Contig Data
morexGenes
Links



Map Locations of contig_275062 (3243 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_275062

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44630 2 2078 bp MLOC_44630.1 Available Available LOC_Os07g38130.1, FRAME:+1, EVALUE:3e-171, 13107.m03937 protein polygalacturonase inhibitor 1 precursor, putative, expressed





CDS Structure of MLOC_44630






Contig Sequence (3243 bp)

>contig_275062 3243 assembly3_WGSMorex_rbca.fasta
AACACACACGATTAGTCCTTTGCGATACTGTCATCAATCACCTAAATTACATAGGCATAA
AATATGTCTAACATACACAATTCCTTCCCGCGCGATAACTGTTTCTTGATTAAAAAAGCT
ATAATTATTCTCTTGTAAATAATATAATAATTGTTGGACGCGGCGTTTCAGCCCCGGGCT
CAAATAAGTCGGGACGTGAACAGTACAACGGTTTGGGTATAAAAAATATTCAAAAAAAGT
CAATTTTTTTGTAGTGTAAGATGCTCCTATGTGTGAACTCTGTGCAAAAATTTGTAGAGT
TTGGACATTCGAGGAGCTTACGGCAAAAAAGACAGATTACAGTGAGAAATTTTTGAAAAT
CCCACTATTCATGCTTGATTTTGTTTTTTTTTTGCCTCGAGCTCCTCGAATGTTTAAGCT
TCATAAATTTTTTACAGGGATTTCACGCATAGAAGCATCTTGCACTAAAAAAAATTGATT
TTTTAATTAGATTTTTATAGGTCAAACAGCCGTACTGTTCACCTGTTTCATATGAGTCGG
GCTTAGAGATGGATTATCGAATAATTGTTCTCTTATATTATTGAGTGAAGAAACAAACAG
TGGCACTGGCTAGGCGACGCCGGTCTTGGTTGTAGGAGATCGGCAAACACATGTAGGTGC
ATTAATACTGCTACGTGACAGCCCAATTATGCGGAGGCCGAAAAACGGAGGAGCGAAAGA
CTGGGTGGTCTGGGAGTTCCCACATGCTAATGCGAATGCTAATCTAATCATGCACGCACC
GATGGCGCCACACGACGCGAACCCACTCGGATGCTTCCCGGTTACCGCCTTTCCTTGTCC
GGTTGCAGTCTGGGATTCATCATCCACCAGAACCAGAATGGTTCCGTCTCCCGCGCCATG
CCATGCTGCTGCTGCCCTCCCAGTCCCGCACCCCCACGCCACTGGCCACCTCGGTGTCTG
AAGAGCACGTCCCGGTTCGATGATGGTCAAAAAAACCTAACACAGGTAGAGTATATAAAA
ATAAAAAATAAATGAAAAGCCGGGACATTTATCCCCTCACGCCCTTTTAATACCGCCACC
TCCAGAGCTCAGCTCAGCTCATCACTCCCGCACTCAACACTTCCGCCACCTTGGGCTCCT
CCTCCATAGCTACTAGCAAAGCTGAGCTAGTAGAAGGTAGCAGCCAGCCAGCCAGCCACA
GGGCTAAGATGGCGTCGCCCGCCTCCTTCCTCCCGCTGCTTTTGCTCTTGCTCGCGGCGG
CGGCGCATTGCTCGCCGCTGCCCCAGCGGTGCCCGCAGGCCGACCGGCAGGCGCTGCTCC
GGGTGAAGCAGGCGCTGGGCAACCCGGCGACGCTGAAGACGTGGTCGCCGGCGTCGGCGG
ACTGCTGCACGTGGGACCACCTCCGGTGCGACGAGGCCGGGCGCGTGAACAACGTCTTCA
TCGACGGGGCCGACGACGTGCACGGCCAGATCCCGTCCGCTTTGGCCGGGCTGACGGCGC
TCATGTCGCTGTCGCTGTTCCGCCTCCCGGGGCTCCAGGGCTCCATCCCGGCCTGCCTCA
CCTCCCTCTCCAAGCTGGAGTTCCTCACCATCTCCCACACCAACGTGTCCGGCCCCATCC
CGGAGTCCCTGGCGCGGCTCCACAGCCTCGACTCCGTGGACCTCTCCAACAACAAGCTGA
CGGGATCCATCCCCAACTCCTTCGCCGACCTGCCGAGCCTCCGGTCGCTGGACCTCCGCC
GGAACCAGCTCACCGGGCCCATCCCGGCCAGCCTCGTGCAGGGGCAGTTCATGTCGCTGG
TGCTCTCCTACAACCAGCTGACGGGCCCGATCCCGCGCGACGACGCGCAGGACGAGATCA
ACACCGTGGATCTGTCGCACAACCAGCTGAGCGGCGACGCCTCCTTCCTCTTCTCCGAGG
CGCGGCCCATCGGCAAGGTGGACCTGTCCTACAACAACCTCGACTTCGACCTCAGCAAGC
TCAAGTTCCCCAAGGAGCTCACCTACCTGGACCTCAGCCACAACCGCATCAGGGGCACCG
TGCCCAGGTCGCTGGAGGCGCTGTCCACCCTGCAGACGCTGGACCTCAGCTACAACTGCC
TCTGCGGCCCGCTCCCCAAGCTGCACGGCGTCATGCGGCACGGATGCAAGCCCTACGAGC
ACAACCTCTGCCACCGCGGGGCGCCGCTCGAGAGCAGCTGCCACCAGCTCTGAGCGACCT
CGCCGCCGGCAGAAGGCGGTACGTTATATGACGAGTGGTGTCTGTCAGTGTTGGCGTTCT
CGTGCGCGTACGTGCGTGTGTACGAGCTACGAAGGACGGTGCTTTGGGGCTTAGTATACT
AGTGGAGTGGAGTACCGCGCTGGTACTGTGGTAATGCCTGACAAGCGCGGTCCTTGAGAG
CTGCTAGCTTTGTGTACGACCAAACGATAGAGATGTGTGCGTGCTGTGTGTGTGTGTACC
GTCTGGAGATGCGCTTCCCCGAGAGAGTGTGTGTGTGCCCGTGTTCGGGAATCGGGATGG
ATCATGTATCAAGTGTTAAATGGTAATTATGCTTGGCTTACTTTTACATGACTTTTTGAG
AGGCGTCCAAATGTTGGTTGGTTTGTACTACTCGGGAATTTTGGGAATTACATGTACACT
AGCCCTGCACTCCTTGGTACGTGCCGTCTTTACTCTTCGATTCGATGGTCGCAGCAGAGG
ATGGGTGAAAACTTAAAATTTCAGTTCATCGATGCACCTACAACAAACAATAGATGTCTG
AAGGATTCAAAAATCGCAATGCTGTTGGAATCTGCTAGAGCAAGCTCAGCTGCATCAGGA
GGACTAGAACCTGGCAAACCTTTCTAACCTTCTTCTGATTCCCACCTCTCTAACCTTATT
CCGATTCCCACTAACATGAGTACTCCCTCCGTCTCGGTTTATAAGCCATCTTACGAAAAC
CAAATAATCCCAAAACACTAAGGCACGATGTATTAACTTTCACCTCGTTTCTTGTTTTTT
TGACTTAAATAAAAGAATCAACCAATAAGAAACGTGAGGCGTGTTTGTTTTTAATGACTT
GAGACTAACTAGCACGACATGCACTGGTGAATTCATTGCATGCAATCGTATTAACTCACC
TCGTTTCTTGTTTTCATTTCCGTCTTGGTTGCGGTGCACAACCTAAGATGACTTAGGCTG
CTCATAGTGAGGAGTAACTAAGAGTAGTAACATGATGATGTTATTAGTCTATGTTACTAC
CTT