Contig Data
morexGenes
Links



Map Locations of contig_275278 (4936 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_275278

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44740 1 1071 bp MLOC_44740.1 Available Available LOC_Os06g31280.1, FRAME:+1, EVALUE:7e-29, 13106.m03236 protein THION1 - Plant thionin family protein precursor, putative





CDS Structure of MLOC_44740






Contig Sequence (4936 bp)

>contig_275278 4936 assembly3_WGSMorex_rbca.fasta
CACGCGGCGGCGAGGAAGGGAGGGGGAGGGAGTTGGGCGGCTAGGGTTGGGAGGGGGAGG
GAGTTGGGCGGCTAGGGTTGGGAGGGGAAGGGGATGTTTAAGGAGTGATATGCAACTAGA
AACTGATTTTGTCATTGTCACGTGTGGATAATGATTGTGAGTGGAGTTTAGAAGAGGAGT
GAAGTAGAGTTTAGAGGTGGAGTGTACCCCTTCAAACACACTCGTAGTTAACAGCTAGGA
GCTTTTGTTTTCGTCCGGCTGGCATGAACACGTAACATTTACAACAACCATCACTTGGAC
ATACCATGTGCCACAACCACCATCTCCTATAACTAAGAGCCATCCAAGCCCAGTCTCAAT
ACTCCCATCAACCAAAGCCTGTGTTCTGCAAGATAGCCTGCCAGCCATGGGAAGCAAGGG
CCTCAAGGGTGTGATGGTGTGTTTACTCATACTGGGGTTGGTTCTGGAACATGTGCAAGT
AGAAGGCAAGAGTTGCTGCAGGAGCACCCTAGGAAGAAATTGCTACAACCTTTGCCGCGT
CCGTGGTGCTCAGAAGTTATGCGCAAACGCCTGTAGGTGTAAACTCACAAGTGGCCTAAA
ATGCCCTTCAGGCTTCCCGAAATTGGCCCTTGTGTCAAACTCAGGTAAAGGGAATGAACT
CCTTCTATTCCATATTACTAGTTCTTTCTAAAATAAGATGTCATCATATAAAGCGTATGG
CCAGTTCGAGTTTTCTAAGTTTTCCGAATAATATAATGAACTTTTTTTAAAAAAAATCCG
ATGATATTTGTATGATCAGTTTTTCATGAATAATGTTTCCATAAATATAAGTTTTCTTAA
CTTTTTACCAACAAGTAAATTTTTTTGAAAGGCGGTCTCTTAGGGTCCGGTTCATCAAAA
AAGTTAGAGAAAAGTTGCCTGGTTACCAACAAGTAATTGTGAAATGACTAATAAAAAGCG
AATGATGGAGACGATGCCAATATCGAAGATGATAATCGTATTGTAACAGAGGAATTGTTT
GTCTTAGATGCGATTATATTTACATGCTAGATATTTTATTTTGACAGATGAACCAGACAC
CATCGACTATTGCAACTTGGGGTGTAGGGCTTCCATGTGTGACTACATGGTCAACGCAGG
TAAATAAAATTGATCTGGTATCTGTATTCCTGTAAACTAATTGAAAAGGCTAGTTCTTGA
CACATAATATGCTATATATTTGGGCACCAGCTGCTGACGACGAAGAGATGAAACTCTATG
TGGAACATTGTAGTGATGCTTGTGTCAATTTCTGTAACGGTGATGTTGGCCTCACATCCC
TTACTGCCTAATGATGTGTATCCATGGTCTGAGATTTCAAAGGGCAAGGTTGTATCTCAC
CTTTGCGTTCAATAAAATTGGATCCCATCGAGAGTATCCAAACCAGTGTGTCAACCTGTT
TTATGTGTGTGTATTTCCATTCCTTGTTCGAATAAAAACCATCATGTTGGATGCCATTTT
GCTTCCCTGATGTACTACCATGACTGAGATATAATGGTATATGCAGGCCCTGGGTATATG
TTGTATCATTTGCGTGCGTGTGGATATAAACTCTATGAGTAAATGCTTCAAGTAATATTC
TTTAGTCCTTTTTATTTATTTTAGTCTGTGACACAAGCCCTGAAATGGATCATGTTTTCT
TTTGCATTTTTGCTGAGCAATTCTCTGATCTTTCTTTTTATGACACACAAGGCAAAATAT
TTGCCCGTTTTATTAACTAAGAAGAAGATTTTCCCGTTAATTATGAAAAACTTGGGTAAA
ACCGATACAAAGGTGAAGCCCACTCCCAAACATTGAAACACACTGGGACATGCCCACATT
CGTCGACGGCGGGCTGAACACCATACCAAACGTCAACCATACAAACACACAACAACATGA
AGCTCTACTAGCCAAGTGAGCCAGCCATCCACCACCGTTAAAAAGAAGTCAAGACAACTA
TGGGAGGACCAGACTGAGACTCTCCCGCGGAGGTGAAGAGGCAAGCACCCACAAAGACAT
GCATTGGATACCGTAGATGAAATGTTGACGACTAACTTTGGGGGCAACCTCATTGCCCAC
ACGACTTTGAGATCAATGCACTCGAAGCTGCCAAGCTCTCGGGATCGCCACCCACTCAAC
CGACACAACCTTTCAGGCCCACCACCCAGACACATCACCACTCTCCTCGAATTGCAACAC
CGTACGACCTAGCTGCTTGTAGTCAACCATCCATAGACCACAACCGTCGCACCACATCCA
TGGCCGCTGCCCCGACATACCGTCCATCCGCACGCACGAGGATGCGTGAACCGAGTCCAC
AACCCTACTGCCCATGCAAGTGTTGTGAGAAGATAATAGGTCACTATGATCAAGGGATAT
ATGGGTGCGGATATATGGGAAAAATGATGATCCCCAAATATGTGGGTGGCCTGGGGTTTA
GAGATATCGATATTTTCAACCTGGTGTATTAGCATGTTAAGCATAGGATATTCTGGAGAA
CTCCAAGAGGCTGATTGGTCATATATTAAAAGTAGTGTACTTCCCTGTAATTCTTTTTGG
ATGTTATATAGTGGGACTCGACCATCCTAGATTTGGCGGGCAATTGTGGAAGGTAGGGAT
GTCTTGCAAACTAGCCATTACGCATAACTGAGAATGGCCACACAAACATAGATATGGAAC
CAACACCGGATCCCGAGAGCATAATATTAAGATAAGTGGTTGACCTTTCTGATTACCCAT
CAATTCTGGTCCCGAGAACACGAGCATGACGAAGAGCATTATCTCCTCCATGAGAGCCTG
AACCTGGGTAAAAACCCTTGCCTCTGTTATCATCGTGCCAATCGCCTAGCTAGGATACCC
CATAGAGGGATCTACTGGAGTTGTCGCATGGTGTGTGCCGCAGGGGCTTGCATCCTGCTC
GCAGTTGCGGCCTACTCTGGACCTGCCGGCACACCATTGCTCAGATTGGGCGGTCGGCGG
CGCTGCTCCAGGTGTTGTTCTGGTGACGTGGTAGGCCGTGTGGGAGGCATCAATGTTGCA
CGACGGTGGTTTCTCACGCTCTGACTCGAAGGGCTCAAATCAAGGCAACACCCGATTTGA
CGCTCCGTCTTTGGAGGTGACCTCTTCGGGTTGATGATGGCGTGACTACACTTTTCGCTC
TGCAGGATGACTCTAATGCAGTGATGCGTGTGTTAGTGCATCGCGTGGCAACACGGTGGT
GTTGTTGGTGGGCGTCATCGGTGTGCTTTGGTTGCGGCTACTCAAGCAACATGCTAGAGT
GTTAGTTTGTGACGAGGCAGTGTTAGTTGGCGGCGAGATTGTCCTCCGGTGAACGCACGG
ATGAGTATGGCTACGAGGTGGTTGCTGCATTTTGGCTTCAAGGGTCCTCGTAGTAGTGGT
GGTGTTGACACCTATGCAGGCGGCCCTTCATGGTGTAGTGGAGGCCCCGATGTTTCTTTT
TTTCCTTTTGGTTTGGTTCGCCGTTGTTGATCTTAGTAAGGGCCTGCCCCTACCCTGGGT
CAAAGGTGGCGAGGCATAAGGCTGTTGTCAAAATCCATATTCTTTGATGGGGGTCGTTGC
TGGTGATGTTAGCGCCCGTAGGCGTCCTTCTCCTCTCGGATATATTGTTGAAGATTACCT
TTTCACACTAATTTGCGGCTGGTCGGCATGGAGTGTGGCGTTGGAGGCCGATGGCTAGGC
TTGATATTTTCCAATGTTTGGCGGGGCCGTCGTGCATGTTAGGTGGTGTTGGCATGTTTG
TTTTGGTGTTAGTGTTGGTTCATGTTGGTTTTTGGCCTTGTTTTACTTTTAAACCGATGA
AGCATGTATTTGCCTTTTTTCTCTCTTAATGAAATCGACAAAGCTCCTGCTTTGCTCATA
AAAATGAAAGTCATTTACAATGGTGCGTTTAGTGGATAATGCATGGGATGGAATAAACAA
GACGCGGAACACATTTACGGAGATGCCTACTTAAAAACACCAAACCTGACCGGGAAGTGT
GTAAAGATCAAATTAATAGCTGAAGAGTACCAACATAGGAAAATTAAAACCAGTAGTGTC
GAAGTCAAACTACTAAGTACATCACCGCTGTTGATCTTCAAATTTTCTTCTGCATGTGTC
TACGGAGAGGTGGTACCAATTAGCGGACACATATGCTGTAGACAGTAATCCAATGCTATC
GCATATGTCCGGTTTCATTTTGGAAGAACTCTAACAAAAATTGAACAAATTTGATAAACA
TTTGAACACACCAGACAATATTCATTCATATGTGGATGATTTTACATAAAACCGGAGCAA
ATTCATTGCACTTAGACATATTTCAAATAAACCGGACTCCAAACCTATACTAAAATAACC
ACCAACGCTCGTTCCCCATCTTCGGCGGGCCATGAACCCCGGAAAATAAAGTCCCGCCTC
CTCCTCAGCTATTAAGGACAGTAAAACTAGACCTAAAAGGAGCTCTCTCGTGCACTCACG
ATTTTGGCCGTCGGATTACCAATTTATATCATTTCTGGCTGTCAGATCATTGTTTAAGGC
CGGTTTACCACGATTGGGCAGACTGTCCTGATGGTCAGCTACTCTGGAGACTTTTTTGAA
GGCATTTTTTTCATTGGGCCCAATGGCCCATTATCTAACTTGCAAACTACAGAAAAATCG
ATGCTTCGTTGGCCCATTTATCATCTGCATCTGCGTCGGCTGAGATAAGCCGAGGCGACG
CCAGCGAAGGAACCGGCGATCGAAGGGGTTCAGCGGAGGCCAGCCATAAGCGCTCAAGGA
GCCGATGCGACCCACGCGAGCAACCGACGGTCCAGGGGATCTAGCCACAGCAAGGCGCCC
AAGGGGATCCGGCGCTCTAGCGGCTGCCTCCAGGCTAGTTCGGTGATCCTCCCCTTCTCT
TTCAGGCCCTGAAAAT