Contig Data
morexGenes
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Map Locations of contig_274828 (2953 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_274828

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44498 1 742 bp AK365877 Available Available None
MLOC_44497 7 2945 bp MLOC_44497.5 Available Available LOC_Os01g56260.1, FRAME:-1, EVALUE:4e-11, 13101.m05950 protein hypothetical protein





CDS Structure of MLOC_44498






CDS Structure of MLOC_44497






Contig Sequence (2953 bp)

>contig_274828 2953 assembly3_WGSMorex_rbca.fasta
GCAACTCCCTTACCAACTCCTCATTATCAATAACAGGTTGATCAATGCACACAAGGGAAA
ATTCAGCACCTAACTCGATACCACCAGCCTTGGTTCTTGGACCAGTACTCCGAATAGTAC
CAAACGCAACATTCCGCTTGTTGGGATATATTGAAGTCTTTAAAACTACTTTGGAATCAA
CCTATATTATGAACAATATTAACATTGAATGATAATGATCGGTACATCCAGAAATAATTG
GTACAAGAAAAATAACAATTCTCCAAAAGGCACATAATTACTCCAAAAAGGTATCAATGT
TCTCACTTCAGCAAAGAAATCAGTAGCTGCCATACCAGCAGAACTCTACCGACCTGATTG
GCTGGAGTTCTTGGTGCATATAGTAGACCGCTTCTCATGTGAGTACATTACTTTTTAAAA
ACAAATCTGGGTGTAATACTCATGTACTTTGGTGGTCATATCCCTGCTTAATTTTGATGA
ATATTAATCTCCAAATTATTATGAAGCATAAGTTTGAACTATTCATTAGTTTCAGCTTTA
GTATAAGGAAATACGACCACCATGTGATGTGGACATCAATGCTTGATTTCAACTTTTAAG
ACAAGGGTAGCACTGAACAGATTTTTTGTAGTCTATTTAAGCAACGAAGATATATATTTA
CCTCCTACGGAACTGATGTTGCCCTTCATTACACGAAGTATCGCTGTGCAGCATTCTGGG
TTGCTTCCAGTCATTAAGGAGCTGGTGAGATTACTTCCGAAAAGGTCTTGTGAAAGCTCT
CTTTGCAACCTAGACAGTGTGACCTTTAACCTGATTATTTACTTAATGTTGAACCTATTT
TATCCGTTTACATGTAGCATAATTTGAAATTACTGTCCTAATGGGACATGTTTTAGTTTT
AAGTCACATAAGTATTGTTTATGCTTTCTTAAATGTACCTTTTACTCTTTAGTAGCAGCA
TTCGATTAATGCGATATTGTTTTTCCTCAGTTTGCCTTGTGCCTGAACATGCTGCAAAAA
CAATCGTCTTCAGTCTTCATAGCTCAAAAAATGAGATGGCTATAGTAACCATTTTATTGA
TTTTGGATAATATATATGTACAAGTAAATTTAATGTACTGAAGTGAAGCATGTGTCTACC
TCCATTTTACACTTGGACCTATGAAAGCACGTGGATATTTATGCTGGACGGAGGATTAGC
TGGAATTTGTCATTGATACTTTTGTGAGGAAGCTGCTACAAATACGGAAGGATTCTGTCC
TATATTATTACTAATCAGGACACTCCCACCACTCAATGACGATGCGTTCTTGGGAGCTAA
TGAGTATATCGAAACCATGTCCACTAGGCATGCAGGTGGATATTTACCAAAAAGCTATAC
TTACATCTCTTACTGTTTGGATTTCCTATGCCTCAAGTTTGTTTCTCCGCTCAGGTTTTA
GCAATATTGACATTGTTATCTTGACTCAAAATATATTGTTGCATCCTGTAAATTTGAGGT
TGAGTGTACAGCTGACTTTCAGTCAACAACTATGCTTTTGCTACAATAAATTATATTTTT
TTAAGAAAAAGTTTAGGTAGGAACAACACGAAGCCGCTCTATGGTGAACAAATACATATG
TATAAAACGTACACACGATATATATATTAGAGTTTATGTTAAATGGAAATTCGTTTCTGA
TTTTTATTATGCCACCAACATGCCTAGGAAAAATAATAGTCCTATGCAGACAAGATACTA
TGTGCCATAGATATAGCCTGCAATCTTGTGCACTTGAATTAGCAAACTCCGAGTCTCAAG
ATAATGCGAGTCTATGCTTACGTATAGAACTTGTGCATCAATATAACATGAGCACGTTTC
AGATTCATACATGTACTCATGCTTTCCAATTAACCATCCCAACTAAACCCCCAAGAAATT
GGTCATTTTGTCAACTTTGCTCCTTATTCGCAGAAAGTGACAACTAAAGAAGAAGGATTC
CGCTGAAGGTGACAACAATAACAATTCATAGAAAGTACTCTGAATTTCTCCTCCTTTTCC
AGTTCACTGCCATAGATTAGCTTCTAGTTTCCCATAAGTGATCTGTTAAACTATATTGCT
ATAATTGCATACATGTGTATTATCAGTTTAAGCTAAATCTTGTTATGTACTGTCCATGTG
GTGGCTAACGGCAAATGGCATAGAACTTCCGTGAGATTTGAATTCTTCTTGATGCATACA
TATTGTTCTATCTTTTGAACTTACAAATATGAAAGTGCTTACTGTGATTTCTACTTTGAT
CTACCTTTTGGTTTCTGACTCTGGCAGCAAGAATCTTTTCTTTCCTTAGTTCATACTCTC
CTTTACCATAGTATAATATATAATATATATTATAATATTTTCATTGTTCAGAAACAATTA
TTTTCTCAAATTGTATTCATCTTTTTGCTGAAAATGATGTCAAAATAAATAAATGGTTAT
TTGCCATATCTTCTGGTGCAGCGAAGCGAGCATATGTTTGATAGAGAGACTACTAGGATG
ACCTTCACGAACTAAGGAACAATCAGAAGCAGCGTATAAAAGAGGGGATAGAAGCCGAGG
AGAATATACATTCACTGTGCTGCTTTGCTGCATGCGGCAAGCCACGATAGCTGGTCGATC
CGTACATGGACAAAACATGGCACATATCGGGGGCCTCTTCTTCCATCCCTCGCCCCCCTC
TGGGCCGGCCCTGGTGGTGATTTACCTAGCATGCGTCTCACAGACAGATCAAGAAAGGGT
GAGCGTCAAATTCATACCAGCCACAAGATCGTATTCCTTCAGGATGTAGGTGCCAGAGCT
GAAGACCGATGAAGCCGTCGGCGCAACAATCCGAACGACGCCGAGGCAGATCGAAGAAAC
GGCGCCAAGGCAGGCAAGTTGAGGAAGCGGCAGATCGATATGGGGGGTGAGGTTGGGATG
GGAAGGGGTTGCA