Contig Data
morexGenes
Links



Map Locations of contig_274815 (6581 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_274815

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44489 3 1384 bp AK363036 Available Available None





CDS Structure of MLOC_44489






Contig Sequence (6581 bp)

>contig_274815 6581 assembly3_WGSMorex_rbca.fasta
TGGGTTTTTCACGTTGGCTCGCCACGCCTATCACAACCCTCCTCCTNNNNCCGGGCTTGG
GACCGGCTATGCTAAGACAACATAGGCGGAGTTATAGGTCAGATACAACACATATATAAT
TCTACAGATCAATGAGCTTCTAGGTTACCTCAGTACTGTGTTTATATTGCGATATGTATA
CATCTCTGACTATGGTCCAGTGTGGTATTATTTTGTTTCTTCAGTTCCAGTGCGCGCGCA
CGCACACACAACTTACATCTAGGAAGTAACATGTTTAGCAGTCTTCTAAACGATTTAATG
AGTCCTGTTCTTGTATGCAGTGCGGAAGAACAAACGAAGCAGAAATGCAGTTTGAGAAGC
TTCTAGGCCCTCTTCACGTAAAGTCTGCTATGGCAGAACTTTCTCGATCGGAGAGAGGAG
ATGATGGGGAAAGTGTGAAGTTCTCAGAGTTGTTTTATGGTCGTCACTTCAATGGTACAA
GCTGTCGATTGTGTCGCAGTTTTCTGCTTCAGTGTTACATTATTTCTGTTCTTCCTTGAA
GTTTGTTCATTACAAGTCCCTTTTTTGCTACAGTTGTTTTTATTGGCACAACGCTCTTTG
CTTTACAACAGTTATCGGGCATAAATTCTGTGTTCTATTTCTCATCAACTGTGTTCAGAA
GTGTGGGGGTGCCCTCTAGCCTTGCCAATATATGCATGGGGATTGCAAATTTATCAGGTG
AGGCCCTCAAAGCTGTTTGTTCTTCTACTGCCATGTTATATTCAGTTGCTGATCTTACTT
TGTTGTGTTCGCTGCCAGGTTCTATTGTTGCTATGCTTCTAATGGACAAACTAGGCAGAA
AAATGCTCCTTGCAGGAAGCTTCTTTTTCATGGTGAGCAATTACTGTAATTGTAACTTGT
AAGATATATGGAACACTACTGACTGTGCTTCCTTACTGGTGTAACGTGTAGGCCTTCTCA
ATGGGACTTCAGGCTATTGGAGCGAATCGTCACCTTGGTTCTGCAAGTGTGTATCTTTCA
GTTGGTGGCATACTGCTGTAAGTCATGCAGTTTTATACATTCAGTAGCTTCCTACCATGC
AAGTTTCTTATCCTTTGTTTTGGTTCTTCAAATCATCTACGTTCAACGAATAAGTTGCCC
CAAACCACCACTTTAACGGTCACTGTTGCTCACTACCACCTCAATATAATTTTGAGCAAA
ACCACTCCGATTCAGACATGCCGCATATAACCCAAATTGCCGGCTTAGGTGCGTTCACAG
AAATCTGACAGCCTAGGCTCACCCATCAGCCCTGAGGTGGCTAAAGGCCTCGCCAAGTGA
GCAACACATGTGACAGGGGTGTGGAATTTGATCTATGATATTCCCCTTCTCCTCGCCCAC
CCCCACCCCAACTCATAGCCACACTCAATATTTGCACCTGTAGAGGTCAAGGACTCCGGC
TATGCCACCACTGAGCCACTATGGTAGTTACTTTCTATTCAGTTAACTTGTATGCTAGTC
ACCAACATATGAAGCACTTTGCCTATGCGCTCTCCTGATCTTTTTTGCCAGTTATATTTT
CTTTCTTACAATTATAAGATCATTATGGAACATATGTTACTTATAATTGGACATTTTGTT
GGCAGGTTTGTCTTGGCATTTTCGTTGGGAGCAGGCCCAGTTCCAGGACTTCTTTTGCCT
GAGATTTTCCCGAACAAAATTCGGGCCAAAGCCATGGCTCTGTGTATGTCAGTGCATTGG
GTAAGAGTTTTCACTTTTCAGCATGAAGCAACAATTGATTCAAGCTAAATGTTTTTCATC
GGACCAAGTGAAATCTGCCAATATGGAAAATTTGTACGCATATTTGCCATGTGCATTTTA
AATTTGTACGCTAGTTTGCCATGTGCTTTGTTTCAATTGCAAGTAACTGCATAAACTAGA
AAAGAACGAAAATGCCTTGGTGTTCGGTAGTGTTCAAATTTCGGTAAAGAAACCTGCACA
CCCTTTGAATGGAACATGGAAAACAGACAGAAGGTTATGGTCGTATATCCAGTTATATTA
CTGTGAGCAATTGAAGAATTGACTATTTTCTGTCAGTTATGGGTTAGCCAGTCTGAATTG
GGCATAGATTCGAATGATTTGAAGTTGTAAGTAGCCAAGCAGTTCAAGTCACCAGGCTGC
AAGGGGGTGCCAAACTGTTATACTAACCATCTGCATGCTTATGAAGATTGAAGACACATA
ATTTTGTCGTGGTAATCAAGTGTTAGACGTTGTAGGCTGAAGCCTTTTTTTAACAAAATT
AATGCATCTCCCATGTGCGCAACATAAGTACCCGTGAACACCTTTTGTGAAGGAAATTTG
TATACAGTCAATCCTCATCATGCAAGCATGCTTATAAACTACTCCCTCCGTTTCTAANNN
NNAGTCTTTTTAAAGATTCCACTACGGACTACAAAAGGAGCAAAATGAGCGAATCTATAT
TCTAGAGTATGTTTATATACATCCGTATGTAGTCCGTAGTGGAATCTCTTAAAAGACTTA
TATTTAGTAACGGAGGGAGTATAGCAAGATATGGTTGCTGCTGTATGTATGTAGTTTAAC
CAGCGGTTAAATCAATGCAGACAGCTTCTGTAGATTTTTCCAATGAAGAGCTGAAATACC
AGTAGACAGGAATGCACTAGATATCCTTGATTATAGTTCTATTCTCTGTCAAATTTCCTT
GAGTTATAATCGTTTCCACTTTTGCTTACACACGATGATTGACTGCAATGGGCAGGGCGT
TAACTTCTTCGTTAGTTTGTTATTCTTGCGTCTTTTGGAGCAACTTGGCCCACAAGTCCT
GTACACAATGTTCTCATCAGCGTGCGTGGTAGGAGCAATATTTGTGCGGCGACATGTTGT
CGAAACAAAGGGAAAAACTTTGCAGGAGATAGAAGTTTCACTGTTACAGACACAATAAAG
GTAACACCCACTGCGCTTTCCCTCGACACAAACCATTTCTGATAATCTCTGTCTAATTAG
GGCATATGGTTTGCGAGCAACGCATTAAGTAAACTTGCATGCTCCCGCCATTGCAGGTTC
CACCGAGGCAGTGCCTTGTTCTGCACGATGAGAAGGGATGAGCGACGTTTTGTTGCTGAA
CACCAGCTGGGCGGGCCGTCTGTTCCCAGATCAAGTGATCTGATCATCTTTTGCGGACAG
AATGTCCCTAACGCTCGGTGCAAGTTCCCGCTGCCGGTGCGTGACTGCCAGAGCAGCGGC
ATACTATCCTAGGAATACATACATACATACATGACAGACTGGTGAGGAGGTTTTTTGGTC
TGTAAAGGCTGATAGTTGGCCCTATGTACTATATTGTGTTGTCTTGTGCTTAACTGTTTA
TCAGTAAGGGCAGACTGCATTTTGGATACTGATGAACGAACACTGTCGAAACAGTTCACT
ATTGTTTGGAATTGGAATAATAACAGCCGTGACATGCCTCGTCGGATGTATTCTACTCCA
GCTTCTACCCGGGCATGCTCGGTTTATATATATGGAAATGAAGAGCTAGGTATCCTGTAT
TCCTGTTTAGAGGTGCCACTGTTTCAAAAACAGGAACTTGTTGAAGTTGGCTACAGAAAA
CATAGAGCCACAACTTGATCTTCAAAGAACCACCGATCCTGAGCCTGACGGCGATTTTGA
TCCATCTGCGAGGAACGCGTTGCCCAGGAAGCTCGTCTTCGGAAATCTCCGTGTTGCGTA
TGTGCCTGCCCAATGGGTTTGGGTTTGCAACGACTATCTCTGAATGGACTGGATGATACA
AATGGACGTGGCTCGGGCGGTTGTGAGTTGCTGTGAGTGAGAGATGGTAGGGAAAATGGT
TGCGGCGTTTTGGTGATTTTGAGTTTGATCTATAAGGACATTGCACGAAAAAGTATCACC
TCCCATCTCTGAATTCCCTTTTGATCTATAGTATCACTGCATCATCATACATTCATACAC
ATGGACTCCACTATATCACTAGAATAAAAATAGGATATAATTTGATTTTGGATATCCAGA
AAAGAAAGAACTCATCCTTCTTCTTAGCAACTTGTCTTTCATAAACGCAGGGGCCATCAA
CCATCATCCTAGTTGCATCTTTAGGGATATAATCTGAAATTATGAGATCTCCTCGTCAGC
GCTTTTAGTGTCGGTTTGCGTCCCTGGCGCCCACGTGCCTGAGAATGTCGTCAGGCCCAT
ACATGGTCGCTGGGATCGCTGTTGCGGTTGCGGTTCATCGGTCAAACCGCTGACTTTTGT
GAAACTGCAAAAATAATAATTAAAATCACAAAATAAAATGAGTTCACAGTTCATGAATTT
TGAAAAAAGAAAAATATTTTTATATAAAAGTACATGGATTTGGAAACAATTAATTGATTT
TTGAAATAGTTTATAATTTTATTAAGTTCAAGAATTTTGAGAAAAACATCTCAGATTTTT
AAAAAGTTTATTGATTTTTAGAAAAAAAGACTAACGATTTTGAAAAAAGATCAGGAATTT
GGCGAAAATTCATGGATTTATAGAAGTCCTCGATTTTAAAAAATCACAAACTTGAAAAAA
ATATCATCAACTTGATTTTGAAAAAAATATTCATGGATTTGATTTTTCTTTGGTGGCTGC
TATACGTCGGCCAACAGATCTCTTAACAGGATTCGTCGTCTCAAGAGTCGTTGGATGTGA
CACAATCTAGTGGCTCAGTGTCTCCCTCAACTTCGTAACAGAGATCTTAGCACAGAAACG
TTTGTAATAAAGGTTATATTGCCGAATATGTTCATTGCAACATAGATTGTATCGTGGGAT
TTTTTTTGCAACAAAGTTGTATGGTCTTTTCAAATGATCAGTTGGGTCGGAAGTCGTCGG
ATACAACACCAATCTTTACAGCAGAGACCTTGTTGTAGAAATATTTTTTTTACCTACACA
TTTTTACAACATAGGTGATGTTGCGGGGAAAACTTTTGCAACATAGATTATGTTGAGGAA
AATTTTGCAACGAAGAGATGTTGTCGCTGTTGTTCCCGAGGCATGTCACAGCACCGCCAT
CGTTGCTCACCATCCCCGTTTGCAACTCCGTTGTTGCAATTGCAACAGGGACATACTCGA
TTTTAAAAGATACACATAACAATATCTAGTGAAGTCATCAATCAATGTCATGAAGTATTG
CTTTCCACTTTTTGTCAACACGTCATTCATCTCACAAAGATCTGATTGTATAAGATCTAG
TGGCGTCAAGTCTCTTGCCTCTGCAGTCTTACAGGACTTGCAAGGTTGTTTAGCTTGCAC
ACACACTTGGTATTTGGAGTCATTCACAGTAGTGAATTTCGGAATTAAACTCATATTGGC
TAGCCGCATCATGCAACCAAAGTTAATATGAAAAGACGTGAATGTCAAACATTGGACTCA
TTATCGTGGCAACATTATTAATAAGTTAGTCTAAATATCTCACAAAGACAAGCGAAACAA
GCCTACGCACTCATAGCCCTTTTCAACAAATTGTTCATACTTCCAAATTACAACTTTCTT
GGACTCCAAAACCAACTTAAATCTGTTTCATTATTTTCTTCTTATATTTTTAGTGGCTTT
GTAGGAGTTTTGGCAACATATCAAATACTATACTCCTCATATTTTTCCATAGGATTTTTG
GAGGAAACTCTTTCAAGATGATGATGCTATCTGGACAAGCATGGATTAGGGGGAGTGTTA
AGATTAATTAACATAGTAATTATGGGATTGATCCCTACTTGTAATAACTGTTGGTAGTTG
CTTTCTGCAGTCGTTGCGTCGTTTGTTTGAACCGACGCTCCGACACCCCCTTGTAAATGC
ATGTTCCAGTGCTATATATATCACTTCATCTAATGCAAAGAGGACAGTTTGATCTCAAAC
TAATCGAGTGCATCGCGACAATATTTTTGTACCACCCTGGTCCAATTATTAAATCTAATC
GACCCAACCAAATGCATAGAAGGAAGAAAACTAGAGTATGCCCTATGGGCGAAGGTCGAT
AAGAGACAATAGTGGTATTTTAATAAGAGACATCATAGTATGCACCATATCCAATAGGAT
GCAGCTATGACGTTCGGACACACCATCATACTATGGTGTTCTAGGTGACATGAGTTGTGA
AATAATTTTCACATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNATCATAGACATATTATCCTCTTGCCACGATGATCTTCAACTTCACTCTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATACACCTGTAT
CTACTCAAAACATCACTGAAGTAAGAACATAACGATATCCATTGCGTGCCTCAACATTCA
TTGGACTGCATACATCAAAATATACTATTTCCAATAAGTTTCTTGCTCGTTCCATCACAG
GAAGACGAGGTCTTTAGTCATCTCGTCCATGTGGCATTATTTGCATGTCTCAAGTAATTC
AAAATAAAGTGATTCCAAATGATCCATCTGCATGGANNNNNNNNNTGCGTTTACACCAAT
AGGCATGGTCCACATATCTCAAATGATTCAAAAACGAGTGA