Contig Data
morexGenes
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Map Locations of contig_274579 (4060 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_274579

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44348 1 253 bp AK369058 Not available Available None
MLOC_44349 1 2704 bp MLOC_44349.1 Available Available LOC_Os02g22370.1, FRAME:-1, EVALUE:0.0, 13102.m02510 protein expressed protein





CDS Structure of MLOC_44348






CDS Structure of MLOC_44349






Contig Sequence (4060 bp)

>contig_274579 4060 assembly3_WGSMorex_rbca.fasta
CGGAGGGGGAGGGCGGGACGGTCTCGGTGCCTCGCAAGCGCTCCACCCGGCCGCTCTTGT
GGATGCGTATGAAACCGGGCATGTCGTACACGATCTCGGAGCTTGGGTCCATGACGGCGG
ACGGCGGACGGCGGCCTTTGGCTTCGCGGCGTAGTGAGAGAGCTTCCCAGGTTCTGTGAT
GGGTTATCGTAGCAGAGCTGCAGCTTGCTCGATGGGTTACGATATACTACTCCGTTTTGG
TGCACCGGTACCGATCAAACACGTCAGCTCGCAGTCTGGACGAACCATTTTATAAGGAGT
AATCACACCATCCGATAGTTATTTAATTTATCTGCAGATAAATCTTCTTTGCAGTGGTGG
ACTTTTGGTATCAATCACACCTTGCACTGAACAGGACAGCGCGGGCCAAGACAGCGAGCG
AAGCACAGCGGAAGGCTCCCTCGCCTCGCTTTCTCGCGACTCAACAAATATGCGTTTGGT
TCGCATCTCTGTTATAAGCATTTTGCATATTTGTTTTAATTAGGTTTGTCTAAGCAAATA
TAGGCTGAAAATAATATTTACATATAGTTTGGTTGTCTGCATTAAGCTTTCAAAGGCACG
AACTACATATTGTCAGTGCTAACCTTGAAGTATCGATATCACTTTGGGTACGTTCGAATC
TTATTAGCCGTCTGGCCGGTTGATGACATGATTATCTCTTCTTTGAGTTCCCCCAACATC
ATAGAGCACTTGCCTTAAGTAGCTGGAGATGGTCTTCATTTGTCTTCTGAAGGTGCTGTG
CGCAACCTAAACCTCTAGTTATGACCAATAACATAAAAAAAAATGGTTACTTGCTCTTCC
ACAGTGGTGTGGATGCTATCCTGTAGCAACCCTCTACTCCTAAAGGTATGCACAAGCCTG
ACAAATGATGCGCTTTTTAAAGGTTTGCACAAGCCTGACAAATGATGCGCTTTTTATTCC
AAGCATCCAATGATGAAAATGACCGTTTGATTTTGGGTTGTATGCAGCCTACCAAATGCG
TCAAGCTTCCAGAACAGCCGCAACGCAGCAATCCTCTCTCAATTTTCTTACAGCAATCCT
CCCTCAATTTCTTATACTCTGCAGGTCGGGGCAATTTGGATAACAAAACATATGTAAAAT
GTCACAGAAAAACATGAATCAAAGAGCTAAAATCCCAAATCTGACTTAATAAACCGACCA
GAGGAAGTAGTGATACTGTTGAATTCACTCCCTCTAGAATTATCTATTACTCCCTACGTT
CCTAAATATAAGTCATTTTGCTCAGTATGTAGTTCAAATTAATTTTTTTGAAAATATTTA
TATTTAAAAGCAGAGTGCTATTTTATAATAAATCAGCGATAATTAATATGGATCAGAGGG
AGCAAGAGTTAACTATTTTCTCAATCCATCACACTCCAATAGCCTGAAAGTGAAGATATG
GAAGAACCACACAACACCCGCAGCATAACAACTGGAACAACGAAATCAAAACAGGCACTT
GAATAAGAGGATAAATTCACCACAACACAAACACAAATGATGTATACACTAAATACATAA
GATCGGGCATTTTTTTTACTGCACACACCATCCCATGCATCCATATCATCACCTCTTGGC
GCCCTTCTCTTCAAACAGAATCGCACAACATCGGATGCAGCAGCATCCCTGATCCCTCTC
AGGAGCTGGTGGCAACTGGCATGCAACTTAACCAGCACAAGTCCAAAGGGTTCACCCCAG
TTGAACATAAGCCATCAAATCCTCTGGGCTGCACTTAAGCACTGAAGCTTTAGGCAGTGG
CTAAAGCATTACATATTGTACACTTAAAGCCTAATGCTCCATTAAAGCCGCATCAGTTTC
TGATAATGGTGCAAGCAAGTCCTCGTATGCGTACGTGTCGTGGAACAAGGAAGGCTCCAA
CATAGGTGGCGGGGAGAACACTTGATCAAGAGCATCATCCGTCATAAACGACCGACCATT
GACTGGATCAAAGAAGTTTGCAGCATTGCTTGGATCGTCATGGCCATTCAGTTTACCTGA
CAGAGCTGGGGCTGCAGGCATTGGGCTGTCAGGATTGAAGTAAAGGTCACCTGTGCTCTT
GGGCAATTTCGACTGTGATGACGGTAGACCTGTCCTTTGTTTTCTTCGATTTGCCACAGC
ACCCACATCCTTCCTTGAAGCAACTGTTGACAGGGGAATGAAAAAGTGCTCTGAACCATC
ATCGCTACTCTTGTCTTGTGGACCCTCCATGCTGCTCAATGGCTTTGACAGAGCGGCTTC
ACGAACAGAACGTCTGATGTCATGAGCAAAATAACCATCATTTTCGTGCGCTGAACCATT
TGCGTGATCTTTGGTTGAGGGGTGAATAAGTGCTTTCTCTTCCGGCATAATTTCTTTGCT
AGGTTGGCGTGTTAGGGCATTCCGCCTTTGTGTCTGTATTCCTTTTCCAGAAGAACTTGG
AGTCAGGCTAAATAAAGGAGGAAGCTTCAGAGCAGGACTGCTCCCAGCCTTGTCAATGTG
TATTGAAGAGAGCTTAGAAGTCATCTCTGAAACTTGGCTGCTGCTTTCTTCTGATCTTCC
GAGCACTGTATTTCGCACAGACAACTGTCTAGAGTTTGTTTGATCCATTGGATTACTCGG
TACACTATTCACTTCTTCTGAAAGTTCTGCTATTGACTGCTGCATTGCTGGAATAGCTTC
TTTGAGTTGGTTAATTAGACCCTGAATACTGACTAAATGCTGGCGATGTTCGGCCAACGT
TGCAGTTAATGAGTCAGCATGGCTACTAGTTTCGCCGTCAGACACACTGCGGAGTAATTC
TGGCCCCTCCCCATCATTTGCTTTGGCCAAATGAAGAGATTGTTTATGAATACGCTGCAA
AGCATGAGTCCAACGTCGAAGAATTTCAGCTACATCCACAGTTTGTTGGGCACGCCCATT
CCTATCATCTAATCTTGAAGAAACGGCTTCTTCCTTTCCCTGGAACAGAGATATCTGCTC
CTGCTTGTCCAAATTTAGAGAATGTGGAAGGCTTGAACCCATATCCATTGCTGCTAGCAA
CTGCGATCCAGATATACGGTACCTATGCTCACGATGTGCTATAAGATCTTCAATTGGCCC
GGAAGCTAAAACTTCATGCTGGCCTTGGCGAGCCAATATCGATTCCCACAAACGTGTCGC
CTTAGATACCAGATGTGAATTCTGTCCCGACGAGCTTGAGATGCGTTCATCCCACAGCTC
ACCCTCTAGCTTGGCTCTGTTTCTCATAGCTTGCAGCTTCTCTAACTCCTGCTGCAGACA
TGCCTCTTCAGCGCATAGACTTCGGAATTCAGCAGTCATTTCATGGGCTAAATTCGACCA
GGTTGCTTGCCTTTGAACAGCAATATTTGCATTCTCCAGAAATTTCCGCCTCTCCAGAGC
AATCCTTGCCTTGGTTACAGGAAGCAATGCGGCAGCATGAAGATAAGAGACATCTGTGAG
CGCTGCCGGCAGCGGATTTGATGCTGCATCAGCCGGAAACGTCCTCCTGTGGACCTCCCT
TAAGGCATGGACAGAGAGCTGCCACAAAAGCTCAACGAACCTCGGCCCGCAGCAGGTGGC
GAGGGACGAAACCCTGGAGTTGCTCCGCGGCAGCGCCCCCTGCTGCTCCAGCTCGCTGAT
GACGCCCTGCACGATCTTGCGGAACTCCCTCGACTGCGCGGAATCAAAGATGGGCCACAC
CTTGTCGAAGTCCTTGGCGGACTGCGCGGGGCCGCGGAGCGAGGACAGGAGGAAGTAGAG
GAGCTGCTCGCCGAGGCGAGGGTTGGAGTGGCGGAAGAGGCCGACGCGCGTGGGGACGGC
GCCGGCGGGGGAGCCGAGGACGGCGGGATCGAGGCCGAGGAGGAGGCAGTTGGTGTACAT
GGCGCCCTCCAGCTCCGCCTCCCGCTCCTTCTCCCGATCCGTCGACATGGCCGCCGGCTT
CTACTGGGTGGCTGGGTTGGGGCTAGGTTTGGGAGGAGCGGGAGGAGGCGGGCGGCATTG
GAGTCGGGAGATCTCGCGAGGGGGAGGGGGAGGGGGAGGG