Contig Data
morexGenes
Links



Map Locations of contig_275185 (3390 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_275185

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44690 1 977 bp MLOC_44690.1 Available Available LOC_Os02g44820.3, FRAME:-2, EVALUE:9e-108, 13102.m05019 protein rho-GTPase-activating protein-related, putative, expressed





CDS Structure of MLOC_44690






Contig Sequence (3390 bp)

>contig_275185 3390 assembly3_WGSMorex_rbca.fasta
CACATGTAAATGAGTCTTCATTTAGTACAATTATAGCATGGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCTCTAGGACATAATTCCAACAAA
TTAATGATAGCATATGCATAAGAGCATTATTTTTATCTTGCAGATATATGTGTTTGCATT
TGTAATCTAAGGCAAGTCTTAATTTGATTGCAAACATATTAGGCAGCTCCATCGAAAATA
ATCAATTTGTAAGTACATGTATACCAAATGTTCATGGTTGCATATCAACATCAATACTTT
TAAAAATATATTAGCAAAACAGTTTATATATATGAAAAATCGGAGCTAAGCCATTTGTTT
ACATAAAGCATGTATAAACAACATTGCATACTTTTTATACATTAGATACATTTTTTTTAC
GTGTGAAATCAGAAACTTTATTTAGTTTTGATGTCTAATTTTCTAATACACATTTTACAT
ATTTTGTATGCATCATGAACGTTTTTATATACATGTTTTACATTATCCAAATACACGATT
AACATTTTTGAAAAATTCTATTTTTATGTCTACTTTGTTCCATACACATTATATATTTTT
GTATATGTTTTCTTATACAGTGGAAACTTTTTTTATGCACATTTAAAGTTTTTTAAATAC
ATGATCAATATTTTTCAAAATATAACAAAAATATATTATTTATTATCCAAACACACTCTA
TATATTTTTTATATATGGAAACTTTTCTATCTACAAAGCTGACATTTCTTTAAAAAATGT
AGAAGAAGTGCAAAAATAAGAAAAAAAGGGTTATAGGCCGCCCAGGGATCAAACCTGGGT
CTCCTAGGTGGGAGGACCACGAACAAACCGTCTGGGCTAGCCTCACGCTTGAGGTCAAAT
AAAAGAACCGGTTTCTTTAGAATTAGAAAGAAGAACCGAATCAAAGTTAAAAAAGAATCG
TTTTTGTCACTTATGGGTGGCATTGGTTTGTAATTTTGGTCAGCTTTAGGGATAAATTTA
ATGGCGTATGGCAGAAGCGATCCTTTGCTTTATTAGTAGGTAAGATAAAATAGATATAAA
TATAGATATGGTTGTGTGACCAACTTACCATGGTCGTACCAAGCTTTTACAATTCCTGCC
TTGTTTCTTATATCTTCATTTTTAAAGAACAATGCTCTTAGAACATGTACAATAATAATA
TATGGATACAGATATCTTACGACAAAAAATAATTTAAATTATTTATATTGATTTTCTATT
TCCAATGCAAGCTATCATCAGTGCGCCTTATCAAAGAATAAAAAATAAAGATTAATACAC
ATGCATCTTTAAAATGATAATATGCATTACAGATGTAGTATCATATACATGACATTTTTT
CCGTCACAGTTTAGAAAGCATACATGTGTACCTAGATCGTCAATTTAACTTATATAAAAT
ATATTGTTTAACATAAAAAATATATAATTAAAAAATAAAACATCTAAATTTTTTAATGAT
ATATTTTTTGTTAAATATGCGTCTCATTAAGTTGATCAAATTAACGATCTAGATACATGT
GTCAGACTTGTAAACTAAGAGAGAGGGAGATACTCCCCATTACAACCAGTCTTAGTTGCA
GAAAGCAATATCCGGGCCGCAAATTATTTTGAATTATCGGACTCTTTATTGTATTTTACA
GTATTACTTCCACTATTACTAATATGTACAGATTACAAACAAACATCAAGAGGCCTGCTA
ATCTACAACCGGACGCAGCTGGGGGCTATCACTTGGTGCCGGACGCTAGGAGCACCGCAG
CGAGCGTAGGGACGCCGGTGTGTCCATGGACGCGGCGTCGAACACGGAACAGCGGTCGGC
GGCCTCGATTCCGTAGTCCATGAGCGGGCGGCGCTCGAGCTCGTCGTCGTGCTGGCGTGC
GCACTCCGGGACCTCGAGCTCCCCCTTGTCCATGTGCGCCCACAGGTACTCGAGCCTGCT
CATGTACCTCAGCTTCTCGTACAACCTGCAAGTCAAGATTTAATTTCCAGTTCCAGCGAA
CAGCACCAGTGCCAAACACTGAACCGGGTCATGGCTGATCAGCCGCGTTACACACATACC
CGGAGCTGAAGAGGAACCGGCCGAAGGTCGCGAAGAAGAGCCGGGCCTGGATGCCGGGGT
GCACGAAGTAGACGGCGCGCAGCCTCTCCTTGGCCACGGCCGGCAGGCACTCGTACGCCG
CGCGGATGGCGCCCAGGCCCGGGAAGTTGTCGCCGCGGTCGACGAGGGAGTGCATGTACA
CGACCACGAACTCCCGCTCCCCGACCTCCGGGAGCACCCGCTTCCGCAGGTGCGCCTTCA
GCGCCTCCTCCGCCAGCCCGCCCAGCGCGCGCGCTGCGTCACGCAGAGACGGAAACCCTG
TCAGTCACCTTTCGCGCGAACATGTTCGATAGGAGACCAGGCCGCTACGGGCTAACCAAA
TCTTACCGGGGAAGTACTTGCCGACGATCCTGACGACGGCGCGGCCCGCTTTGTCGCCCC
CATGCACGGTGATCGCCCGGCTGCGCTCCAGCAGCAGCTCCGGCTCCGTCGTGACGTCAA
CGGTACCCGCCATGATGTTTGATGTGTGTTTGTGCGTGCGCGCGCCTAACTGCAGAGCTC
GGAGCAGAGAGGTGAGCCTTTTAAATGGCGATCCGATGCGAGTGGGCTGACGCAGGACGG
TGGTATGGCGCGGCGCGTGGGGCTGCGGTGGGCTGGTTTCCTGGGCCGTTGGGGGATGGG
CGTGAGCGGTGGACGAGGCGATGCGGGATCCCGGCAGCATATGCGGGGAATATTTTAGTT
GGCGGATGGAGTGGAGTGGATTGGCGCCGCCTTGGGAGTTCCACGCGTTTGTGTGTGCCG
GTCTGCGCCTCGTGATCAAGTTAAGGAATCGTGATCAAATTCATCTGCTTTGCATTTGTC
GGAGTAAGGGCGACCCTAAATGAACGTCCGGTTTGATCGAATTTTATTCGTTTGAAGCCA
TAATGAATTTGTTCATGTCCGTCTTTGTTCGTTGGGTCGTGCATGCGTCTACCGTGCGGC
CGTACCTTAAATCATGTCCGTGTTGGACGTAATTAAAAAAATAACAGAACTTAAATAAAA
AGTAAATAAACATAGTTAAAAAAACTTAAAACATAAAATTAAGGGTCACGACCACAAAAC
GGTCCAGTTTTAACGTAGTTGACATAATTAACATGAAAAAAACGCCCGTCGATGCCGTGG
CCGTCGTCGTCGCTGACGAGGTCGACGTAGACCGACGGCATCTAGAGGTGGGCGAGCGGT
CCGTGGTGCGCGGGGGCGGGCTGGAAGCTGGCAGGTGACTGCAGCACCTCCTTCCGTGGC
GAGCCGTCCCGCTCCGGTGACCGCGGCGGC