Contig Data
morexGenes
Links



Map Locations of contig_274726 (4656 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_274726

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44423 4 2974 bp MLOC_44423.2 Available Available LOC_Os02g18370.1, FRAME:-3, EVALUE:0.0, 13102.m02061 protein transposon protein, putative, unclassified, expressed





CDS Structure of MLOC_44423






Contig Sequence (4656 bp)

>contig_274726 4656 assembly3_WGSMorex_rbca.fasta
GCAAATATTTTTGCGGGGCGCGGCAAAATCTCGGCCCCAACCCGCGTATTCACGGGTTTC
CCCTTCGCCGTTGCGGTGCCCTGCATATAAGCGGAAGCGGTTGGTGGAAGGGACTTTTCA
GCCCGTGCGGGGTTTGAAAAAGCATATTCATGCTTTTTTACGTGTCCGTTATGCAGGGTC
TGCATCCGCGGCCGTGCGCGCCGGTCCGTAAAGACGTTTTTTCACGAACTACGAACACGT
TTTGCGGGCCAGACGGATGCGGGGTCTGCTAGAGTTACTCTAAGGGACCGCGTATAAAAA
AAGATGGAAGTGATGGCATGTGTTTACATTCCGATTTGTAGCCGCTCGATGACCCTCATT
TGTAACCCCGGTATATTTCGACACATTCTCCTTTTTTTTTGGGAGCAATAGGGGTCTCCC
CTGGTTCCATTTTATTAGAACGAAACCAAAATAGTCAGTACAACAAAATGTCATCATGTC
CAGGATAGCTGGTCCAGCTAGATCAACAAAATAGCTGGTACAACAAAATGGACGTAGGGA
TGCAAGCTGCCACGGCGGCGCGCAAGAAGCCGCTTCATGTTTTTCCAGCAACGAACCAAT
TAGTGAAGAGAAGTTGTTGATGCAGTTCATGCACACGAACATGAAGTTGTGACTTGATTC
GTTTATATGTCAGGAAGACATACGAAATCGTAAGCATGCTGTTGCAGTACAAATACAGGG
CAGCTGATTAATTGTTTCTGTGGGTTTCAATTTGCTGCAACTGATCATTGCCATCATACA
TCAGGGGTTAATTTTTCATGCCTGAATTCCTTTGGTTGCATGTCTGCATTGAAAATGTAG
ATCCTTTGGAGTACGTTTTGCCCAGCCGTACAATTGCACAACGCTAGCAGTAATCTACTA
CTAGATGTTTGACTGTGTGGCATTCTTCTTCTTGTACTCCTACTGTACAGTACTCCCTCT
GTACCTAAACTTGTAGTTGGGGAGAACTAGTCTAGCTCTCCCTAACTGCAAGCAGTTAAC
AGTCAATGCATGAATCATAGTGCATCATACGAACCATAAATCACTCTTACTAACAGAATC
ACGACGGCAAATCCGTAACAGTCAATGCATGAATCATGAATACACCTTAGACTACCGTAC
CGACCTAGTTGTCGGGTCACGACATTCGTCTCTCAAGTAGTACTGACAGTCATTTTAAGT
TACACAGGCAAAGAAACCTTACCAATGCTGCATTCTACATTGTGGACAATGAATGAAGAG
CTACACTTCCTCCTCCTTCCGGGCCAGAACAATAGCACATCTTGCTGCTGTTCAACATGT
CCACTGTCGCCCAAGCTCAACCAACACGTACCATCTAAAAGTTATCATTTGCCATCGTCA
TCGTCGCCATTTTCTCCCGGATCCGGTCCAGCTCCAGCATGAACGCCTCGCATTTGGCGC
CGTCCCCGCAGATCTCCCTCCCGATCCCGGCCGCCTTGCTCATCATTGCCGCGTACCTCG
TCGCGTCCTCCTCGCGCCGCACCGCCGCCACCACCATCCGCCCCTCCTCGCACCGCTCCA
GCTGCTCCTCCCTGCACCCGTCGGTCCACCGGGCCATGATGTACTTCTCCGGTATCTCGT
CGATGCCGAACTGCGTGAAGAGCCTGAACACGTGGCAGCAGAGGATCCCGTCCCTCGCGA
ACTTGGCGCACTGGCACGTGTATGTGTCGTTGACGCCGGGCTCGACCCACACCTCGAAGA
AGTCTCTGTCGTACTCGGGGTTCTCATAGTTGGAGGCTTTCTCCAGCCTGTACAGGGTGC
CTATTTCTATCTCTCGAACTTTGAATGCTGTGGAGTGGAGGAGCTCCTTCTGGACCTTCA
GGAAGATCTGCCTTGTGTAGACGCGTGAAGCGTGCCTTTCTATTGGCTGCAGTGAGAAAC
ATTTAGGTTCGGTCGCCGATTGCTGTGCATCTTCCTCGTCCGTCTTTTTGATATTATCTT
GCATCTCCTCATACTTTTCAATCAGATTCTCTATCTTGTCCTTAGGAAGCAACACTTTCT
CTTTGAACAGGGAGAATGCCCCCTGGCTGCCTCTGGCTGAAACAACAAAAGGAAAGAAAT
CTTGCATGAAATAAACAGGCGCCCAGGTCTTCCTCATCTCCCACAGGAACTGGAGGTACT
CGTTTTCACTTGCATCATGTCTCTGGATGAGTGCGCTCCATCCTTCTTCGAATTCCGTCT
CTGTCAGCGAATTGTCAACCAAGCTGTCCAGCTCGGCTTTCATGTTGACTCTTGCTGCCA
CAAAGGATGCCATCTTTTCCTGGGCATTCCTGTCCCATCTGCAGAACCTGTGCCTTGCTT
GTGGCATGACCTCAGCTATTGCCTTCGCCATGGCTTCATCCTGGCTTGTTATGACTGATC
TTGGCATCATGTGACCTCCCATCTCTTTCAGAAACGTCTGGAGCATCCATTTGTAGGTTT
CAACCTTCCGATCTTGCAGCAAGGCACATCCTAACACGATTGTTCTCCCACGGTTATTCA
TCCCAGTGATAGGAACGAAAGGCATGTGGTGTCTATTTGTGCTGCAGGTGGTATCAAACG
ATACGAAATCGCCAAAGACTTCATAATCCATCCTTGACCTCGCATCAGTCCAGAAAACAC
TCCTAAGCGCCCCGTCTGCATCCTTTTGCACGGTGTAGAGAAAACAAGGGTCCTGGAGCT
GCAGTTCCTCGAAGTGGTTCAATGTTTTTTCAACATCCAAGTTTGCTTTCCTCCATTGTT
CGGCAGACTGCAAGATCAGTGCTTGTTTTTCCTTTGGTGGCAATTCCCGAAAAAAGCTAC
CCATTCTTCTCAAAATCTTGAGAATTTCTCCGGGAGGCACCCTGCTTTGCTGAAGAACTC
TTGAAAATGACCTTTCTTCAACTGACATGTGTTTTTGGCTCGTTAAGAATCTTGTGAACG
AACGGCTTGGAGTTAACGGATGGTTATGTTCATTCTGAACTGCTGTGAAGACCCATTGTC
CCTTGATAAGCGCCACCACCACCTTTGCCTGGCAATTTGTCTTCTCTATCACATTCTTCT
TCCTCTTCCTCTTCAGGTTAAGGTCCTCAACTAGCTTTACCTTACGGTTCCTGTTGCAGT
CTAGCTGAAACCTCTGTCTCTTGTAGTTTCTTCCCCTGACCACCACGAAACCAGTCTGGA
GAGCATATGTGTTGTAGTACTCGTGTGCATCTTCAAGGGTTGGGAATTTCATTCCAACTT
GCGGTGCTTTAACAGTGCCCAGTTCCTCAGGGCCAGGATAGAAGAACTTGCCTTCCTCTT
TTTCCGACTCACTCCCAGAGCCGCTGTCTGAATCACTTTCACTGCCTGTATCATCGCTAG
AAAGGTCGTCGATTTCCATAACATCAAATTCCTCAGCAGTCTCCAGCTGCAGTGAACGGT
CCACATAGCTGGCGTTTCTCTCCAGTTTAACTGCCAATGCCATTGATGCTTCTTCATCGT
CATCCATGAGCTCTGTTGACTGTCCCTGCACGCATGTGCACAGTTTATGCTAACCCGCTA
GGTATACTATATTGAAATGCCTGAAATGACAATGCTTGCCATATTTTGTTTGGCTTATAT
ACCTGATGCATGTTGCTGATCAGTTGTATCCTTGGTCGTCTCACCGGCTGTTTGCCAGCA
TCCAGACGTGGTTGCTGTCATTTCATTCCAAGTTAACACCAGGCATTAAGTAATTCCTAA
GAAGGGAAGGTGAAGTAGTGACTCCAACTACCTTAACGACGTTGCTCGCAGGTGCTGGCG
TCATCTCATATCCCTTACTACCCTGTGACACAGATATGTATGAGACACAGTAATTCAATC
TCAATGTGTCTGGCCTGTTTACTTCTATGCTCAAGTAAAACATGTGCTCAAGTACCTCTT
CTCCATACACCTGCACTTGGCGCAGGGTGGGCACATGGGAGCCATCATCCCCATCGACAA
TGTATATCACTCTCTTGTTCGACGAGCTCCCGGGGGTTTTCACCGAACTGCTGTTCGATT
TCACAGCCTGCAACAGTTCCAAGGAGCAGTTTTTCACTCAGGATCCACACACACCACACA
CACGTAATGCAAAGTCTCTCCTCAACAAAAGCTTCCTTCGAGAAATCTTCTTACCCCTCT
GGAACTGGCCGGAAGAGCGGCAGCTCCTGGCGCCTGCTGAGCGTGCCCACCTGCTGCCCG
TGCCGGCAGCTCACTGGCCGTCTGAACAGCCGGCTGCGCCGGAGTTGCGGGATCTTTGGC
CTGAAAGAAAGCGATTTGTCAGGCGTAAACCCTGCGTGGCCGAACATGTATGGTGGTTTC
TGAGGGGCATTACCGTGTAAGTAGCCAGATACTCCTCCATCGCCGGTGTCCTCCGCCGCC
GCGAGCGCGCTTCGGCGGAGGTGGACTGGGGGGCTGGATCTGGATTCGAATGGGCTGAGG
AGTGGGGAGGGGAGGGGTTGGACCTGTGCGGCTGGTGGGGCGAGGGTGGGGAGGGGAGGT
GGCGGCTGGATCTGGACGGGGAGGGACGATACGGCGGCAGCGGCAGCGGCAGCGGCGGCG
GCGGGGGCAGGCGCGGGCGGGGGGACGGGGGGGGGGGGTAAAATATAGGAAGTAATAAGA
ACATGGACGGACAGTGGGAAGGGCGACGGGGGGTCG