Contig Data
morexGenes
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Map Locations of contig_274893 (4846 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_274893

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44532 1 2024 bp MLOC_44532.1 Available Available LOC_Os11g33100.1, FRAME:-3, EVALUE:5e-62, 13111.m03235 protein SNARE associated Golgi protein, putative, expressed





CDS Structure of MLOC_44532






Contig Sequence (4846 bp)

>contig_274893 4846 assembly3_WGSMorex_rbca.fasta
TGAAATATACTTGGATAAACATATTCGTCCAATGATGCATATGTTGTGATNNNNNNNNNA
AACCACCCTAGGGAGCAATTGTGATTTCAATGGGGCTTCCCTCCTTCGCTTGATTAGTGG
GTGTTCTTCATCGCCTTTCGATTTTCGTTGACCATGTGGTCCTTCTCTTTCGACCTATCG
CATTTGAGGCCTCCACCGCCCTCGCTGTACTCCGGGCATTGTGTGCGATCCATGACCTAC
ACCATAATCTTGGGAAGTGCTCCATCTCACCTATCGATCGCGGCATTGTGGTGCTTTCCT
CAATCATTGATGTTTTGGGCTACCTCATCCGCCCCTTTTGGATAACCTACCTAGGGTTGC
CCCACCTCTCTCTTAGCTATTCAAAACTAACCTCCATCCATGTGCCTTAACTTTATCTAG
ACTAAGTGCAATAGCCGTGTTTTTAGAGTGCATCCTATCCTATGGCTTCTCTTGTCGGTC
GCATCAAAGCTGGATTTCATCTATGCCCTTAGCTAGGTTGAGTGTGTCAAATCGAGATGA
AAATTAATCTTCTTTACGTGTGGAGTTGCCCTTGCGGATACTTCTGTTGTCAAGTGGCTT
AGCCTATAATGCTACTTCTTCCTTATTGACAAAGGCACGCAATCCTCTTGTATGTTCTTG
AAAAAAAAAGTGATGCCAACCACACCAAGTTTTTAACCGTTGAGCATCACCCATATTTAA
TCACATGGGACAATCAAATAGTGATGGTGGTGACACGCACGATGCCTCAAACTCGTATCC
CTTTGCTCGTACCCAAGGGCACCCACCCGCTTAGGGTTTCTCGTGCCTCCCAGTGGTGTC
GACGCTACCGACGGTCTACCTCATCTCTTGTTGTCTAAGGCCATGGAGGTCTGGTGGATC
CTGACCCTCTGCTAGTGGGAGGGCTACAAGTTAGGTGCTTTATTTAGTTTTGTTCGGGTT
TGTGTCTTGCTTAGAGAAACGAAGCGACGACGGCTCACTGAAGATGGAATAAGATTCACG
GATCTCGTGGGATTCGGCCGGCGTTTGTCTTTGATGGATCCACATGGATCCGGTCTTTGT
TCGTATGCTACGCATTTCTTCATCTCACATGATTGCTATTCTAATGCACTGGTCCTGTGG
GACCTTAACACAAGGACTTACAGACTATCTCCTACAATCAGGTTTGTCCTGCTCTAATGA
GGAAGTGGTGATGATCATAGCACGCTTTCGCTCGCTCCAATCCTTGTACTCATTGCTAGA
CGGTCTACGGACCTGGATTTTTTTTGCTTCTGATGTTCTTTATACTACCTTAACGTGAAA
GTTTTGCTGAAAAAAAAATAACGTGAAAGTTTTGCTGAAAAAAAAATAGTGATGATGTTC
ACCAATGAGACGGTGACCGTATGGAGCTAGGGTGCTTGCGGAGTAAACCGTTCATGAACA
TAACCTGAGAGATAGAGGAGAAAAATCATGGGTTTAAATAATGTGATGGGGAGTGCAACC
AAAGCCAAATGATTTCTTGGAGTTCACTTAAGAATTTGCTTTGGATTGTGGATATAAGTA
ACTTCTCATAGAGAATGCCAAGAATGTTCTACTTACAACAGCAAACAAAATTGATTCAGA
GAACATGTCTAAATTTTACAATATGGTGTCAGTTCAGTACAAGTGGATACACTTCAACAA
GACAACCGCAAACAACCACATACCCTCTAACTAGAATTTAACATCTACAGTAGCTCCCAT
CAAGTCTTACCTTACAATAATTCTCAGAAAAAGGCTCAAATCTGACTACTGCTTTAAAAA
TCATCTTCTTTTCCTAGTTTTCTCGGAAGAGGTATCTTCAGATTGCGCCACAGCAGCTTG
GCATCCTCATTGATGTTTCCATTAGTGGGTGAGTTTGTAAGATCTTCAGGAATTGCAAGG
GCAGAAGAGTATTGCTTAATCCTCAAAGAAATGAGAATGCTGGATACAATTCCAAGTATT
GGTAACAAACAAGAATAGACAGATTTCTTAGATCCTGTAGTGGAGGCCACCGCTGCACCA
GCAAGGCTTACAATGGAAACATTCTGTAGGATCATTGGTAAACAGCCAGCAATTGTAGGA
AGGAGAAAATCTCTGAAAAATCCAACATCGGTGGCAGATAGAGCGTAGTTGATGATGTAT
GAAGGCAGTGGAGAGAATCTGGCGAGTAACACAAATTTCCAGCCATCCTTCTCAACACCT
TTAACCACAACATGGAAGTACTTATTTCTTTGTAACCATTCCATTGCTGAAGCAAAATAT
TTGAAAATTGCCCTGGAAAAATACGGAAGAACGATGAGAAAAAAGGACTGGAACCAAATT
ACAAGCAATGAATCTACTTGTGTGCACAGACTGCAGATTGCAAAAATCTCAAAAAAAGTC
AACATCAGTGGCAGATAAAGCAAATGACTACAACATGTAGCCATGGCTGTAAAAGCTGGT
AAGGCATAAAACGCGTTTCAGGACATCAATCTGCAAGATACACATCACAACAGAGGGCAA
CCAAAACTAAATCCATCTAACGTGTGAAGTGTTAGACTTCACCGAGGGCACAGTAAAGGC
TAAGGGCCAGCTTGCATGGACGTTTTTTTGGTCAATTCGGGTGTAAATTACAGGCACCCA
CAAAAATTCATCATTTCCAAAACCGCATGGTTTGCCAAATAGAACCTCTGTTGACTAGAT
TGAGCTGCCAAAACGTCTTATATTAGTCAACAGAGCAAGTACCACTGTAAAATATATAAC
TCTGTTTTCTTTTCCGTGGCTGCTCAATCTCCAGCGGCATCAGAGCAAGGCCCAGCTTAC
GTCCTTTACCACCACTCTGTTAGGGCACCCATTGCTGGCGTAAAATTGTTGAGCAGAATT
TCAGAATTTTCGACGAAAGGTGGATTTTATTTACTCAAAATGAAGCATCAAGTTGATACA
AACATTGTGAGCACACACACCACCTCTGCATAGCTAGGATGCACACAGCAAACACCAATG
CACACACACAAAAACCGTCGGCAAATAACATAGTCATATAATACCAAAGCTATACATAAG
CAAGCGATCAAATCCGCGATCGACAAACTATAACAATGACCATAACCGCACCAACCATTT
CATGACACCACAAAGAATACGGGATCTTCAACAGCAACGCCTTCACGAAGGGAGCGACAC
TCGAGCGCAGCCGTCAATGGATCAAACCACCAAGGCCAGAGTTTAGGTTTTCGCCCTAAA
GAACCAGTCTGAGCATATCCTACCAATGCCTTCAAAAAGGTAACGACCCAAAAAATATCG
CCATTGCCAGGTATAACCAACTACTCGAGTCAGACTTAGGTTTTCACCCCGGAGCTCGAG
ACCGAGTACTCAAGAAGTACCACCATCGAAGTCAATCATGTGTTACCGCCACCACTTTCC
TGCGAACGTAGCAACTGCAAGCGTTGGGCTAGGAAACTGGCCGTCACTGTTGCACAACCA
TACCCTCTGCATCAAGCCATCGTCCATAGATTGCATCTCCCCATCGATAGAATCTACCAG
ATATATAGAGCTCGAAAAGACCTTTTGGTGGCCATCGCAATCCGAAGTGAGGCCGCCAAC
GCAGGCCAGATTGGTCACAGCATGGACCAACTGTAACACCCCAAAAAATTTACCATGTTT
TTATTAATTAAAATTTTGCCAGGAATATTAATTTTTATTTTCTGGGCCCTCTATTGGTTT
TAGAACCATCCTTTTCTTTAAATTCTAAAAAAAATCCCTCCAAATAGAAACTTCTGAAAA
ATATTGTGGGACTTAATGTTTGATTTAAAAGTATTTCATTTCATTTTTTTAGAATACAGT
AAGAAATATTTTTGCCAAGCTTTATTTCTTTAAAATGGCATTTTCATTCTTTTAAGGGCC
TCCATTTCACTACAACCATTTTATATATTCATTCAAAAATTCCACAAAAATTTGGGGATG
TCATGTGATGCATATAGATCACCTTTATGCAAAAACCCTCCTTGGCCTTTTGAAAGTTTT
GAGCAAACCATCCTCATTTCAATTCTGGTCCAGTTTAGTGGTTTGAACTGCAACCCTATT
TTATTTTGTCCTAATCATGAGATTTTTCCTGCTTGTACTACCTCCTACCAAACCCTTAAG
TCCAATAGTTTAGCCCCATTGGAATATTTTAAGCCCGTGTAACTAACTACTGGAGTTTCT
GTCCAGAGATAAGGTTTTGTAAAACTTGCACTAACAAGTTTCTGTTTTTCCCAAACTAAC
CTTACCATCATCTTTATCATCTAAAGAGACTTTCCTCTGGAAAGTTGGGTGGCCAACAAA
GTTTTCTAGATGGCCCTGGCATTTTGTCAAGCACCTGGAGTGCATGGCCAGAATGATCCT
GAGATTGCATTATGGACTAGCTCCCCTGTCCAAACCAGCATGTCCTAGGTTACCCTCATG
CCATTGGTAACCATCCTGCCGAAGCTTAGCTCCACTGGACTGATCTGGCATACTCTGGCG
TTTCATCGAGCACCTTGGGCGCAGGTCCAGAGCATGCTTATTGCACGCAGCCGCGCCGAG
TCGCCGCGCCCCTGGCTGTTCCCTGCTCGGAGAGCCAAGCCAATGCCCCCTTCCCTCGCT
AGCGCCGCCGTTATAGTCGCCATGGCGACTAGCCGACAGCCGCGTCCACCCCCTGCCATG
GCAGCGCCGCCCAACCTCCCCGCTCGCCAGCTCGTCCGATAGCCCCTGCCGCCATTCCAA
ACCTCGCCACGTCACCCCTTGACAACAGTGGCGGCGAGCCGCCGTGCTTATCCACGGCCG
TCGGCAAACCGCCTCTCGATGCCTATAAAAAGCCCCCCCCCCCCCC