Contig Data
morexGenes
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Map Locations of contig_274671 (2751 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_274671

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44398 1 287 bp MLOC_44398.1 Available Available None
MLOC_44397 1 753 bp MLOC_44397.1 Available Available LOC_Os12g07890.1, FRAME:-1, EVALUE:1e-11, 13112.m00827 protein expressed protein





CDS Structure of MLOC_44398






CDS Structure of MLOC_44397






Contig Sequence (2751 bp)

>contig_274671 2751 assembly3_WGSMorex_rbca.fasta
CGCGCGCGCTGCATTATAACGCGGCCGTTGGAGCCGCACTGGCGACCGCGCTAAACCAGC
CAAAACACGCGCGACAAACAGGTTTTTTTGCGCGCCGCGCGAAGCGCTGGAGATGCTCTT
AGGCCAGACAGCATACAGTAGCTATTAAGCCAGAGTTCAATTACCCTTGAGAATCCTACA
CCCAATGCTACCAGGCAGCGTATGTATTGCATCACAGGTAAGAGAGACAAGCAAAAAAAC
ACGAGTGTAGAGTAGCATATCCACCAGAAAGCTAAGCAAAGGCAAACATGTTACGTAATA
CTCCTTCGGTTTCTAAATATAAGTCTTTTTAAAGATTTTACTAGAACTACACGCGGAGCA
AACCTGCATTCTAAAATAATACATCCGTATCTAGTCCTTTAGTGGAACCTTTCAAAAGAC
TTGTATTTAGGAACGGAGGGAGTATGTAACAACGCACACAAAAGGGAGTATTGTTCCCTG
ATGGGCTGGACCAAACACTTGGTATACATAACCAACTTCCTTTTTGTATTTTTTTACCTG
TTTGCCATCTATGAGGCTCCGACAATGAACACATGTATAGACAATGGGCAGTCTCATAAA
GAGCAAAAGATCCAACAAATAGAAATAGAGGATTCTGGACTCGACAAGCACAACTTGATG
ACCATTATGGTTATTCAGTGTATTGCACTTACACAACTGGAGGGGAAGTCAAACACTAGA
ACAGCCTAACAGAATATTCATAGTAACAATATATTACATGCTTCAATTAACACAACTAGG
CAGCATATGTATAGCATCATGGGTAGTAAGGTAATTAAGCAAAAAGACCAGTCTTACACT
AGAATATCCAACAGAAAGCTAAGCAAAGGCAACCATGTTACATAGTGGTTCCTCCGTCAC
ACAATATTAGTAGTTCCTCCGTCACACAATATAAGACGTTTTGGCAAGCAGTTTGGGAGT
AATATACAGGTACTCTACGTAATAAGTATGCAAGGGACATGCATTTTAATATGATGAAGA
GAGAGCTTCCTCTAGTCATCTGTTTTGGCCATTCTTTTTCTTTTCTTTTTTCCTTTTTGC
AGTGTAGTTGCCCTTTCAAGGTATTTGGAGAAGGCAGTTGGAAGTTGGGGGGCATTAGGA
AACTTGTTAACGTGAGCTTTCATACCCACAGACTCACATGACTGCAGGTGTGCATTCTTC
ATGTCAAGCATGATCATCCACCCATTACCATGAAATTCCTCCTCCGTTAACAGGCAGCAC
AGAACATCGGGGTTATCCAAGCTGATGGTTGGGAACTCGGGAAGACGCTGATCTATGTGC
AGATTTCTGTAACCAGCTTGCGCCCAGAGAGAATCCAGGTTGATCACACGATGTAGCTTC
CACTCGAACTCGGGGTTCAACGTCCAAATGGTGATTTTCTGGGGAGTCTGCTGCTGCTGC
TGCCGCCCTTGCCTTTTTCTATCACGGAGCTCACGGCATCGGCAGCGACCATGGACTCTG
TCATGGAAGTCACTGTCAATTGGACAAAGCAGATCTTGCCTTGGCTGATGGACACACTTC
GGAATCTCTCCGGGAAGTACCTTTCAACACGTACCTTATCAGGGTACTCTTTTCCTCCAG
GGAAAGGCACGTAGCAGAGCGACGGGGAGTCTGTATTTTCGGAGAAGTCACATAGCAGGA
CACCGCTGAAGTAGTCGACCCAGCAGAGGAAACGGCCGTCGAAGGCGAGCACGTTGTGGG
TTGACCAGAGTCCGCGCAACTGGCCGCAATTGCCTGCTGGGTCCAATTTGCGGATGATTT
TCCACTTTCCAGTCTCGGAGTTGAAGACGCACAGTTCGGCACGCATGCGCTTCTTTTTGT
GGTAGACATTGAGGTCGGCGACGATGTAGCGGCCCCCTTCGAGCTGCAGGATGCCTAGTT
CTTCAGGAACGGCCTTCTACTGTACTCGACGTAGGGAGGGAGACGCTGCACCGAGGGGCG
AGGACCGCTGGCCTTTTAGACGAGCAGATCTGCCGGGGGCGCCCGGTAGCAACTCCGGCT
AGGGTTGGAGCTGTCGATGAGGACGAGTTTCTTGGCTTTTTTCTGCGGGTTGGAGACGTC
GAAGAGGACTAGGTTGTTGTCGGTTGCCCGGAGGAAGGAATAGGCGGACGGCGGGGTGCC
TGGTGTAAATGGAGGTTTCTCCGGCAAGTGGAGGTTGAGGCAGGAGATACCTTTTTGAGG
AGGCGCGAGGGTGAAGGACACGTAGCAGGAGGTGCCGCCGTCCATGTCGACTGCAGCGGC
GGTCTTGTTCTTGTCGACAGCGACACGAGCAGCGTCTAGGCTGTTGTGGCAGCGGGTGCT
GCCCTTGCGGTCCAGCACCACCCAATGGGGGACCTCCGGCGCGTCTCCGGTGTTCATGGC
GATCGGCATCGGGAATAAATTAAAGAAGCCGCCGCCCTAACCCTAACCCTATATTTTGGC
GGGGGAACTGATGGACGGGAAGGAAGGAAGGGCGACAGGCTCAACTTATACTAGCATAGA
AGGTGTGTCGATCTGGTTGGGCCAGAGATGCTAAAGAAGGGTGACAAACTAGCAAGCAGG
GCGGCTCGTTGGGCCAGACGAACCAAGTGGGCCGTCTCATTGGTCTCCCGTTCTACTTTC
TGCATCCAATGCAAACAGAGTTGTCTTAAAAAAAAAAAAACATGCAAAATGATACGGTAA
ATACTAACATTACACAAGTTCTGATTGTGGTCAATTCCCGGCTGACCCTAC