Contig Data
morexGenes
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Map Locations of contig_274596 (4306 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_274596

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44357 3 1060 bp MLOC_44357.2 Available Available LOC_Os01g49940.2, FRAME:-2, EVALUE:5e-151, 13101.m15061 protein ESP4, putative, expressed





CDS Structure of MLOC_44357






Contig Sequence (4306 bp)

>contig_274596 4306 assembly3_WGSMorex_rbca.fasta
CCATAGGCCAATATATATACATGTACAGGTGATGGACTATATGCAGGAAAACCCCTTATA
TATTGGGATAAATACAAAAGGGTACATGACTTGTATTATAACTCTAACAGCCTTGGCCTG
AAGAGGTCCATTACAAAGATGGAAAGTGTAAACTGGCAAGAAAGGATGGAAAGTGTAAAC
TGGCAAGAAAGGATTGTTTCTATTCTGTGGAACTAAACTATAATCAAATCATTGCACACA
ACATTAAGAGAAATGTAAGCTGCAAATATATACATCAACTAAGCAAAAAATAATAATAAT
TTATACTAAATACTGCAAAGATTGAGAAGTGGCAGTATGAAGGTGGTATAGGCAAGTAAA
AGTTCTAATTTCTACCAGTTACAATCGGATATTATTCACTGCGTCTAAATAAATTATCAG
AAGCATCAACATACCAAAGCTGGGAAAGCATCAAGTGCTTGAATAACTGTTCTCATAAAA
AGAAGAGGAATTGGTACATCGTCGACCTGCATGACAAGGTGAACAACTAAGCAAAAGGAA
TATACGTGGAAGTACTGCACAGGATAACAGTGGTCATGTATACCAGTTTATTCAGTGCCT
TCTCTAGAACTTGCTGAGTAAATACTGTACGCTGCTCAAAGCAAGCAGTACAAGCATCTA
TGACCTGAAATATGTTCATTTCCATCAGTGATCAATTAAATTGCAGTATAACAAATAAAC
TAACATTACACCGTCACAGATGCATCTGTATGTATTTGAGTACAAAATCTAGGCATTCAC
ATGATGTTTCCAACCATTTTTGGGACGGAGGGAGTATTTAACTCGAGAATTGAATTGATC
TTGTAAAGTCAGAAAGTGAACAAGGTACTCAAAAAGAAGCTTGTCTATTTGTGCACACCG
AGAATATGCTCAAGAAATGTTGAATATCATGAGACAGCATGAAAAGAAACAATAGGAAAC
AAAATTACCTTCTTTAGAGGAACTTTGTCCTTTTCTGGATTAATATCATGAATTGCAATC
AGAACTTCAGCAGGGGTTAACGCTGGACCAGTATGAGCAGATCCCTGTCGAAAGCAGCAT
TAGCCAAAACAAAGGTTGAGAAAACAACACATATCTCACTAAAAACATTTTAAAGAGTGC
CCTTTTAATAGGAAATCACATACATGGGTTGTTCCCATGTCAAAAAAATTACAACATCAA
CAACAGAAAGGCTGTGTTAGCTAAACAGAAACTGTTTCGCAGAAGCTATCACAGAAACAT
GAAGCAAATTCAACATCGATAAACATGCTCCCAAAATGAATAGGGCATATGTGGTGATGA
AGATCAGCACTGTGTATAATGCACCAATCTATTAAAACATTGACTTTGTAAAACTTGTGC
ATTTGTTTGCTTGCTTTGTGGTTTTCTCGCTTGTTGGTAAGGTTGCTCCACCCTGCATGC
TTGTGACAACAAATTGGCTTATAATTTCAAAATGAATAGGGCATATGTGGTGATGAAGAT
CAGCACTGTGTATAATGCGCCAATCTATTCAAACATTGACTTTGTATAACTTGTGCATTT
GTTTGCTTGCTTTGTGGTTTTTCTTGCTTGTTGGTAAGGTTGCTCCACCCTGCATGCTTG
TGCATTAAAATTAGGGGAAATTAAGATGAAGCGTATGAGAATTTTAAACAGATTTCATTG
CTGTCTGAACTTCAAATTTTGAAATCAAGAGGCAAGATGTATGCAGGCATTCCATATGAC
AAAAATTATTTACGGTGATTCCAAGATCAATTGTGACAGGTGGCAGCTATGCTAGTCACA
ACATATTCCAAAAAAGGCCTCTACCGAACCAACTTTTATGAAATGTCATCATATCCAAAT
GCAATACCCACTAGTGGAGTGGCTAATAAGCAAAGATGAAAAACCTGCAATATCCGAGCA
AGTGCATCTTGGAACCTGTCAGGTGGGAGATCAACTAGTCTCGGAAATATGGGCAGCACC
TGGGACCACAAAAAAACCAAGGCAATCAATAAATATGCTACTAAATGAAAATTAAAAAAA
AAATCCATGATCATGAAAAACATAGTGTGGAAGTGCAATGGATACAAAAAAGCATGTAGA
TAATAAACTATACTCACAAAAAAAGGACCACCCTACATGGCATCCTCTGAGAATTTCAAA
ATGACTTTATAACATGCATTTATTACCAGCTGCAAAATAATGTTTCATTCTCGAAACATG
TGAAACTCCAAAAAAAATCACTCTCATTTAAAGACGTTCCAAGTATTAAAATAAAATGGA
CTAAGTGATCACAGTTGGTGCTCCTGAATTAATGTATAGTTTACTGAGTCTGGATGAAGT
GTAAAAACTGCATACATATGAACCATTATGACCACAGCGACAAATAATTGCATCTTTTTT
TTCCAAAATTAATGTTACGCCTGGAATGTGCTTGTGTGTGCTGATTTTAGGTTATTAGTC
TCTAAATACCCAAATTCTGCCTTGTTAATTATATAACGTATCCCAATTAAGTTGCTGCCA
TGCCGAAGCAATGATTGGTCCAGATTGTGCAGAACATACAAGTTCTTACAAATCTTAGCA
TGCCAGTGCCGCATTTCTGCTTCTGAGCTAGTAAAGATCTAGACATCATAATACATATAA
AAAAACAGAATCAATACCTCTTCCTTCGGAAATGAGGATAGCAATGGAATGAGAATAGAT
GCATCCTGCCAGAGAAAAATACAAAATTCAGCGCTGCTCTACCAAAAGGGCACAAACCAG
AGTTTTGGAGGTAGTACGCAATGGAAGCAAAAGGTATACAGACCTTCAGCTTGGTCTCAT
ACAGATGTTTAACAGCCACGACCAGGTTGGCTGAAGGATTTGATTCTTCGGTCAGTGTTT
GCAGTATCTTTGAGAATAGAATGAAGGAAAACGCATAATCAACTTTTATGTTTCACAATA
ATGTACAAAGAGAAGTCAGAGATAAATTGTAATACCATAGTAACAAGTTCTTCACTGCCA
TCGGGTGGATTATGAATAATGTCCAGCATCTCAGGACATGATGATCCCAGATTTCTTACA
AGAGTGGGCATATGCCAATGGATACACTGCACAATTTTGTACCAAAATGTGCGGCAAGTA
ATTCAGTAGTCAATTTTTCAATACTTTAAACTTCACAACACAAGTTAAAAGTAAGACCTG
CTTAACAACTTTTGGAGACCCTCCATAAACATTGAACAGCTGTTGAAGTAGAGTGGGTCT
CTGGAACAAGGCAAAAAGATTTTAGTACCTCCCCAGACAAAATACACAAGACGCAATAAA
GTATGCTCATGAGGATACCTTTGTGCAAAGTGCAAAAAATAATGAAGTGTGGCGTTTGGC
CTCGGATACCGATATTACTGATTGTTTAGGTGAAACCAGAGAGGTCATAGTAGATCCACT
TTCAGAAGGTCCAGCATCCGAAATCTGGGAACCACTAACTGAAGCTTCCTGGCTGCTTAC
TTCAACCTGTTACATAAAAGCCATATACTATTCAAACATTCAGCCAAAATACAGTGCATA
GATCATATAAGACACTGTATCGCCCTCTGGAGAAGATGAGGGGGGTGTTACCTACCAAAC
TCGTCACATCTAGTTGTGGCCAAGTGTGAGAACTGAGAAGCCATACACTAACCGAAAAGC
TCAAGCTGATGAGTAAAGGTGAGCAATGCACTTCTACTTCAACACTCACCCTCAAGTGTG
GCTACCTCGGACCTAAACGTGGACCGAAGTGGACTGCAATTGCATGCACCAGCCAATTCA
CCCAGAAGCTCAAGCTGATGGGGAAAGGTAGGCAATGCACTTATAAGAGCATCTCTAGCA
GACCCCGTAAACTAGTCAAACCCGTAAAAAACGAGGTGTTTACAGTTTCGGTCGAAAAAA
CGGCGCGGAGCAGATCCCGTAAAACTTGTTCGACCCTTACACTTTTTAAGGGGCACGGTA
AATCCATCCGCGAAAACCTTATATGAACAGTTTCGAAGGCAATATACAGTTCAACCTGTA
AACTGGTCAAACCTCATCGGAGCGGACGCACCGCCGCGGAACTGGCCGAAATGTACCTGG
AACTCACCGGAATCCGTCGCCGCACGTCGGAAGAAGCCCCTGCACGCCGGAATTTGCCGC
CGCAGGCCCGAATTGCGGCCGGTTCGGCCTCCATCACCGAGGCGAGGCCAACCATGGGCA
GGGCGGAGCAGTCCACCGGCGGCCCGAATCAAGGCAGGGTGGCACCGAAGAAGAGCGAGG
CAAGGGTGGGGGAGCTCGCGCGGCCACGTCGGGGAACGCGCGTGCG