Contig Data
morexGenes
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Map Locations of contig_275214 (4807 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_275214

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44705 1 464 bp None Available Available None
MLOC_44706 2 1807 bp None Available Available None
MLOC_44794 7 2169 bp MLOC_44794.2 Available Available LOC_Os01g65200.3, FRAME:-3, EVALUE:0.0, 13101.m14968 protein proton-dependent oligopeptide transport, putative, expressed
MLOC_44707 1 593 bp MLOC_44707.1 Available Available None





CDS Structure of MLOC_44705






CDS Structure of MLOC_44706






CDS Structure of MLOC_44794






CDS Structure of MLOC_44707






Contig Sequence (4807 bp)

>contig_275214 4807 assembly3_WGSMorex_rbca.fasta
GCGCCGGAGGGCGCTGCCTTGGGCCGGTGGTAGCTCCGCCGCCACGGCTCGCATCCGGCA
GCAGCCGTCATGCATCCGTGCTACTGCACGTAGACGCGTAGTAACGTAGCACTACCGCGT
CTCGCAGCCAGCGGCCGCAAGACGCGCTGATGTGCCACATTCAGTCGAGCGCCCCGCGCC
ATGCCGACGACACCACGCCACCACGCGCTGCGTTGAGGGTCTGCGTCACTGGTGTGCCGG
GTCGACGATGCCACCACGCAGGAATCGAGTCTGCGACGAGACTGAAGGCCACGAAGTACT
TGGTATGGATCTTCGAACCATTAGCCGTGGATGCCAACGTCCTTGCTCTTCCTTCTTTTT
TGTTCGTCTTTTCTCTTCTTATGTTTCATTAAAGGATGCGTACATTGCCAAATTTCCTGA
CAACTAAAGATGAAAAACAAGGATCAATTCGTTGTAGTTCTCCATTGCTCAACTTCATAG
AAAAAAAATGTAGTCGATTTCAATGTCCTCTTTGGACTGCAATCAATTCGTTTCTTCTTT
TGTTTTCATCATAGAATCGATGAAGGATTGGAGATTGATGCCCCCTTTGTCCGTTCGCCG
ATTTGGGAGCCGACGAGGTCAAGATGGACGCTGGCGTTGAAGCCGTGCCTCCGTCGAGCC
GGAGGGCGTCGATGTTGCGATAGCCATGTGCCTCGTGGTCGTTCTTTCTCGCTGACGTTC
GCCTGCCTCGTCGCGCCACCGCGGATGGCTACCCTGCCGCAGGCCGGCCGCTTGCGTCGC
CGGTTGGGCTGCAGTACAAAGGCAAGTCGCGTTGTGCTTCTTCGATGCAGAGCGAAAAAT
GCTGATAACGTGTGAAAGAATAAAAGCAAAGAATAAAAGCAAATGACCGAAGAGTCTTTC
TCATTGATTGAAAACTGGGTATATATACCCTTCTTACCAGGCAGTTAGAGTTACAATGTC
GGTAACCACAACCAACGTAAACAACCGACTTACGCATTGATTACTAGGATTAAATTAATC
CTTAACACAACTAACGAGGAGCATAGTTTGGTGTACGTATGCTCTGTGCTGAAGATTAGT
CCAAGCAGACTGACCAGCCGACCTCAGCTCCTTTTGATTTTTAGTCCGTCTCAACATGGG
TAGCCGGTGCCCATTTCTTTCCCTTGATCTATCGGCCATCCAGCCCCGCGAAGGCAACAG
GCGGCGCGGCAAGCAGCCGGCGAAGGCCTCGTGTCAAACCGGCGGAGCATGAGCGAGGCC
ACGGAGATGGCAGCTCGACGGTGGCCAACAGCTTAAGGCGGCAGCAGGGCCAAGGTGTAA
CCACTCACCAAGGACGGCTCGCGGGGGAACGTCCAACTGATGTAAAAGGCCGTGGGCCAA
AGGCCGCGGGGGTTCGGCTCATGCGGCCACGACACAGGGCGAGCGGAGAAAGCGGCTCCA
TGGCGGCACGAGAGGGTGTAGAATCGGACTCAGGGTGGAGATGTGATGCTGCGGTCGGAG
GTGAGCCGGCAGAGCATGTCATGACCAGTGGCAGGGCTGGCGTTAAGGCGAGTGAGTGGA
GGCAAGGTCTGGTGATGGCGGAGTGTGCGGCGGCTTGGGCGCGCTAAGCGGGTTTGGCGC
GGGTATAGGCTCGCACGACGGAGAGGCAGAGCCAGCCTGTTGCAGGTGTGGGATGGCAGG
ATTGGCCTTGCGCAACAGCACGCGGAAGCGGGCAGCGCGACGGCTCAAGATGTAGTGGAG
GCAAGCGGTGCAATGGGGTGGCTCGTGGAACGCGGCGGCGGTCAAAGGGCAATGCCGGTG
GGTCAGCTTGAGGCGAGGCTTGGCAAGGTGAGGCCGTAGATGACGTGGAGTGGCGGGGCA
GAGACATCACAGCAGGGCGGCGGCTCGTTGGTTGAAGACAGGGCGACCCAAAGACAAGGT
CACGGCGACGAGGAAGGCGCCGGTGAGGGCAGCTCGAGGCAAGGCCATTGTGAGTCGTGC
TCGGACATGGCGAGGCAAGTACGGCTAGGAAGCGGGCTCGAGACTGGAGTTTGTCAGGGC
GAGCAGCTGCTCCTTGCGCCCCGAGCACGATCGGATTAGAGGTACAGTCAGCAGGTTGTA
AGGATTAAAATACTATATTTTTGCTGAGTTGGATGATAGAGAAGAGGAGAGAGAAAGGAA
GAGGTCTCTTCGTGAAGAGCTAGCTCCAGCACGTGCTCCTAGATGCTTTTGTGAGAATGA
AATGTGGGGCATATATGATAAAAGTAGTACTCTTTTATAACTAATTATTGTACAAGCTAG
CTATAAGATGGACTATAAGATGGCTTGTAGCCAGCAGTTGGTTATACTATTAACCATGCT
CTTAGGTGGAGCATGCTGCGTTTTGGAAGAATCGAGGTGGATCATGCTAACCATGGACAC
CGAGAAGCATATCGGGGACGTCACCTACTTGTCCCTGATGCGGTATTGCTGGCCACCCGT
GGTGGATGTGGGGAAACCAGATGCGGTGGATGCCGGTTGTCAGTGAATGTCACGGACTAG
GCAGCCAAGTACGCAGCGATGGCAACCGCCAGTGATGGCGGGAGAAACCAGGAGGCGCTC
GAGCATGTTCGTGTGGAGCTGTGTAGGCTTGTGTACTGCCGCCATATGCGTTCCAAGATC
CAGCCGTCGTCGTCCTCGTTGTTTTTGGTCCAATCCCGAGATCTGACCGTGCCCGCGATG
CATGTGTGCGGGAGGAAGGGGATGAAGGCGGCTTGTTATTGATGAACTTGGCTTCGGCCT
TCCCCATTAATAGTAGCATATGGGAACATATAGATATATATTGATGTGACTCGGCATACG
GCTGTAGTAGCAAAAATCCTGTCGATCTCGACGACGCACGATAGCAACAGTAGAAATAGA
TCTCCTGTTGGGTTTCAACAGATCGCATCGCATCTGGGCATGCAGAACGACAAAGCCTAA
TTCAGATTCGACAACTCTCCTACTCTTCTTCATCTGAACAATCGCGAGCTTCTTAATCTA
TGAAGAGCTCCCTTCAAAAACACAACACCATAGTGCTATGCCCCATGTTGGCTGCCAACT
TCGTGTTTTTATCACGGTAGATGTCCTCATGTAAGGACTTAAGTGTGAGGCCATCGCAAC
TATGTGGCGGCTTGAAATGGGTTGGTAGGAATCGAGAGACGTGAGTTTATCCAGGTTCGG
CCCCTCCGAAAGAGGTAAAAGCCTACGCCCTGCTTGTGTTTCAATGACGATCATGATGAG
GATGATCTCGATCACAAGGGTGCGGAATCGCTACCTCTAACCTTGAGGGTGCCTAATTTT
GCTATCTCATGATTTTTCTTCTCTATACCTAATTTACCTTGCCCTCTTAGGGTGCCCTGC
CCCTTGCCCTGCCCCTTCTTACCCTGCCCCTTCTTATATAGGTTGAAGGGGTAGGTTTAC
ATAGAGCCTACTTGGACTAACACTAGTTTCTCTGTCCTAATCTAGGTCTTGCTTCTCTTG
GAGGGAATTCTAACTCTTCTTGGGCCTTCTGTGTGATCCGCTTTTACGCCGGCTTGCACA
CTAGGCCTTGGGTCATTCCATCCCGATTGACCTGGTGAACATGGCACCTTGCATCAGTCG
TCAAATGATGGGCGGGTCATCTCCTGGCTGGGTCAAACTGTGAGTAATATCCCCGACGGG
AGTGGTACGACATATTGAACGAATTCCTCATGAAGAAAGGCTTCAAACCCGGTTCACCCA
AACCAACTCTTTTCACAAAATATTATGACAATGAACAATTTGTGTGGCAAATATATGTGG
GCGATATCATCTCTAGTTGTACTAACAAACATTATGTTGATAAATTTGCCTACATGATGG
GTGAAGAATATCAAATGCCCATGATGGGGGAGCTCAAATTCTTCCTAGGACTACAAACTC
ATCAACAACGTAACGACATCTTCATTTCTTTAGAGAAGTACCTCAAGGATGTCCTGAAGA
AATCCAGCGTGCATGAATGCAAAGGCGTCAAAATTCCCGTGCCTACCAATGGCCACCTCT
GCACTAACAAAAATGGTAAAGATTTCTATCAGCTTGTGTATCGCTCTATGATTGGCTTAG
TGTTTGCATGTGTGCCCGTTTCCAAGCAACACCGATGGAATCGCACTATAAGGTTGTGAA
GCATATTCTTTGATATCTAGCTCACACACCAATTCTTGGATTATGGTATCCCAAGGGCTC
AAATCTTCATCTCGTTAGATATTCTAACTCTTACTATGTTGGTGACCGTGTGGCTTGCAA
GTCAACATCAGGCACCTGCCATTTCCTCGGACGATCCTTAGTCTTTTGGTACTCAAAGAA
GCAGAACTGCATGTCACTTTCTACTGTTTAAGCTTAGTACATTATTGCTGGTTCATGTTG
TGCTCAACTGCTATGGATGAAGCAACCCTCAAGGACTACGACATCAACATGAAGAATGTG
CCACTCTACTGTGGCAATGGTAGTGCAATCAAGATTACATACAACCCAGTGCAACACTCG
AAGANNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTTCATGATCATGTACTCAAGAACAAC
ATCATCATCGACCATGTGAAGACTGAAGGACAACTAGAAGATATCCTCACTAAGCCCTTT
GATGAAAAGAGATTTTGCAAATTGCGGTGTGAGCTAAGTATCCTAGAATCTTCAGATGTT
GTTTGAAAGGACACACATCCTAACACTTATGCAAAATTGATGACTTACACTACAGGAATC
ACCTTTTTTGTCGTCTGCCGCCACAGACGGCAAAGACAGTATCCCTGACGGCAAAGACAA
TACCACA