| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_275313
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_44755 |
2 |
2573 bp |
MLOC_44755.2 |
Available |
Available |
LOC_Os08g33820.1, FRAME:+3, EVALUE:2e-137, 13108.m03529 protein chlorophyll A-B binding protein, putative, expressed |
| MLOC_44756 |
1 |
666 bp |
None |
Available |
Available |
None |
| MLOC_44757 |
4 |
3468 bp |
MLOC_44757.2 |
Available |
Available |
LOC_Os09g24570.1, FRAME:-1, EVALUE:0.0, 13109.m02332 protein growth regulator related protein, putative, expressed |
CDS Structure of MLOC_44755
CDS Structure of MLOC_44756
CDS Structure of MLOC_44757
Contig Sequence (9522 bp)
>contig_275313 9522 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGCGCACCCTGTGAGCTTGTGGCTCTCCCTACGTCTTCTGGCCTCC
TCCCGAACCTTCTAGGGGTCCCTTTTTGGTCCAGAAAGAATCATCATAAAGTTTCATCAT
GTTTGAACTTCGTTTGTTATTGATTTTCTGAGAAGTCAAAACACGCAAAAAATAGGAACT
GACACTGGACACTCGGTTAATAGGTTAGTTCTTAAAAATGATATAAAATAGCATATAAAG
CATCCGAAATTGATAATATAATAGCATGACACAATAAAAACACCATAAATACGTTGGAGA
CGTATCAACGCTCTACATCATTACCCTCCTCGGGGCATTGTCGGGGAACACAAATATCAT
CCAGTTACAGCACATCGGTGCCTTCGGCTTCGTCGTGGAGTGGATCCGTTGATCCCCTAT
CATTTACACGTGTCCTCGTAGTCAATGTCATTGGTCCTCGCTATCTGCTCGCAGGATTGG
AACTCCACGGATTGGATCGACACTTACTTTCTCCGGCGATAACTTGATGTGTTTTATGCA
TAATGGTCTATGATTTTCCTAGGCGGCACGGTTGAGTTCCGATTCAATAGTCTAGGTCGC
CTCATGTTAGGTGTGGCGACTCTTATTTTCTTGTTCGATTACGGGATCGTGACGGCTCGC
CGCGACCGCCTTCTATGGGGTTCTTTCCATCACCTTGTATCCGTTCGACCATCCGTGCCA
TTTCTAGGGCGAAAGCCGGTTTCCCGTGGAAGAGCTCGAAAGTTGAAGCAAACAGACCAA
CCCGCCATGGCACCATGTACAGCTGTACATCATGACGGATCGTCCGATCGACGTGGCAGC
CAGGTAAACCGAACGTGCGTTTCCCCGACCAATAGCGATCCCCCTTTTGATTCCGCATTA
TCCATCATCCAGATAACGCACATACGCCTCCCGGTCTCCCACTGGTCCATCTATCCAGTC
TCCAGGCGCAAACGCATCGCAGCCGTCGGACGACGCGGTGGCGCCAACACACGCCGTCCA
TCTCGACCTCCGGGGCCCAGCTCACCACACCCACAAATCACCGAAGCGCAGCCCAATACA
AAGGGCCAAGCGCAGGTGCGGAGAGGCAGAACCACCACACACACACGCGCGCACTCTCAC
TCTCCTGCCGTACGCGCTCTCTAGTCAGGAGTAGCAGAAGATGTCGTCGGTCAGTGCCCG
CGCTCCCGTGGCCGCTCTCCGGCCGGCGGCGTCAGCGTCGAGCCCCCGGTTCCTGGGCGA
CTCCGGCCGCGTCGGGCTCGCCAAGTCCACCCGCCGCGACGTCGCCGTCCAGGCCAAGGG
GTCCTGGCTCCCCGGCCTCCAGTCCCCTGCCTACCTCGACGGCAGGTGAGCAGACCACAC
GACACGCCACACCACTTCCGTCGTGCCCATGCACGCAGCTGTTACATATGTTTACGACCG
TACTGACGGACGATACGTGTGCAGTCTGGCGGGTGACAATGGTTTTGACCCGCTGGCGCT
GGCGGAGGACCCGGAGGACCTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTG
GGCGATGCTGGGGGTGGCGGGGATGCTGATCCCGGAGGTGCTGACCAAGGCGGGGCTGCT
GAACGCGCCCGAGTGGTACGACGCCGGCAAGGAGACCTACTTCGCCTCCTCCTCCACGCT
CTTCGTCATCGAGTTCATCCTCTTCCACTACGTCGAGATCCGGCGGTGGCAGGACATCAA
GAACCCGGGCTCCGTCAACCAGGACCCCATCTTCAAGAGCTACAGCCTCCCGCCCCACGA
GTGCGGCTACCCCGGCAGCGTCTTCAACCCCCTCAACTTCGCCCCCACCCTCGAGAACAA
GGAGAAGGAGCTCGCCAACGGTACGTCCATCCTCTCTTCAGTCTCATCTGAACCCTCGGG
TTTCTAATCCGACGGCTCTCGTTAATCTGTATTCGCGCGCGCGTTCATTCGTTCAGGGAG
ACTGGCCATGCTGGCGTTCCTGGGGTTCCTGGTGCAGCACAACGTGACCGGGAAGGGGCC
GTTCGAGAACCTGCAGCAGCACCTGGCCGACCCATGGCACAACACCATCATCCAGACCAT
CTCCGGCCAATAAATCCGTCGATTTCACCGACCAAGGAGGTTTCAGGTGGTCTGAATTAT
TATTTTGGGGTGCTGAGGATGTACAAAGTGTGGAGGAGTAGGTGGCAGTGCAAAAACGTG
TTGTAATCTTAAAGTTCCGGTGGTGAAACTTTGTCCTTGTGGATTCGCCCATGGCTTCCG
ACGGAGGCTGTACTTGTAATATCACCCATGCGTGTTATTTTAAAACATGGCAAAACATAC
TACTAGTTTGAAGCATTAGTATCGAATTCGCCATGACGATAGTAATACTAAATCAAAGCA
GAAATTCAGAACACCGGACTCCCAGAAGTAGAACAGCGGAATAAAAGAAGAAAAAGGATC
CAGTATATCAAGTCAGGTCACAGATACACAACATCAGCTCCAAAACTACAACTTCGTCGT
ATGGATCGTGCAAACAGCACAAGATTAGAGTCCTTCAAGGCTCAACGTATAGTGCGTAAA
TTTTGGTTAAAATTTTAAGATCCTATTGGAAGTGGCAGCAAACTGATTCAACCGAAAATT
CAGAACTAAATATACATATCCACATGAGCTTAACCTAATTAGAAACTGCAAGTAACTCAG
CACATTTCTTTTGTCGGTGCACCGCAGAAAACTTGGCGATCTACCCTGGGCACATACAAT
CTGGGGCAGGATAAGTATAGATAGACTGCTTCGGCTTCCTCAGCCGGATCTGCCCGTATC
TACCTTTGTGGCCTGCCTGCACAGCCTGCTGAAACTCTGACCACTCCATGCTCTTGTTCA
CAAATATGTGGCCAAGCAATGTCATGTTTGGCCTTATCGTCTTCAGATTCCTATAGGTCC
GGTGGGCCAGCTGAATCAACCATCATCTGGTCAGGACCAATAAAGAAAGAGGAGAAATCT
AGCGAATACAGCTGAAGCCAAACAGGATTTACCAGTGCATTATGCATATTGCCAGGAGAA
GCAGAGATGAAAACATCGCTGTGCATGCTGATATGGTAGTCAAGAGCTGCTAGCACAGAA
GCCTTCCCTTCGATACTAGCAAGCTCATCTGCCGATGCAAGGCTCCTCTTGTCTACCATC
AGCGGGAAAAGCTTGCGCAAGCTAGAGATCCTAGCTTCCCCTCCATATACCTTAATAGGT
GACGTATGTTAGAAATTTCTGCTTCCACTACGGAGAATAAGTAAGCGCACCGGCAGAGGC
AGAGAGTCAAACCTTGTGAGAGGCAAGATAAAATCGAGTTTTGCTGTCAAAGCCAAGCGC
TACTAGTATCAATCCAATCTCTTCTGGAGTCAACGGGCAGCGTCCTGTGTTTCGAAGCTC
CTCATCACTTAACTGTGAATTTAATACCCTCCCTTGCCAGATAACTTGCCTGTACTTAGC
CAGAGCTAATTTTTCAGCTCTACCACCGCCAAAGTCACAGGCAGAATGTGCAGCCATATC
CTGAAAAATGTAGGTCAGCTTGAGTTGTTTCAGAGTGGAAATTCCTTGAAGATAACAAAA
ATATACACGTACGACTTCCAAATATAGCAGAAGCCCTTCCATTTACCTTATCGAAGCGGA
GATGTACAACTGCATACTTTTCAGACTGATCTGTGTAATCTTCTACAACTTGTTGGGTTA
ATTCAGTGGAATGCCCCTGCACTGGAGATCTCAAGCGCTTCTCAAGGGTCCTCCCCAGTG
ATATAATGTAAGGCACAAAAACCAGGGCTTCAAAGTTAACTTTACAGCGCAGGCGTTGAA
TATCCACAGGCAAATCATCGAATGCAAGGCGGTGAGAAAAGGGGGCAATGGCAGCAATGC
CATAGCTGACAAGGGAAACAACGCTTGCATGAGATTTTCGGTGAAGGATTCCCCTCACAG
AGTAACCAACTAATGAAGTTAGACAACGAGTTGTCATGTTAATACTATAAAGCCAGTTCA
GTGGCCATCAACCTGGGCTAAACATGAACTGCAGTTTCTTAGCATTATTATGCCACTTAC
TCAAGGGGTCTAGAGAAGCGACTATATGGCCAAGAAAATCACAAACCTTTGCAGGATAGG
ACTGACATTCTCTATATACCAATTAGCCGAGGCATGAAGAGGTGCAGTTTTTATTCTTGT
AGCACGTATTCCTGTGCTATAGAACTCTCTTGTGCTCCACGAAAATTCTTTTAATGGAGC
TCTCACTATTGAAACATCGCCTCTTAGGGTGTTGATGAAGTGATCCACATTAAAAATATC
TCCAAATGAGCTGCAGACCAAACTAAACCTTTCACTTCCAATCTAACAGGAGTATTTAAA
ATTAACAAGATACAGTAGTACTCTGAAACTCCAAAAGCACCTTGAGTCTTTCCAAACAGG
GTTTACTTCAAGATGTGGGATCACAAGAGTAGCGTTCAAAATCTTAGCAACCGCAACTGC
ATCACATATCTAGAGAACAAAAAGAAAGAGCCAGATGATCTGAAGTTTCAACCAAGCAAG
TTATATTAAATCTAACATCATGAGTTTGGTACATAAGAAGTGAGTTACCCCCATTCTCTG
CTGGTTCAGGCCACCATCAAGAAATACTTGTATGTACCCACTGGGTTGTGAAGGTAACCC
TACACTTCATATAACCAAATGCTTAGTGATCTATCGCAGCGGGAGGCATATCATTACCTA
AACAGATTTATCACAGAATGTTACCACGAGTGATCGATGACCTTATGCATGGTTTCCACC
CCTGATCAGGCAAGGGTGTCCAGAGATCTCTTTTTTGTTCATCTGGCTGTACAGAGAGTA
AGTTACAAATAGACTTCAACATAACTATTTCCAGTATTTATCTGAGTTGTGAATACTCAC
TATTGTCCATCGCAAAGACTCATTGAAAAGAGACTCGTGCATTGGCTTAGGGGCATTCCA
CTCCTGCAGTATACACGCTGTCCACATGATTAATCTTAAAAAGACAATATTGCAGTCTGC
AGAAATATTTACTAAGGTCCACATCAGTAGCCAATCTATCTTCACAGCCATAGTAGAGTA
ATCCAGTACACATGTTATTCCCAATACTGTCATGGCTCATGGTAGCCGAGTACAGTCCCA
GCGTCCCACACTGCCCCGAAATGCATACAAAAAAATCTACTCGTAATCACACATTGGAGA
CCACTGTCCAAACCAAAATATCCGATGCAACTGGCATGATGCTGTCCATCAAAAGAATCC
AGATCTTGCAAACTTCGCTTATTTACAGGTTGCACACTTTGCTTATTTACAGGTTACTCT
GCATCGACATACATATACACCAAATAAACAAATGTAATTTCGTACTAGTTCCAATTCAAG
AGGGGACAAAGCCACGAATTCACCACATCATTTCACCTTCCACATACATTCCTCCCCCCA
AAAGTACCAATCCCTCTAGATTATATCCAATTTTCGCCCACCCCAAACAATCGGACTCGG
CAAAGTGGCGAACTAGCAAGGAGAGGCGTAGGAAGCAGCTAGAGAAGCGGAAGATCGCCA
ATATGACGCTACACCGGCTCAAATCGAGCCGCCTGGAGAGGAGGATGGCGACTATAGGGG
ACGCACCGAGAATAGGGAAGGGAAGGCGCGGCCGAGCGGGGAGAACAGCGCGGGGAAAAT
AGCCGGGAGGAGAACGACAGCGGCTGCTGCAGCCAACGCCGGTCCCCTCGCCGGAGGCGA
CGAAGCCGACGGCCTCCGCATCTCCCCGTCTCAGAGGTGCGAAGACCAGGTGGAAGAAAA
TCCTACAATGGACGACTGACCTGACTAAGCCCGGCTACGAGGTGGAAGTGGGCCTACTGT
GTTTGGAACTGGCCCATCCATAACGAAGCATGTTACCAGACTAGGGGTTGGCGACCATGT
GTGGTTAAGCAACCCGATGATCCTGCATTTATTTCTGTAAACATTGATTTCAGTTAAATA
AAGCTTCATAAGATTGTTTACAAAAAATATATCATGTTAGTCACTTAGATGCAAGACATG
AACATATTAAAGATGACTAACATGACAAGCATGAACATGACGTGAACATACACATTATAT
AGGGTAAAACTCATGTAGAATGCAAATGCATAAAAGCTATAAGTCAGTGGCTACCATCAT
GTCAACTTTGTAAGTCTTAACAAATCCGATCAATTATATTATGACGCATTTTTGCAACAG
AGATTTCATCAAGAAAATTGATCTTAACATCGATGGAAATGACACCATTGCGTAGAACAC
AGAAAAATACACAATATTCATATAAAACATATTTTCATCGGATGCAAGGATTAAAAGTTA
CATCAATTTTAATATAAAATAATGTGGCTTCTTTCAGCGGGTGTCATATAATGTAGAGTG
ACTCCTTTCATTTAAACATCATACAATCAGAATTATAACCTCGGATGCCACGCTTATCAG
AGGTGTAGCGCCTGTAGATCAAATGCTACACGATGTACAACCGGGCGCCACACAAAGAAG
ATATGCATGTGAATTTTCATGCACGATTCATTTTGTGAATTAGTTACATCTACAATTAAA
ATTGTGTCCATTTTATGGTAATCACCTGGGCCGACTATTAACAAGTTGCACCATTCCGGT
TTGGGGAACCTTCTATAGTTTCTCAGTCGTTTTTTCTCCTAGAAGGTTCCTCCTGTTTCT
TCTACGTTTTTGGATTTTATCTTTTTTAGATTTTTGTTTGTTTTTTCTTTCTTTTATTTT
CTTTCCCTTTTGCTGTTTATTTTTTATTTTTTTAAATTGCGAATAATTTTTGAAATTGGA
ACATTTTTAAAACTCCTAAAAAATGAAAAAGTAAACCAATTTTTCAAATTCAAACATTTT
TTTGAAAAACTGAATATGTTTTAGAATTTCAGAAAATATGAAAAGGAACATTCCAAAATT
GTTTTCAAACAAAGAACCTTTTTTGAAATTCCCGAACATTTTATGGAAAAAACAAACAAA
TTTTGAAAATGTGAACATTTTTTGAAATTTCCACAGTATTTTTGAGTTCACGAACTTATT
TTAAGTCTGTTAAAAAATTTAAAACATGAAAAAAGTTAAATTCAGAAAAAAGAAGTTAAA
AAATAACATTTTTTAATGCAAACAAAATTTGTATTGTATGTTTTCTTTGGAAATGCAAAG
AAAATTTGAAACATGTGAACATTTTCTGAAATTGCAAACAAAATGATGAAACCACGAACA
TTTGTTAGACATGAACATTTTTTGAAATGGTTAGAAATTTTTGAAAAGAGAACATTATTT
GAAACGCGAAATAGTTTCTGAAATTGTGAACAAATTTGAAATAGGAATTGATTTTAAAAT
TCCTGAACTTTCCTGAAACATGAACAATCTTTTTAAATTATGTACAAAATTTAAAAACAA
GAACCTTTCTGAAATTTTGAAGAAATTTGATAAATTAGTTTTTTTTAATTCCTGAAAAAA
AAATCAAACATCAACGGTTCTTAAAATTGTGAACAAGAATTTAAGACAAGAAATATATCT
TTAAACTTTCAAATAACATTTGAAATATTCCAACAGAAAAAATAGGGAAAATTAAAAGTA
CAAAAAGAAAAGCAAAAAAAAGAGAGAAGAAACGTGAACAAAAAAAGTAACAAAGGAAAA
AAACGGTTCAGGTTATTCTTGAAGGTTCCCAAAATCGATAACAAAAGAAAAAAATATCTT
GAAGGTTCGTAAATCCGAAGCGCTACTACACGTTAACGAACCGACCCAGCTTTAGCTCTC
GATCGCGAGCCATGTGTGAAAGCTCGAGAGTTTGACGCAAAGAGAGACCAATAGGAGCTC
CCTTGTGTAGATACCGCACAAGCATCATGGGGTGGAAGCACGAGATAACTCCTCTGCTCT
TCTCCTCGACCTTCGGCACAACTCTTTCTCCTTTGACGGGGTCACTTACCATTGTCCAAG
AGCTTTTTGTGTCACCTAAGAGCAACTCTACAAGGCCCCGTGTAACTCCCCGGCCCACAA
AATAACCACCATTTTATAGTTTTAGAGTGAAAAAGTGTCTCGAACAAACTCGTAAATGCG
GCAGACCCTTTTTTTAAGGGGCGCGATAAAAGTGCCCCTCACACCCGCGAATACACATTT
TTCACCCCCGCCCCGTCGACGCCTTGTATCTCGCGAAAGCGGTTGGCGAGAGGGACATTT
CAGACCGCGCCAGTTCCCTTCCCCCATCACGCAGCGCCGTCGTCCGCCTGTTGCGTGCGA
TTTCGGCCAAACCCGCCTCGGGACTCACGTGCCAGACCGCTCCTGAGCCCGCTCCACCGC
TCTCCCTTGCCGCCCCACCGGATTCGTCGAGCCGCACCGCCCCTGGGTGCCCGCCGGACC
GGATCGACCCCCGCGGAGCCATCGCCGGCTCTGACCCGCCTCCTCCTTGGATTCAGAAGT
TTGCGGCCGCCCCGGGCCCACCGCGGGTAAGTCCTTTCGTGCCCTTGTTTAGCGACCGAT
TTGGCAAAGAAAATCCATTCATGTGAGCTCGGGTGCACCGTTTTTGTAGATGGATTTTAG
CCCTTGCGACGAGTTTTTGCTCGAGGATTCATCTTCGTTGGATGACTCAAACATAGAGTC
ATTGCTCGAGAGACATCAACAAAAAATGGTGGTGGTCGTGCTTACCGTGAAGGAGTACGA
GGATAGGAACCAGAAGAGACGGTGAGGATCTACCATCGGTCGCGTGTGCATCCCTCGTAA
TCGCCAACCTGGGAACGAGATGCTCATGCAAGACTACTTCGCGTACAATCCAACATATCT
GCCACACCTCTTCTGAAGAAGGTATCGAATACGCCGATCCCTTTTCATAAAATTAGTGCA
ATCTTGTGAGGCAAATTCTCGTTTTTTACTCAAAGGAGAAATGCCGCTGGCTTGAAGGGT
TTAACGCGTATCAAAAAAATCTTGGCATCTATGCGAGTGATTGCATATCGCGTTCCGGCC
GCTATGCCGACGAATATCTTCGCATTGACGAAGATACTACAATTTAGCCAGTGCCTAGGT
TTGCCAAAGTGATCTTCTGCGTCTTTGGCCATGTCTATCTTCGTGCACACAACGAGGAAG
ACACGGAAAGGTTGATGGCAACAAGTGAGAGGAGAGGTTGGCCTGGTATGCTAGGAAGCG
TTGATTGTATGCATTGAACTTGGAAAAAATGCCCGAAGGCATGGCACACGCAGTATTGTG
GCAAGTCTCATGATGCAACAGTTGTGCTACAAACCATAACTTCCAAGGATTTATGAATTT
GACATTGCTTTTTTGATATGTCGAATACTCTCAATGATATCAATGTGTTGCAACGATCTC
ATTTGTTTGCTAGACTTGTTAGCGGTGATGCTCCTGCTTGCAGCTACATGGTCAATGGGC
ATGAGTACTCCAAGGGATACTATATTGTAGATGGTATTTATCCTTGTTGGTGTATGATAC
ATCTCCGTCGTATCTATTTTTCCGAACTCTTTTTCCCTTGTT
