Map Locations of contig_275080 (3230 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_275080

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44640 4 1833 bp AK356508 Available Available None





CDS Structure of MLOC_44640






Contig Sequence (3230 bp)

>contig_275080 3230 assembly3_WGSMorex_rbca.fasta
GTTGCGGTCACGATGAGCATCATCGCGAAGAAACTGATCTTCATCCGGTTACTACATGCA
ACCCGCGTCAACGTCGGAGACTCACCCAAATTAAGTTGTTCCATTGCAATGATGCACTTT
AAACGATGACCATCATCTCTCCGCCGCATCGACCGCCTCCCATTTCCCGGTGATCACCAC
CTCCCTCCACCACATACACTACAGGTTAAATGAAATCAGGCAGGCCACTCGATTGATTTT
GCGGCTAAAGAACACGCAAAAACCGACTAAATCCTGCTACAGTACCTACCTCCCGTTCGT
CCCAGGAATGAGTTCCCCCTTCAGGATCTTGATTGGGCGTGTTGATTTGCACGCCCGTAG
CCTGCACTCCAACAACGAACCATTAGTCCAAACCATAGCCCTGTTGTTTAACTGCTTGTG
GTTGCACTTCGGTGGTGAGGGAGATATGTACATACCTGTTCGATCTCATTTATGGTCCTC
CCGCCACAGCCGATGACAGTGCCCACGTACTCGTCCAAGACGCCCATGGTGAGGGTCCCT
TGCACGTCGCTGTCGTAGTCACGCGATCTCACTGGTGTGTCAGGCTGGAATTCAAGGAGA
AGACGGTTCAGGCTTCGCGATGTAGGCCTATTTGGTAAATGGGCATGAACAACAGACAGT
TTGCATTATATGGAAAAATATCGAAATGTTTTCTGTTCCCTGAATAATGATGGTAATATG
AAGCAAATAGGGGTCAAACCCACGGTTTCATTTTAACAATATGCCTTTTGTATTAGGGTG
TTTTTTTGGTCCTTAGATAAATAAAATCTCCCATATTTCTTCTCTGCAAATATAATTTCA
GCCAGAACATGCTTTATATTTTCTGAAGCACAAAATACGCTAGTGACAGTAGGAGTGAAC
CTACCATATTTTACATGACTATATAAGAATCTTAATTTTCTGCATAGAAATGATGTCTTT
TTTTCCATTTGACATTCATTAGCTCCGCAACAAGCATTACGGCAGAATAAGAGAAATAGA
GAACATAACCTTCTTTCTTTTGTCACACTCTCCTAAACTCCCTTTGCTTTCTATTTAAAT
TTGAAACCCTTGTTATTGTTAACAAGACATGTACCCAGAAAGAAGCTCCATTAAACAGAC
TAACTATGCATGAAGAGAAAAATTCAAATCCAGGTTAAGAGGATATCAGATCACAAATTG
TACAGTTATACTTCAATTCAGCAACAATGTCTTACACTGCTGTGGTAACTTTCGACATGC
TCATCTTGCACAGCACCGCCACGCCGAATACTTGAACTTGGAAAACTAAAGCCTGTGTAT
TTGAGAAATGCGATTAGCCAAATAGTTACTGCAAAAGGTGATGCGATAAGAGCTAGTAGG
TGGCACCACAATGCAAGCAAATTGTAATGCTAATTGATCACGTCCGTACATAAATATAAC
AGAAACGATTAGGAACCGACATATATCTCAGGTTCGACCTTACTGCTTGGTTGTGAGCTT
GTGATAGATACCCCACTAAACCAAAATCCCTCAAGGCAGACAAGATGCAACAAATTGGGT
CGAAGGCAATAGATAAAACGACAAAAAAATAAAAAACCAGTACTAAACGGAAGTGATACA
CACATACATGCGGTGGAGGATGAGTAGCGGACGTCGTCAAGCAACTCGGATACTATAAGA
AATATAGCCTGCAACTGATTGTCCAAGTGTCCAGTGATCGTAACCAGTCTATCGTGGAAA
CCGTAGCAGATGGCGTAGGGTGAGACCATGATTCTAGTATTTGACTCCTCGGCGAAGGAC
CTGGATGATGAACAAAGAGAGAAACATTTGGAATATCTGAAAAGTAGAACTAAAGAAGAA
GAAATATGTTGACGGGTACTAGTGAAGGGCAGGCGCCCAAATAGTAAACGCAAGCTAATA
TTCCGAATAGTAAATGGAAGCTAAAACTGCCTACGGTCCCAAATCTTAACAGTGCAGCTG
AAGAAGCAGAGCTGACGCTGGAATGCCCAGCACACCTCTGTTCACGTGCGATGACATACA
CAAACATGGCTTAAATACAAAAAATTTAGCAAGAGCGGCAGCACTGTTGGAACAGATACA
GATAAAAGGGTCGCTTGCATTGCATTTCAGCAATGCCAACAGGCGTATTTTTTCGTGACG
ATTCCAAACAAGGGTCCGAAATATGCAGTTCCACAGCGGCCGATCAGATGCACTAGGTAG
ATGCAGAGATGATGGAACAGGTAGTAATGTGCTGCAAACTTTTATAAACTATCCCTCTGA
ATGAACAAAACTCATGATCACATTTCAGCACCGGCACCAGAGAAAAGCTCGCCAAACATG
CAACTGCGTTGCGTTGCCGTAAATCAAACATGCGTGTAGGTAGATAAAGAGCAAAGGGGG
TCACTTGCATTGCACGCTCCCTTGGGCCTTTTGTTGAGTGGAGAGCATATACCATACAGT
TCATTTGAAGCACATCAATATTGGGCATGAGAACAGGAAGGGAATGTAAGTTGTAGGAGT
CGTCGGGCACCACGAGCACCACGGTAGCATCAGCATCAATCACCTGGTCACCCTGCCAGC
AGAGCAGAAGCAGAGGATCAGTCCATCAATCAATAGGAGAAGATGAAACTGCTCTGAACA
TAAGGACGGGTGATGAGCTGCAGGAACCAATTCAGTCAGCAAAGTGTAACTGTGAACAAA
TGTTTTACAGAGAGGCAGAGGGTGAGGGCCCTGAATCTGGAAGTTTTGCTGACGGCTTTA
GCATACCAGGTAGAAGAGCTTCTGGAGGACGAGGTCTGCGGCGTCCATGACGGCGGGGAA
GAGGCCGGAGACGAAGACGACCCTGCGGTCCGTGGCGGGGAGGGGGCGGCCTCCGGCGGA
GATCTTGATGTTGGCCCCGGAGCCGGCGTCCATGGCGTGGACAGCGGAGCCGGCCCTGCC
GTAGATGCAGCCCGCGTCGGCGTCCGAGACGAGGATCCTAGCGTGCGTCGGCCTCTCCCA
CATGACATCTGCGGCATGGACAGACGGAGATTGAAACTAATTTGAATTCAAACCCTCGCA
AAAACCCTCGCCTCGAGCACGGAGCAGAGGAATGCGAGATCGGCATCGGGTTGCGCGCAC
GCGCGGCTGCTTCTGTTGCTCCTGTCGTCGGCGGGAGGGGAGAAGGGGGTCGTCGGAGCG
GGGGGGCGCGCGGTGCGGCCCTGATGGCGTGTCGGCTCGGTGGCCTTGTT