Contig Data
morexGenes
Links



Map Locations of contig_275347 (4347 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_275347

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44778 1 664 bp AK371214 Available Available None





CDS Structure of MLOC_44778






Contig Sequence (4347 bp)

>contig_275347 4347 assembly3_WGSMorex_rbca.fasta
CCGGGACTAATGGGCTGGCCAGGGCCGNNNNNTAGCCCTGTTTTCTACTAGTGGCGGCGG
CAGAATCCTCTACGGTGCGTGTTCGCTCGCTTGTCGCAAAGCAGAGGAGATATACCTGAT
CGATAAGTGACTGCGCTATTGATTACCCGCGCCACTATTAAGGTTTCTTTTACTGGTAGT
GTTGGATGGCTTTTTTATGATCAATTAATGATCGTATCGTTCATCTAGATATTTGATATG
AGTTTAGGACGCTCTGATGTAGATTCTCTTACAGCATCTACAACCGGACGAGGATAATCC
ATCCTACTATACGTCCGCGGGCGCGTCCGGGCACGTCCGTGAGCAGTGGACCAAGTATAC
GTACCATACCAATCTCCCATGTGTGTCTCCTCACGGCGGCAGAATCCTCTACAGTGCGTG
TTCGCTCGCTTGTCGCAAAGCAGAGGAGATAGACCTAATCAATAAGTGACTGTGCTAATT
ACCCGCGCTACTATTAAGGTTTCTCTAAGTAGTGTTGGATCGTCATTTTTTTATCAATCA
ATGTCCGTATCGTTCATCTGGATATTTGGTATGAGATTAGGACACTCGTATGTAGATTCT
CTTAGAGCATCTACAACCGGACTAGGATAATCCAGCCTCCTATACGTCCGCGGGCGCGTC
CTCGGGCAGTGGCCGTCGGTCCCTCATATATTGTCATATACCAATCATCAAATCCATGCA
ATACAAGCACGTGGAGCACCTGCTGTAAATTGTTCGAATTCAATAGTTCAAAAAAGCAAA
TAAAATCATAGTTCGACTAACCGGACAGGTCAAAATAAAATCAATGTTCGAGCAACAAGG
GATGCTTGTCCGATCACTAGCCGGACGAGTTTGTCCATGCATCCTTCTGGTCCAACTTGT
CCTGCTTGGCCTGGGCAGCCATCTTTGCCTGCATCTGATGGTCTCCTCCAATTCATAATC
TATTTCGACTGTATCATCATTGTCACTAATCATGCTTGCCAAGTACGCCTCCTACACGAT
CATGGTTTGCAAGTATTCATCATGTGTGAACTAAATCTATGCAAAACATTGAACATTTGA
CCGGACAGGAACAAACATAACATACTCGGTCTTGTTCAGACATTTCGTCGAACATGTGGA
GTGCAGCCTGGGCGGTGGCGGTCTCCGTGCTCATCCGCTCCCGAACGAGGGGCGGTGACT
AACACTCGTCGACAGTGGCGGAGACAGGGGGGCCAGCCACGGCCCTGCCCCCCTAACATT
AGTGATTTAAGCTTAGAATGAATAGTAATAGTTATTTTTTTGTGCTAAAATGGTGGTTTT
TGATGGATTGGCCCTCCCTCACAAGGTTTAACTATATTTGGCCTCTCTTGTCCTAATTTT
CTGGCTCCACCACTGCTCATCGATCGCCGGCTTTTGCGTGGGCGAAAAGCTGTCCGGAAT
GGCCCAGTCGGTCGTTGCATCCTTCTCCATCCCAAGGGTGTTGGACGGCATTATCCGCAT
TCACACGTGGACGAATGGGGTAAGGGGAGCCGGGCATGACGGGGGAGACAAGTTTTGGAT
GTTGTTTGCGCCTAGCTACGCTGCCGCCTCCGCCTCCCTCTCTCGTTGTCGGCGACACCG
CATCTTTCGGGACGCCGCCTTGCAAGACGAAATGAAGGAAGGGACGCCGACGGACGAGGC
AGACTGCATCTCCGTCACGGCGGTCGCGGACGGGCTGGAAGACATCCCGACGGCGGATAG
GGACCGATGGTAAGGATGGGGAGCAAGGGTGCCAGATGGCGCGGGCTTAGACGTAGGAAA
TGTTGGAGGCCGACGGGAGGAGGAGGAAGGATATGCAGAATTTGGGGTAATTTACGGTGA
GGTCGGAATGTCGGGTCCGACGTGACGGGCTAGCCCGAGCTCCTCAATATCCTTCTCATA
TTTGAACTTGATATGATGAATGCCGAACTAGCTGATCGTTTAAGGTCCGTTTAAGAAATC
CGTCTGAATCGAAACTTTATGACCGATAATAACCGAACGGGCCTGCACGGACGAGACGGT
TTTGATAAATCTGGTATTAAAGTGGAGACAGTGGACTAAATCCGGCATTAAAGTGGAGAC
AGTGGTCGTGCCTTGCGTCGCGCGGCAACGCTCCGGAAAACGAATGTTTGACCACACACG
AGGCGGGCGCTGGTGACACCGATGGTCAGTGAGAGTGGGCCAAATACGCACCATACCAAT
CTTCCACGTGCGTCCCCTCGCGGCGGCAGGATCCTCTACGGTGCGTGTTCGCTCGCTTGT
CGCAAAAGCAGAGGAGGTAGACTTGAACTTTTACGTCACGCGTGACATGGCCTTCTCCCC
GTGCTCGCCAAGTTCCGCTCAGCTTCAGCTTGCATGCCAAGTCTCTCACAACGGCCTGTA
TAAACGAGCCTCAACCGAACCCTCCCACAACTCCCAAAGCATTTGCAAACCATCATCCAT
CCTAGGGTCCCGGTAGCTATAGCTGCTTACTTTAAACAAGGAAGAAGAAGCAGCGGCAGC
TCAACAAGAGTTCAGGAGAGGGACATGGCGTCGATGATGGGAGGAGACTTCGTGGAGGCC
TACGTGCTCAAGAACGCATACAAGGAGAAGATGAGGCGCATGGACCAAGCCGAAGCGGGG
GCGCTCGACGGCGCGAAGAACGGCAAGGAGGCCGCCGGCGCCGCCGGAGAGAAGAAGGCT
GCTGGTGGTGGTGGTGCGAGCAGCAGGGGAGGCTTCTTTGGCCTCATGAAGAAGAAGGTG
CACCCCAAACCCAAAGAACCGGCGGCGGCGGCTACTTCCTCTTGATTGTATTACAGTACT
GTATTTGCCATGCCACGAAGTTGTAAGACGCAGCTTTTCTTTCTAGCTAGGAGCGTGTGT
GCGTGTGTGTGTGTGTTAGTTCTTCCGAATCGGAGGAGTGTGTAAAGCAACTTCTTTTGT
TGATTGGTCAAACAAAGTTGACGAAAATTTAAGTGAAGAGTAATCCTGCATATTAGTTGA
GTTGATCTCCGTTTTTACTTGTCTGCACTACATTATTAATTGAGTATGAAATGTTAGTTA
GTCAGTACTGACATGTGGCTCCTCGGTTCCTCGTTCGTTTGGGCTAAGCAAACCAACCTT
CGATTCTCATCCGTGCATCCATGCAAGGAATTTTAATGTCATGGGTTGCTACAAATATCA
TCAATTTTGTCTTGATTAGTGTTATTGGCCTTAATAGACCTTTGATAGTAATGATCTTAG
GCTGGTTGTTATTAAGGACAGTAAAACTGCACCACTTTCCTGCCCTCACAGTGATTAGAC
GTTTCTGGCCATTGGATTTCGTTAGCAGGAAGTTTCTGGCCGTCGGATTTCGTTCTTAGT
CTAGCTGATTCGCGCAGTCTGTTGAATTAAGCCCGTCTGTCCTGTGGGCTGCTACTCCAG
AGACCAAAACCAAGACATCTGGTGCATGGGCCTTCCGCCAGCCCATTAGTAGGCGGCCTT
TGCATCCCGACAGTCTAGTCCTTCAGTTCGCTACTCCTATCCAGTCCCTCCCGTACGAGG
CTGGGGCGAGGGTGTTGACCCCAAGCCGCACAAAGGAGGGAGCGCCGGTGCAGCGGACCC
GCAGAGCGTCGGTTCCATCCAGGGATCGAGTCGACTCTTCGACTGGATCCCGGCGACCGA
AGGAGAGGGATCCATCCACCCTCACCTCTCGTCCCTCTCGTTCTCCATGAGGGTATCTAG
CAGTCGTGCTCCAACCATGGCGCCACGAGGGGATTGGCGAGGGGATCCAGCGCGAGCTGA
CCCATCTATCCCGGGAAATCCTACTGACCTCAACCTTGGGCGGATTCTAGGTCCGTCGCC
GCCACCGGATCGCAGGTCCTCCATCCCGAGGTTTCTCCCAACCCCGTATCTTTTCTCCAC
ACCAATGTAAATTCTAGCCCAATCTCTATCAGTTGTTCGAATCTCCAACACGGAAGAAAG
AAAGGCAATCGTTACTCCCACATGCTGGTCGAGTGTCAGATTAGTGGTGGTGAGTTCTGC
AAGAAACACAACTAATTGGTGGTCAACATGGTTCTGGTCAAATGATTCACGCGAATATTG
TGGCTGATTCTGATATTCTGGTGCAGGGAATTTTTCAATCTACAAGGGTTACTAGCCAGG
TAATTACTTTCCTTGACCTACCATACCACACATCTTCATGTTTACAGATCGTGCTAACTG
GTCAAGAGCCTAATTACGAGGTTTTGCAATCGTTATCTCCCTGAAATTATATTTTTCAAT
TTTCCGTCTGTTCACCTGTTATACAAAGTAAATTTTGGGATCCATGTACAGGATTGAAGC
TTTTTTTAAAGTACTGGTACAAGATGG