Contig Data
morexGenes
Links



Map Locations of contig_275145 (5263 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_275145

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44676 1 1087 bp MLOC_44676.1 Available Available LOC_Os01g55830.1, FRAME:+1, EVALUE:8e-120, 13101.m05891 protein glutathione S-transferase, putative, expressed





CDS Structure of MLOC_44676






Contig Sequence (5263 bp)

>contig_275145 5263 assembly3_WGSMorex_rbca.fasta
CGAAGGTGGCATGGTGGAGAGAGTGCAGCGCGAGCGCTCGAGTGTGCGGCGCACGGTAGT
GGACGCACCAAATACACGGCGCGCGATGGCGATTCGGACAGCACGTTGTACTCTATATGT
CGTGCACGCGTTTATCGCTCGTCCGCTGAAGCCCATTTTGCTATTTTGCGCGCGCTAAAA
AAGTTAATTTTACAGCGCGGCGTTGTTTTAGCGCGGCTGTTGGAGACGCTCTAATACCTC
GAAGAAGCTTATAAAGATAGGCGTGCGTGTGTATTTTCATAATTGTATGTGATCATCTTC
GTTTGAACGCGCCTCTCAAAGGAAAAAAAATGATTGTACGTGTCCAAAAAAGAAAAAAGA
ACGCGCATCTAGAAAATAAACATATGTAAAAACAAGGAAGTAAACGAAGCAGAGATTGTT
CGAAATAAATTTAAATTTCAGCCCCTTGGAAGCGGAGTACTGCATTGCGAGTACTAGAGG
CCTAATTGCTACAGTAACGAAGCTTCATCCGAAGAAGCTAAAGTCAATCAATCATCAAAA
CTAAAAGTGCTGGAGAAAGGAAATGCGCGGATCTCGATGCGCCGCTGGCGCACTACCCAC
CGTGATCACTTGCGTCGGTCGCCAATCCGAAAAGAATATCTATATAGGAGTATATCAGAA
AAACAGAATAGAGTGGAGCACTAGAAAAAGCTCGTGCAAAAACAAGGACGAGTAGTAGTA
CTACTCGAAATGGTTGAAGAAACGGAAGCCCCTAGAAGCGCGGGGCCCATTGACCAGCCG
CACCCTCCACCACACCTCACCTACCCGCTCCCTCTCCCACTCCACCTGCTCCATCGGAAG
GGAGCAGCAGTGAGGCTCCATTGCCTATTTAGCCGAGACCCCGAGCGCGGTCATTTCCCC
ATCCCGTCCCGTCCCATCCCATCCCATCCGAGAAGAAGAGATAGAAAAAAAAAGGTTCGA
GGGCGTTGCGGAGTGAGAAGAGACGAGATGGCTCCGGTGAAGCTGTACGGCGCGACCCTG
TCGTGGAACGTCACCAGGTGCGTGGCGGCGCTGGAGGAGGCCGGCGTCGAGTACGAGCTC
GTCCCCATCAACTTCAGCACCGGCGAGCACAAGAGCCCCGACCACCTCGCCAGGAACGTA
CGTGCCCTACCATGCCCTCCCCCCCTCTTGAATTTACCATCCGTGTCGATAGTTCGGCGG
CCCTGCGCCGTCTGCTTGCCTCTAATCTCACGAGATGATGACGTCGATTCGTTCGGTCCG
TCGCTGCCATCGGCGGAGCAAAAAGTCAGCCGACTCCCGCCGTGGGGGGTCGCTTCCATG
TCTCCATCACTGTTTATTTTAGCGGGGGCCGGAGAGATGTCGCTGTCGCTCTCGTATAAT
CTAGCAGTACTGGTATCACGATTGAGACCATGGTCCGATGGGGCGTTTACAGGTCGATGT
TGGAGCAGATCCTAGGTTCAGATTGTACTTCGATGAGGACGATACAGGGCGAGTTTTTCC
GCAGCTGGTCTCAGATTGGCGAACCATTTGGGCGTGGACCGCGTGGTGGACTAGATTAAC
TAACACCTCCGGCTCCGCTGCTCCCCAATCTTTTAGTCACTTGAATTTCGCCAACTTACA
CTGTAGGAAATTTATATTTTCACCACATCCACGTTCCTGCTCCGACGACCCACGCCACTG
GTATGCCAAGTGTGTTATTTACATCTTCTCTTAAACCTTGTAAATGTAAATATTTTTGAT
TCATTATGGAAACTTGATCTGGATGTGCCATTTAGTTTGCTTGTTCATTGGTGCTTTGAC
AAGTTAATTTTGGAACAAATTGCAAGCTCAAGGAGGAATACAGTCAGCAAATCCCACGCC
CTTCCTGCACCCAAGCACCGACAACGCCACCAACCACCCAGTTATATTACAATTGTGTCA
CTTTTTGCCAATAGATCTCCCCCCTAAACCTTGTACTAAAAACAAAATGATTTGGGTAAA
ATGTAAAAACTTGATCTAGATTGCCCTTTAATCATCTGCTAGTTCGATTAGAGATTTTAT
TTTGTAGGTCTTATAGGTTAGTCATCCCTATTCTTTGACTTGTTCCTTATTAATACACCA
CATACATCCATCAGATTTGCTTGGTGACAGGGAAGGTGTGGTAATAATAGGGTGGGTGTT
AAGGTTTGCAAGAAGCATGCTCCTTTCCAGTATGGGCATTCCCTGTGTACCTCACGGAAT
AAACGATCATTGGTTCAGCAAACTATCTTACAACATTAACCCAGGAGTCCCAAGCAACCT
GTGGATGCTCAGAAAGTTGACAGAAAAACGTAAATCAAAACAAAATGTAGCCTGCATTCA
GTACCACCTATTACGTCCTGTCGCATTTTTTTGTTGCACAGCCACTACAGCAGCATCTCA
TGGAGACACTGCAAAAAACATGCATAAGTAGTACTCCCTCTGTACCTAAATANNNGTAGT
TGGGGAGAACTAGACTAGTCCCTCCTTAAGTTCTCCTCAACTATAATTATTTAGGTACGG
AGGGAGTATTTTGTTTGACCACCTAATCTTAGTGTGATAGTAATCGTGACATGTGGTTTC
TGTTTTTAGAGATTTGACATATGATAAAACTGACTGTCTTCATGTTGTTCTCTGCAGCCC
TTTGGGCAGGTGCCAGCTTTGCAGGATGGTGACTTGTATGTCTTCGGTATGATCCTATGT
CTCGAGACGTTCTCTCTTTTCTACCCCTCATAAACAGAGCTATAAAGGGTCATGATGCTT
TTACATTATTGTTGTTGTGGTTTGTTTTGCTGTTAATGTTGTTGCCTTGTAGTATAACAA
AGGTAGCATTTCCATGAGCCTTTACTAAAAACAAAGGAACAGATTCATTTGGACTGATGA
TAAACCTTTAAAGGTGTTCTTCACAAATCAGTATGTGATGACATGAGTAAGAAAACAACG
TTGCCTAATTGTTAGCTGCCGCCTGGCATTATAATTAGGAGTTATACCTTTTTGGAGTTT
TCATCAACTACCATCGAATGCTTTAGTTCAGAATGATGAGGTAATAATTATAGTTACCAA
CCACAAGATTGGTCGGAAGACAAAAACATGAGTTATGGTAAGGTTTCCCAAGCAATCATA
TAGTCTATGCTTACGAGTTCTCATTTGAAATCTAATCAAGTTTAGAAATGATCATTTTAC
TAGTTTTAGACCTATTTATTGAAATGGGATAAAACAGTACCATACTCCCTTTAGAATCCT
CATAACTCTGGTTCTATTTTCTTTTTCTCTTTGTATTAGAATCACGTGCTATTTGCAAGT
ATGCGTGCCGCAAGAACAAGCCAGAGCTGTTGAAGGAGGGCGACATCAAGGAGTCAGCAA
TGGTGGATGTGTGGCTCGAGGTGGAGGCCCATCAGTACACCGCCGCTCTGAGCCCCATTC
TCTTCGAGTGCCTTATCCATCCTATGCTTGGGGGAGCCACTGACCAGAAGGTCATCGACG
ACAACCTTGTTAAGATCAAGAACGTGCTGGCGGTGTACGAGGCGCGGCTCACCAAGTCCA
AGTACCTGGCTGGAGACTTCCTCAGCCTTGCGGACCTTAACCATGCGTCTGTCACCCTGT
GCTTGGCGGCCACACCCTATGCATCTCTGTTTGACGCTTACCCGCATGTGAAGGCCTGGT
GGACTGACCTGCTGACGAGGCCGTCCGTCCAGAAGGTCGCTGCGCTGATGAAGCCATGAT
CTTAGTTTCTGGGGCTTGTTCGTCGAAATAAGCCGAGGTGTGTCACCCCCGATGTGTGCC
TTTCCTAGTGTGTGTTCTTGTGATGTGTCCTGGTGTTGAATGTTCAGGCTTGTGCTTGCG
ATCCTGTCGAATCTTGTACTTAAATGAGCATTCCCGTGCTCTGGTTTGATAATAAATTGT
GCCCAGATATTGTCTCAGCCTCAATATTTTCTCATCTGTTGCTTTGATGATATGTCCATT
AGCCATTTATTAGCTGCCTGTGTATCTTGATTCTATTTTTTTGAGAATCACTTCTTTTTA
GAATCGTGATTATTTTCTGAGAATCTATGTATCCTACTTGGATGTAAGAAGGGATCTGCT
TTGGAAGAAGCAGCGAAAATCTGAAGGCGATCCATAAGATTGGGAACCTGTTCGTGCCAT
TTGATCCTCCTATGTTGAATTGTTTCAACGGTCAAAGAGCACCATATGATTCTCATATAT
TTGACAGTGTGCATCCGTACCTAGGGTTTTCACCCCGGGACTCGAGACAAACCACCAAAT
AGAAATCAGGATGTGTTGTGGCCACCATTTCCCACGACCCCGGCAGCTACATATGCGTAG
CATGATTTTACGTGAGACACCACACAAATGAAGACCGTGCGTGATTGTCGCCACGAGAGG
CTCGAAACGTCAAGGGTCGACGTCACACAAACGACGAAGGTGTGCGACGAAGATTGGTGA
GGGAGGAAGGTCACCGGCACCGCTAAGATCCCAATTCGGGACACTTCATCAGTACGACAC
ACACCCCGAAGGTTATTTTATGCACAGTCGCATATAATTCAATCATAAATATGTTTTTTT
TTACCTCTGCATCACTCGCAAAGATGTCGGTCGCATCCTTGAGCCCGAGATGTGTCATGT
CGAGATGTTCGTCGGCCATCCGAAGAGCATCCCGCTTCTTGGATGTGAAGACTCGGTTGT
TCCACGAGGCCTTCTTGCCCCAATAGTGCAACACGCACTCATACTCGAAAGAAGTCAACG
ACATCTCCGAGAACTCCTCCTAGTCATATCTTGTGTATTGGTCCGAGCAGTTGGTTGTGG
GGAAGGAACGAGCCTAGATGTCGCTTCTACCATGAGGGACATGTGCACATCAATACATCA
TCCTCAACAACCGAAGGAGACCCGCAGATGGATTAGGGCTTGATATATGACGTGTTTTTT
CAACAAGGATCCATCCTTAAGGCGAAATGCAAGTAAAATGCTTACTAAATAGGTACATGA
TGATTTCGCGACACCCGCTCTTCTGGATTTTCTCATCTTTCAAGGATCAGTTGGGGGGGG
GGGGCTCTAGAGTCTAGAGCATGCTGGCCTAAGATGGATCCGCCTGATGTGAAGACCCCA
TGCGCTTTCTCGAGCGACCTTCCATGGATGAAGGGATTGTTGAAGTGTATATATGGATTG
CCAAACCCCTTCCGTTAGTTCAAACTTTTGATTGCGTTGGCTAGTTGCTGCTGGCTACGC
CTATAGGGATTTCCTTGGCAAATATGCTCGTATAACTTCGTAT