTCACAAAATGATATCTATATTTATGGGTTT
TGTTTTGGATGGAAGACATGATTTCCTTACAAATATGTGACACCCAAATTATCACACCGA
AGACATGGAGTTTGATTTTGTGTTAGTGCAAGTCCCTTGAGCATAGACTGAACCCAAATA
GTTTTTACAGTTGCACTTGCAAGATCGTTTTTTCCTACTTTAGTATTTGACCTTGATAGA
GTTGCTTCTTTTAGCACACCAAGAAATTGAGTTTAGTCCAAAGGAAATAGCAAACCGACC
AGTTTACCTTCTATCATCAACAAATCCGGACCAATCTCCATGTGGAAAAGCACTCACCAA
GGTGGATGATGATTTATTCAATGTCAATCAAGATTCAAAGTGTTCTCGATGTACCTTAAG
ATGCGTTTTAAAATTTAGTATAGTCGATGCGTACAAATACTGACACACTTTGTTAACTAA
AAAAGAAATTCCAGGTCTCATAAGTATAAAGTATAGAAGATCATCAACTATGCTTCCATG
TTTTATAATTTCTTCTTGTTCCAAAAGTTCAACATGAAAAGATGATAATTTCTCAGTGCT
GGAAAAAGGTGTAGTTGAAGGCTTGCAACCTTGAATTACACTTTTAGCCAAAAGATCGTT
TGCATGTTTTTCTTTGGTCATAACTAGCCCTTCTTTAATTTTTCTAACTTGAGTTCCTAA
GATAAAGTGCAAATCTCCTAGGTTTTTAGAGAAAACACTAACCTTGATCCTTTAGCTTTG
CTCTCATGCTCTCCTAAGAACTTGTGCCAATAATGTTTTCTGCCTCGAAGTGTTGCCTAA
TGCTCGCATATCTTGAATAGTGTGCAACAGCAACGCATGTAGACGGCAAAACTCCTTTCC
GTAGGCATCATACCAGTTCACACGAGGCTTCCACAATGTCAACAATTCTTCTACCAGTAG
TTGAAAGTAAATGTCGATATCATTTCCAGGTTGCTTCGGGCCTTGGATAATCATCGACAT
CATGATGTATTTTTTCTTCATACACAACCAAGGACGAAGGTTATATATGCATAGAAGCAC
CGGCCAAGTGCTGTGTTGGGTGCTCATATCGCCAAATGGATTAAATCTGTTAGTACACTT
CCCTAGCTTAGGATCCTGTGCAAAATCTTTAAACCTCTCCGTGATATGTTCTCACCGAGC
CCCATCTTTCGGGTGCCTCATATATTTATCCCAAGTTCGCTCATCATGATGCCACCGCAA
CCTCTTNNNCTCTCTAGGATTTGCAAACAAATGCTTCAACCTTGGAATTATAGGCAAGTG
CCAAACAACCTTGAACAAGATTCATGTCTTGATCTCTCCATCAATTTTGTACTTGTCGTT
CGCTCTCGTGTGCTTGTATCGTGCATGCTTGCATAGGGACATGAACGCAAATCGTTGTAG
GCACCACGGTACAATATACAATCATTCACGCAAGTGTGTATCTTCTGGACCTCAAGTTCC
AATGGACAAACAACTTTCTTCGCATCATTCGTGCTTTTGGGAAGGACATTATCTTCAAGA
AGAGTGTCTTTGAAAAGACTCAACAACTATCTGAATACCTTATTTGATAGACCACTTTCT
GCTTTAAATGTGAGAAGCGCCAGTGTGACACTCAACTTGGATTTTTTTGCAACCTGTATA
CAAATCTTTCTTGGAGGCCGCATCAATGGTTGGTAGCTTCTTGTACTCGGCTATATATGC
TTCTAAGCCCTCAAAATCTGCAATCATAGCAGCAGAATCTGACATATCATCAAGGTTGGT
ATCGTGTTCTTCAAACTCTTGGTTTTTCTTTGGGGTTTTTGACATTCCACTCTTCTGTCT
ATAGCTTGACGTCTGAGCCCCGAGGTTAAATTCAACACCCATGCGACTCTGATTGGGGTT
TGGCACCTCCCCGACATGCATGTTATTACCTTCATCCATAACCTCTTCACCATGTCTAGT
CCATCGTGTGCATCCACCCTTGAATCCCCTCTTATATAAGTGTAACTTGACCACATCAAT
TGGAAGTGACACCGTATTGGTACAATCCTTGCATGGACAGAGGACGTAATCTTCTTTGTC
AATTCTCTTCTTTGTTTGTTCAGCGAAAGCCATGAACTCCTACATGCGATCCACATACCT
TGAGCTTGTCCGACCCCCTTCCATTCAAATTGTTCTATCTGCACACGTGATGGGTAGTTC
AAAAAAACATTAATATATGGATTATGGATGCACAAAGATGCGTGAATAAATCATAAGATT
TTATTTTCAAAATTTATAGATGGCGCTAGATAATGTTATCCAATCGTGCGATGACACTAA
TCATCAGCCAATTTACATGTATCATCGGTAGTACCCTTATATGCATTTAATACCTTAATT
ATGCCACTCAACAAAAAGAATACCTTAATTAACACCAACATGACGAGACAACATGGTCAA
GGAGTAGAGCTTAGCGGGGCACATGCGTGAAGTTCAGGCTCCACTATCCTGCCTACGACC
GCGATGGACGTGCTCGAGCAACGCTGATGCCGACCACGAGGATTGAGCTCTTGCTGTATC
TCCCATCGCCGACCGAGGATTGACCTCCTATAATGCCACCACTGCCGACCGACCGAGGAT
GGACTTCCTGTAACGACGACACCGCCGATCGATCGGGGATTGACCTCCTATCCGGTAGCC
GCTACCTCGGTCTCCATCAACATAATGTTTTTTGGTTTTCGGAGAGCGGATGTTTACTGC
CCTATATATATCGGGTAGCACATCACAAACGGTCATGTTCCATCTCACACGATTTGGTTT
AGGAAACCGTGTGCCTTATACAACAAAGTGCGATAAATAGTTCCCTCGACCGTTATGAGT
TCCCCATAGTTTCCCCGTCTTCCCCAAATTGCTAAATAGCCTCCAAATATGTAGCCCCTA
AATACCCTAGTGTGGCGATGATATTGGGGGAATGCGAACGAGTGGTGCTGATGGTTTTAG
TGCAGCTGCTCCGGCTCGTACATTCGCTCTTGGCAGCGCCATTGGCGTCGCTACCACGAC
GGCGGTCACCGATGAGCACTTGCCAAAGGTCATCCGGAGGCTGGTGTACTACGGATCCGA
ATCATCTTGTCAAGTCCCAATCATTCGTCATCTTTTTAGCATGTCCAAATGCAAGTAGCT
CACTCAATCCGTCCTAAATTGGACCCTCATATCTCTTAGGAAAGTGATCAATTGCCGGAT
CCACATGATGACTCCAGCAGATTCCTGCGACATGAGTTTGATTCCGAGTTTTGCGCCATC
GAGAAGTACCAAAAGATGAGCTGAGTACATGGACACATTCCCGCTCGACGTGAATGCATG
GAGGTATTCAACATTGACAGCCGATTTCTCAATTGTCCCTTAGAGGTTAGTGATAAGTTC
ACCCCTTAAGTTTAGTTAATGCCCCCACTCATCCTAATTATTTGACATTCACACGGATAT
GAGGCTTGTGCCTTTGTTAACTGGTTGGATGATGAATGACATGGTAGGGCTCGGAGTGTT
ACCACCGAGCTTGCAGAAGATAATGTAAAGCTGAAGAAGAAACTGATTGACCTGGAGTGT
ACAATAACTACGATGAAGCAAGAAAGAATCAATCACACGCAACAGATGAAAGCAAGAGAC
ATGAAGGAAATAGCGTGTGTGGTTGTAGTTGCCGCATTAGCCATCTTCTATGTGTTGTTT
GCAATGATCATTAGGGGTTCTGTTTGATTATTAATAGCTACATCAATAAGCAGAGCTTAT
CTATTGCTTACCAATGTCCTATGTTAAATGCTTGTTTCACACCCGTTATATTTCATATAA
GCGAGCGGGTAATTAAACAATGCATCTAGCAAACTATGTGAACTGCTAAAATGTACACAT
GTGAAACAATTGGCATATTGCACAAATTTGTACGCTCCAGCCCTTGTGCGTAATTATCAC
ATTAAGAACTGCACAACAGTGGGAATTTAGAGTGACACGTTGGGTACACACAATTGCGGT
TGATTATATCGGAATTCTAACCGCCTGCCAAGGCGCTAATATAATCCGTGAATCCCCCGC
TTCAATTGACATTCCTCTTGTCTTCACACCGCGCTTCAGTTGCCACCATCTTCATCGTCT
CGGCCGACCACTCTCCACTTCCACACACTCTGCAATCTCGATTTCGCGCTAGTTGTTTAA
TTACGTAGCACAACAATGTTGAGTGGCAAGGACGACCGTTCTGCCTGTCTCGCTCCCAAT
CTAGGGTCAGCCTCAGAATCATCACACTCGTCTTCCATGAGTCCAGCGTTGAGCCGTGAC
CTTCATTTCATCCGGTTCGTGGAAGGGCTGCCACCGCCGCCGGAGTCATCGGACAACGAC
CAAACAGAGAAGGATCCGCCCAAGGACGAAGATTACGACAACGACAAGAATGATGAGGAA
TGGTCGAACAAGGAGGATGACGACGAGGAGCCGTCGAAGGACGAAAAATACGATGACGAT
GATGATGAGGAGGAATGGTCAAACAAGGATGACGACAGTGAGGATGCGTCGAAGGACGAA
GAAGATGACGACGACGAGAAGGAGGAGGAATGGTCGAACAAGGAGGACGATGATGAGGAC
ATCAACAACGATGGTGATGATGATGGCGATGAAAAGCCAACGGTCAGTGGCAAGAAGCGT
CCACGTCAAGATGATGGAGCGGGGCCATCCAACAACAGCAACAACAAGAAGTAAAACAAA
ATTTACTCCTTAACTCTATTGTCGTTTGCTCATATTTATACCTTAACTCTATTTACCGTC
TCGATCTCATCACAAATGGTTAAGAATATAGATTCATCAGTGATCACTCACAATATCGCA
CACAGTTGGTTTCTTGAATTGTGTGCCCTATTGAGCACACATTTCAGAACAACAAATCGT
ATGTGTTGTTAATCTCACCACAAAGAGTTCATCAGAGGGAACTGTATGCCTTCTACAACA
AACAAATCTAGATCAGCGTAACTGTTTGCGTTATATTGTGTCTTCGCAAACAGTTCTACT
CTTTGAACTGTATGTCGTACGTCGCACACATCTATGTTTGATGAACCGCTTGTGCATCTC
ACCTCATCACAAATAGTTCGTAAAAGTCAACTGTCTACCGTATATCGCACACACAACTAT
TTTCTGAATCATATTTGATGGGTCCACCATCGCAAATAGTTTGTGTCATTGGCGATGGAA
CTTTAACTATACCATTTTTGATTCATGCATCACACACGGTTTCATCGAAGGGTCTCTGAT
TGATGTGTCATCTTTGAACCATCCTATAGTAGTGATAGCTTCCATCGGGATGATGTAATG
GACAACGAAGATGATTTCCCCCTCTCGTAGGGTACTGGAAATGCTCAAGATGGGTTTTTC
TTTGATACAGTGAGTTGGGGCAGCGGAGCGGAAGTTCTCTCCTAATTTCTCAGGGTTTTG
GGATTTATAGGATTTTTCAGTGTTGGAACCACGCCAGCCGGAGCCATGTGGGCTGCACCA
CACATGAGGGCGCACCCTGTTGGCTTGTGGCCCATAGGTGCCCCCCTCCGATGGTTCTTC
GCTCCGCTATTTCTTTTTATCCAGAAAAAATCATAAAAAAGTTTTGGGTGATTCCGAGCA
CTTCTATTTTGTGCACAAAAACAACATCACGGTAATTCTACTGAAAATAGAGTCGGTCCG
GGTGAGTTCTACATAAATCATAGAAAGTGCATCAAAACCATATAAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCGATATGTTGGAGATGTATCACACATA
TTTGTATTGTTGCCATTAAGGATAAAACAACAGGATCTGCACATATTGCTTGTCTTACTT
TGTCTATATCATGCCATCTTGCTCCAAGCATTANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGTGGAGTAATAGTAGTAGATGTAAACAGGAGTTGAAC
TACTTGTTTATGGACTTGATGCCTATATACATGATCATTCCCGTGAACAAGATGTCAGAA
CGATGCGTTATTCTGTCAATTTCCCACAAATAATTTGTTTACCCACTGTATGCTATGTTC
AAGAGAGAAGCCTCTGGCGAAAACTATGGCTCCCCGAGTCTACTTAAATATATTTAGTAA
AACCTGATTTACTTTGTGTAATTGATTTACTTTTTATTTCCTTTTATATTTGTATTATCT
ATGTGTCAGTATTAAATCCTTGCAGATAACCAGTTCAAGGGACTTGACAACCCTCTTGCC
CGCGTTGGATGCAAGTGTTTGGTTCCGTGTGCGTAGGTGGTGTTGAAGGAGGTTTGCGTG
ATTCTCCTATTGGTTCTATAACCTTGGTTCTCATTGAGGGTGAAAGTGCATGCTATGCCC
CTAATCGACTT
