Map Locations of contig_274532 (8011 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_274532

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44321 1 546 bp MLOC_44321.1 Available Available None
MLOC_44323 7 2416 bp AK248976.1 Available Available None
MLOC_44322 1 192 bp MLOC_44322.1 Available Available None





CDS Structure of MLOC_44321






CDS Structure of MLOC_44323






CDS Structure of MLOC_44322






Contig Sequence (8011 bp)

>contig_274532 8011 assembly3_WGSMorex_rbca.fasta
ATTCGCTGGCGTGCGACGGTAATTCAAGCCCCTGGGGACCTGAACAGCTGGAGATGCTCT
TAAATGGGAGCTGAGAAACGGGTTTTAGAGAGAGACAAGACAGGAATATGGGCAATAGAT
AAGAAAGCGGTGATTTGGCTCCCGAGCTCAGCTTCACCCGGGTCGACCAAAAAAATCAAA
ACAAATAGTAGAAAAATTCCAAAAAAAATACGTGATAGATAATTTGATGCGTGAGGTCTA
CTCTAAATTTTAACTTATTTGAACATCTAAACATCTCTTAACAAAAAAGACAAATCAGGA
TCTGTAAAAAAGTTAGCTGTTAACGAACTGTTCTGACTCGATTTGTCTTTTTTGCCGAGA
GCTGCTCAGATGTCTAAATAAGTTGAAGTTTAAAACAGACCTCACGCATCAAAATATCTA
CCACATAAAAAAAACTGTATTTTTTTTGAATATTTTTAGCATTTGTTTTGAAAAAAAAAT
CTGAACAGGAGCAGATGAGCCCGGACGCAGACTTGGATTTTCGAATAGATAAGCTCATCT
TATTTACACGGTTCTTTTCACTATATGTGTGCCTGGACAGCACAGAAGGACTAACTTGGA
ACAAAACCCCAACTCTACCGAAAAGGTATATACTCATGAAGGGCATGTGCACCGCATATT
TTTGTGAACGAAAAGGTAGGACACACTCTACCGAAAATTCGCTCTCTACCTTATATGTAC
ATCCCATTTAAAAGATTGGGTTGCATCATATTTTACTTTCGACAACTGGGAGCATCCGAT
GGTTGTCTTCGTACATCAGGCATTCAACGGACTCGGCCACTTGTACACAGTCCAATCCTC
TATTCTCAGTAGGTATGCCCTGCTTTCTTTTCCGTTTGTCTGATCAATCGAGGTTCATAT
TCTGATCTCCAGCTGAAGCAAAGCCTCGTGTGTGCTCGTTTTCAAATGTGGCAAGTCGAG
AATCTGATAGAACAGAGAACATCTGTGTTTCCACGAAGAGCTGGAAAACATATTGACTGC
TATAAGAATACGTGGGAACAACAATGACACACATATATACTCCCTCCGTCCTAAAATAAG
TGTCTCAACCTTAGTACAATTTTATACTAGAGGTAGTACAAAGTTGAGACACTTATTTTG
AGACGGAGGGAGTACAAGACTCTGTAAAACTCGATTGAAAAAAACCTTCATGAACGGTCG
ATCCTTCGAGGGGAAGGAATCAATAAAACTGTCCTTCAGAAGCAATGAAACCTGATCAGA
CAGAAAACCAGCATAATTTAGTGCATTTTTACAGTGTTTCCAGAAGGTAAAACATCGACG
CGACATCATGGTGCAAAGTGTAAACAGAAGTGTATATAATTCTAACCCTGTCATTATCTG
ACTGTACATTGGTGATGGTATGATAGCGCAATTCAGAACAAAGTGACTCCAAGTATGATC
TAAGAACATTTAAGAACTGCATAGATGCCTTAGCCTGCAATATCAGCCAAACAAGTACCA
TCTTTATCTTAAAAACTACTAATACGGAGTATAGACAAATCTGCTGTACATGAACAGGAT
CTGAAGGAGGTAAAACTTTCTTCTAGATGAAGAAATGATGGCTTCCAAAGAGGATGGAGC
CGCATTCCACATAGTAAACAAAATTAATACCTGAACTTCGTTGCATTTATACATAGGATG
TTTCTTGGCCAAAGCATCCTCACATGAAAGTCTAGAATGAATTGGACTGAGATCAGAAAC
GAGGTCCTTGTAACGTGGAAGTTGAGGCAATAAATTTGCCTTGACCTGCATTATTTATTA
ATAAATAAAAACTAATGTTCAGTACGAATGAATCTTTTCTGTCATTACAGCACCAAATAT
GCTCGCACAAGTGTACATGGTGTGATAATATCTACTCATGAATGCTACTTCATACAAGTA
AAATACTGCAAATCAGACATGATCAGATCAGGAGGTACGTGTTGTCATTACAGACGTCGA
ATATTTAGACTAGGTAGTTTATTCCCCTAGATTGGACCATGCTCATATAGTAACAAACAG
AAAAAGATAGCCTTCGTAGTTCTTGTTTATGCTGGACTCTGAACACTTTCCTAGGGCTCA
CAGGTTCATGTGATAGCCTACTGATGTAGACCATGTTCTCTTGAACACTTTCCTAGGGCT
CACAGGTTCATGTGTGAACATATCAACAATACAAAAGAAAAAACGAAAACAAAGATTCCA
TTTGTTACAACAAAAGAAAGGTTCAGACATCCTTTTCCAAGACAGTTTTAATATCAGGAA
AGAACATTTCACACTTGCCTGATCTTTCTGTACGTTGATTCTGACAAGACTAGACGCTTT
CATCTTGATATCAGGGGGTTTGTGTTGGATACCAGCCTGTAGAAGAGAACATACAATCCC
TGAAAGTTTAGCTAATAGTGACTACCTATCATATCATTGGTTCAAGATTGCCAACATGCA
GAAATTGGCAATTGCAGTAACTGGTAGTTCTTTGAAATAGCAGCAACCCAATAAATGAGT
TTCAAAGAAAAGTCAAACTTACAATGAAAGGGACAGGGGCATCAATGAAATCAATCAATT
TTCTTGGTAGAACCTGCAAAGCAAATGTTTGTGCCTTAGAACAGAGTACTGTTGGGAGAC
ATGTATGAGCTAAAGATCTATCACTCTTTTAGTTGAACATAATCTCAACAAGTATGTATA
TGTTCCGGTAAAACATATAAATATGGTTGGGTAACATGCGCAAATACACAGAACAATCCA
GCATATTTTACTGAATTTGGTGAACATGCGAACCGACTCTTTTGAACCATTAATAAGATG
CAACAAAGATGAGCAGAAGAATAGACAAAACTGAGCAAAATGCAGAACAAAGCAGATGAA
AACCCATGCTCCCACAGGTCCACCCCCAAAAAAACCGATATACTAACATGGTATTAGTGT
ATTACTAAAATCAAAACAGGATAGAAACTTCAACAGCTACAGGATACAATATACTCCCTC
CATTCCTGTATGTAAGGTGTATTATTTTCAGCACGGTGAGCAAGGCACATAAATATAGAC
AATTTAGGATGAAATTACCCTTGTCTAATTATTTGATTATTGGCAAGTAAATCATTTAGA
CTAGGAAAGGAAGAGATACATGCAATCGAGAGAGAGAGATTTTTCTTTTTTTCCTCTACA
AGGAGATATTCATGCAATCAGGGGAGATATACTTTACTTTTTCTGGAGGGCTAAGAAGGG
AATTAAGGGGAAATAGAAGAAATACACCTTATATTGTGAAATTTTATAAAAAACAAATAC
ACCTTACATAAAGGAACGGAGGGAGTAACTTACAGGAAGCAGTAAACTTTGCCACTGGAA
TGGCCTTATCATTGGTATAATTGACAAAACAATTGCTGACAGTACTCCCTGCAGTTAAGC
ATTCGAGAGAGCTGCTAGAATCAGCAGGATCAAGTATAGCATTAAACCAGAACACATTAT
CACAAAACTCAGGTACTTGAAAGAACATACCAGATTTGGGCATATTACCACAATTTGCTT
CTCCAACAGAACTCCAGTGAATAATGCTAGCATCTGCAGGGGAAAGAAACAACTTTACAT
ACACAAAGCCAACCATGATGGCAACCAATCACTTATATAATGTCTCGGTAGTTATTACAG
GCCTCAGAAAAGAAAAGAAAAAGGGAAAGAAGTAAGTCTCGCTGCAATCCTCCTACTCCC
TCCGATCCATACTTGTCGCTAAAACAGAGAATCTAGCATTGAAATGCGTCTAGATACATC
CGTTTGAGCGACAAGTAATATGAATTGGAGGGAGTAGCAAATTTCCCAGATGCATGATAC
TCCCTCTGGTACAGAGGGAGTAAAAAGTACTCCCTTTGTTCCGTGATATAAGGTGTATAG
ATTTTTGAGAAAAAATCCAAAATATAAGGTGTATTGCATTGCACCACTCGTTTGGATATT
TGTTTTGGGGATTTGATTACATTTCCTTATATCAGGTAAGCTCGTCTATTTTCTGATGTT
AATTAGTGAGGTGTAATCTCATCCAAGAATTGTGAAATTTTCCCTCTACGTGCGTTCTTT
AATTTCCGTGTCAAAAATTAATGGTAAGTTCCATTAGTTTGTAATACAAAGTTACAAACT
AATGGAACTCCTTAACTGAACCAAAAAAGAGTAAAGCAACATACACTTTCCAGAGATAAA
GCACGACAAACTGTAGCCATAGTCCATATTGATAATGCAAGAGCTTCTTCTGCAGCGACC
AAACGGGCATTCACAATTACCTAAACAAAATTGATGATTAGTGAAGGGACAAGGTGCTAC
AGCTAGTGCCGTAAAAAGTCAATTATCTACCAGATTTGTTTCTGCCGAATTCAAATCATT
GTCCAAATTTGAGTCTCCTAACCCCAATGATGATAATCCAGGCCGGGAGTATTTAACAGG
CTGGAGATGTTCAAGGGGTTGGAAGACAATTTCTCCTCCGTGAGGTGGCAGAGGAAGAGT
ATGGTAACCACAAACAATTTGTAGAGGTTCATTATTGTGTGCCTAAAATATGAATGATCA
GTATGGACAAGAGCCATCAGATGGAATTCTTCGAACTTGATATTACAGACAAACCTTAGC
CCATCCCAGAACTTTGCCATCATCAACACCACTTTCATTCTTCACATTTACTTCATCGTC
TTCTTCATCTGACCCAGCACCTTTGACTGAACTGTCACAAACCATAAGAATGCTTAATTA
ATAAGGTAAATGGTGTTATAATACTAGACGTATCATAGTTCACAATGTTCTATGCATTCC
AACATCATCATCAATAAGATACTAAAACAGATTACTTGGAATTTCAGATAAATCCTAGCA
GATGTGATCGACGCCATAAATTGCACTCCACAGTTGCAGGAATTATTTTTCAAATTATCA
GGGTTACCTGTGTAAAGACTCCATACTCGGTGTGCGTTCTAATCTTGTAGAGGTAGCAGA
ATGCATGGACAGAAGATCTGGGGAAGTTTGTCCATTCTCATAAGTACTACTTGCTCTTCC
AAAGCTATCACAGCGGGATTCCATGTTCTGTGATATACAGTCTTCGTATTGTTGGAAACT
ATGTCTTCCTTCCTTCTCAGGTTCTTTAGCATAACTAGAATCTGAAGTCTCACTAGCCGA
TATACTTTCAGGAGAATTAGGTTCCCAATTCCTGAACAAATATGAAGGGGCGTCTCTTTC
TGATGTAAGTCCTGGTGAAGAAACAAGACCTGATATACTGTTGACGGGTACAGCATATTC
TGTCCAGTCATTGTACGAAAGCCCATTTGGAGATTCAAAATCCCCATCTGATTGATCTTG
TAACTGCTCTCTCAAGGAACGGGGGACTGGCCCTGCCAGAGCAATTTCACTGGCAAACTG
TGTTATCCTTTCAAGCCTCTCCTGTGAAATTATGCTGTTCACATAATTGACAGCCGAAAA
ACAGATCATATCTTAGTACTGAATTGGGGAGATACAAAACTAGGAATGTTACGCATGGTT
ATTAGCTCAGACAAATGGAAGTATATACCCTGGACAAACCTGTTTAACATCTCATAATGT
AGCTCAAAAAAAGGTACTCTTGTAAGTAAACAGTAACAACGTGGTGCAGAAACCAAGAAA
CGGCTTGGCTTGTAGGAAGTCTGATTTAGGGGTGAGACTGCTCCTAGTATACCAGGGGCC
CTTTGAACAATTTCCTGGACATGAAGGCAAACACCATATAGTGGTGCATTGTCTGATACC
TGGTGTCATCAACAACAATTAATAAGAAAAGAGTAATCGAGAATGCCTGAATACAATCAT
CCAGGAATATCAAAATTTTAAATCAATAAACAAACAAACCTTTAGGAAGAAGATAAAGGA
CAAATCATCTCGGCACAGATGTTCCTATGTAAAAGATGTCATACAAGTTAGCAGGTTTGA
TTCAAAAGAAAGCCTCCATTCAGTATGAAAACTGGAAAACTCAAGTTGGAATCTGATGTG
CAAGGGACTATGGGAGATGAAGTTGAAAAGTATAAACAAACACTGGTCTACACTTTACAC
AAGAGTATCATGTTCTCAACGAAAACAAGGTTAGCAGATTATTCATTGACCCTACCACAG
ATGGACGGTAAAAGAAAAAAACTGCCAATATAAGGAGGTTTCCCAAATCCTGCTAAAACT
AATTTTCACCTGCCCAAATATCACTTCATTTAGATCACTCATGGAAGGAGTCCTCTCAAC
TAAGCGAGCCTGAAATTTTGAATTAAACCAGAATCAAAAAAATTGCAGTACAGCATATCT
AAAAAGGATTAAAACGGATAGAGAAGGGAAAGAACTTTCTTAAAGAAGCAAATAGGAGCA
ATACAAATTCAGCAAGAACATTATTTATCTAACCTTTACGCCTTCAGGAAAACAGAATGA
GGGTAAATCAGCCTCTCGAATTTCCTCTTTCTTTCCAGGTGGATATTTGAAAAGAATCTG
CAAGTGGAAAAAGGTAAAAGGTAGATCAGACATGATTTATCTGAACAGGCAAGTGAATCT
ACAATCTAGAGGCCAAACTCCTAGAGAAATCAGGATAAAAGTTTGCTGTCTGTCCCAGTG
TAAACTAGGGAATTTAAGTTTCCAGAGCTTAGCTATCAAGGCTTCACAAGATGGAAACTA
GTATTCTGCCAACAAACAAGGCTTACAAGATGATGACAGAGACACTGAAAGTACATGTGC
TGACCTTCATATGAACTTGAAATAAAATTTGTGATAAGGAGAAATCCAGGTTATCACTCT
GGGATTATGTTCAGATGATCTGAAATTTCATCCAGACCATGATTCTCATTCCTATGAAAA
GAATTAACTACAAGTATGCACAGTCACACAGGCACAACAGTTCGGCACTCAATTGAGAAC
ACGCAGTTGTTGATCCTCTCTCCCAACCCAAAAATAATAGCCACCGACCATTGATCCAAA
GAGCAATTTACTCTAAACAAAATGCCCACAAGCTGCATCCATTAAAAAAAAGGTAGTACA
TTCAGTTCCTTTAAAGAACGGTTCTTGCGTGCTTTTAGGTATTACCATGCTGCAGACAGA
TAGGGGTGCTCTATGAGCCTTTTCATGCTAAGGGAAACATATAGTAACATGAATCCACAA
AAAGAACTAGCTATGGTAAAAAACTTTGCATGCATTATCAATAAATACAGTTACAATTGA
TTACTGCCCGGACCTTGGAGATAACTAGTACTCCCTCCGTCCGGAAATACTTTTCCTAGA
ATTGGATGTATCTAGACTTATTTTAGTTATAGATACAATCATTTTATTCATTTCTAAGAC
AAATATTTCCGGACGGAGGGAGTATGTATCCTTTGTTGTGCTGTGAGTAATAAACTTATG
GATGGATGAACGGTGTCCTTGAAAATATGCAACTATGACATGATCCAGATCAAAAACCTC
TCTTAATGTTAAGTATGTCCTAATCAACTCGCCAAAGTTATGCACTACATTTTAGCATAA
CAGGTAATGTACAGAAAACCAGAAGATAAATAAGACGATAGATAACTACAACGAATCATC
TAGAGAAGACGAGTGTATTCTCAGCTAAACTTTTATTTCACAAATAACATTTGCGAAATA
GACAGGGCTTTAATAGACAATTTCCCCTAAAGCAGAAGAACGCCTAGTCAACAAAGCATC
CCACCTGTGGTTCCATGGTTGGTATTGGTCCATGGTACTGAATTTTACTAAGATCAACAA
CCTCTGAACATGCCACATTAGACTCCCAAGCTTTCTTTTTTGCAAAAGCATCCTCAATTA
CTGCAACATTTGCATAAGAATGGAGTCCAACTACGAAAAAATGTTCAAAGAGCGATGATG
GTTCCTTAAACTGATTCTGATCCTGCAAGAGACATAAAAAATAGCTTTAAAAAAGGAAAG
TTCAGCTAAGTACAGATAAAAACTGCAAGAGAAACTAAAGGAGCAGGTGAACGTATCTAA
GTCTCAAAGCTATCTCTATAAACTTAAAATT