Contig Data
morexGenes
Links



Map Locations of contig_275196 (2354 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_275196

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44696 2 1710 bp MLOC_44696.1 Available Available LOC_Os06g37160.1, FRAME:-2, EVALUE:1e-20, 13106.m03848 protein transmembrane 9 superfamily member, putative, expressed





CDS Structure of MLOC_44696






Contig Sequence (2354 bp)

>contig_275196 2354 assembly3_WGSMorex_rbca.fasta
ATCGACAAAGACTTAGCCATGGACAGGGGTGCGTGGAAGTTAGCTATGCACGTTCCAGAG
CCATGACTTGACTTCGAGATTTTATGGGTTTCAACTCTAGCCTACCTCAACTTGTTTGGG
ACTGAAAGACTTGATTGTTGTTGTTGTAATTGTCATGCTTAAAAATCTGACGCAAGCTCT
TGTTCATCGGTAATTTTAACAGAGTATGTTGGGTATATGACTTCACCCAATTCCATATGG
TAAAACTATTTTTACTTCTTCTAAAAAAAACTATTTTCACTAGCTGTAGCTTATGTAATT
TGTGCTCCGGCTAGTTGATCGGTACGTAAGCTCTAGTTCATCCCCTAGACAACCAGAGTA
CTACCAGCTGGAGGGTATGCTGACGCTGAGTCACCAGCTGGAGGGTATGCCGCACTACGT
GGCAGTGACACCGCGCCACGCGTCCTCCCACGCGTTCAGGTGGCCGCTTAACGTGGCCAC
TTAAGGCCCCTCTCGTCCTTCTCTCCGAGGGCACATCTCGGCAGTGGCAAACCAGTAAAC
GAGAAAGCTTGGCCGCAGTTGGCAGCTAGAGCAGCGAGAAGAGGAGGAGAGCGTCGTCGA
CCATGTGGCCGGAGATGAAGGCGTGGGCCTCCATGGCCGACGACCCGCTGAAGCGTGCGT
CGTCGTCGGCGACGAGCCCGTCCAGCCCCATGCGCCGCGTCAGCCCCACCACCATGGCGG
TCGGCGGCCTCCTCGCCGTCGGCACCGTCGGCTACTTCATGCTCATGGGCAAGGACGACA
GGCACAACGAGCGCCTGGCTCACCGCACCTGACGAGCCGTCGTCGTCGTCGCCGGAGTCC
TTTGCCGTAGCTTACCGGTAACCGCGGCATAGTAATAATAAAACCCCCCTCCCTCCTGCT
GCGTACGGTGTGTAAATCGTGTGTGTGCTCTGTTTCTGTACTCTTTTTATCAGTGGAACA
TGGAGAGATTTTACCGGGCATGGTCTCTTCTTGGTTGATTTTCTGAACTTTAGTACCGAA
CGAATGCAGAGAGTTGTATGTCCTTTACTGTAAGGAAGGATACACGCATCTACTGAATCA
TCAAACTGTAGGATCGCTCAAGATAACGCCTGAAGAAACAGATCCTGCTTGCCTGCTACT
ACTCTGTTCATCTGTAAACCAACCATGACATGCTAGTTGCCTAGTTCAGAAGTTCGTATA
TTCGATTTTGATTTGGACGGAGGAGTAGATGAGCCTGGTGAAGCAGAAGCAGGCGCAGAA
GCCGACGAAGATGTAGGAGGCGATGAGCATGTACCCGAAGTAGAGCGCGCCGGAGACCAC
CTTGGTCAATGGTCATATCCAGCTTGGTGAAGAAGTAGAAGGTGGCGTAGAGGAAGAGGT
AGAGCGCCGACGAGCCTGCCGTCAGGTACGACCTCCACCACCACCGGTAGCCCTCGCCGC
ACAGCTGGAAGTAGCAGAGCACCCCAAGATGTAGTACAACTGGTGCAGCCGGACGGAGGT
GAGGATGAAGAAGATCGACACCAATCAATCCATTAGTGAACTGTGTGCCCGACCTCTGAA
CTTTCCTGCATTTGACCTTGCAAGAACCTGTCTCACATGTTGATTCGTTAGTCGTCGTCG
ATCTTCTCGACGACGTTGGCTCCCTCCTGGATGAGCACGATCCTGCAGACGATCTGACAC
AGGATGGGCTTCCTCTTCTCGAACTGCAAACCCAGTCACAGATTCACACAATTCCAATAG
AAATGTTGGGAGTGTAACATGTTCAGAAAGTAGTAGTAAGTGAGTACTGAGCACCTCCCC
CCGATGGCGGCGGGGCGGCAGAAGGGCAACCAGTAGTAGGAGCAGGACAGCTGAGTCCCG
ATGGAGCTCAGCTGCTGGCTCACCTTGACGGCCAGAATTTTTGTTTAAAAGGACCCCTAG
CCGAGTCAGTTTGTCCCCAATTTGTCGGAAAGGACCACGGAAAGACCCTCACCCACCGTG
ACGGCAGGCGAGGTGGCTGGGGCGTGCCGCCACGGCGCGAGGCGGCCAGCCTGGCATTCC
CGTTTCGCGCGGCTGAACGGTGACGAGGCGCGGACGGAACAGTGACGAGGTGGTGGGACC
TGCCTCCACGGCAGGAGGCGAGGTGGCGCCAGGCGACGCGTGTCACCTGCCGCCACCAGG
CGAGGCGGCTGGGGCTTGCCTGGCATTTCCTTTTCAGCCGTGATAGAACGGTGACGAGGT
GGTGGGACCTGCCTCCACGAAGATCTATCTGATGTAATCCTCTTTGACGGTGTGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTATGAATTATATTAGAGTCTTTG
TTGATTTCTTATAT