Contig Data
morexGenes
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Map Locations of contig_274498 (2269 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_274498

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44301 1 1015 bp MLOC_44301.1 Available Available LOC_Os01g47570.1, FRAME:+2, EVALUE:2e-20, 13101.m04919 protein expressed protein





CDS Structure of MLOC_44301






Contig Sequence (2269 bp)

>contig_274498 2269 assembly3_WGSMorex_rbca.fasta
ATGGTTCGTGATCGAGGCGAGATCTGACGGACGAGCAGACGGCGGATGGATCAACCCGAT
CGGCCAATCTTTTCCCTTATTATTAAGGAGAGAAGAGATTACGCGCGCCGGCGAGGACAA
ACGGCAGAAGCAACAACCACACATCTGGGGCGACGGCTCCCATCCCAATCCTTGATCGGC
TAGTTGACTAACGGTTATCGTCGCTCGAGGCTACCGAACCACTGCACTTTCTTTTGACCA
AACGACCCGCTGCCCGACAACAGGCAAATTTTTGCAAGCCGTTGGTGAGCAAAAGAAAAC
AAAAAGGCTGTCAGGGTAGCGTGTAATGTAGGCCTGCAGTGCACTTCACGCCCGGCTGTC
ACGGCCAGTTCGACTCCAGCAGCACTCGAGAGTCGAGAACCATATACTCCTACCACCACC
CTGGATGACCTGCCGGCCTTTTCAGTTCAGATAAGCCCTGCCCCTGCCCTGGCGTTCTAG
AAAGTCCATGCACTTTGTTCAAATTCGCCATGTTTTGCAACTTGACAGCATAATAAACAC
AATCTCATATTTTGTACATATACGTTACAGCATGCGCTGAGCAATAAACGGATCAGCGTG
ACACATACACAACTCCCCAGCCGAGCTTGCGGTTGCAAATAAAATCGGCAACGGCCTTTA
CAGCACAAGCTGAGCTGTCAACTAGTAGTACGTCTAATTTCGAAAAAACAAAACAAGAAA
AAAAAAACTAGTAGTATGACTGGCGGATGCCTTACGCACAAAGCAGCAGCTCAAACCACA
ATCTCCATCTCCTTTCCTTTGAAAAAGCGCTGCTAGGTAGGTTTCGGCGCGTCCCGGGAC
CGAAACGGTCTCCTTTATATCCTCCATCTCCGCCTGACCACGCCCCGCACGTCTTCCCCC
ACGTCTCCGCCCCGTCCCGTCCAACCACGTACCATCTTGAGTCCTCCTCATTCACCCAGG
CGCTAGGTCTTGTCCCAGTCTGCGATGGCCATGATGGGCATCGTCAAGGCCGACATAGCG
CCGGAGACGGCGTACGAGACGGAGCCCATGTCTCCGGCTGCGACCAGCTCCGCCGCGGGC
GCGCGGCACCGCAGGGGTTTGCTCCGGAGGATGATGACGCGGGGGCACTACTCGCCCGTC
GGCGCCGAGCACGGAAGGGCGCCCGCGGCCGCACCGATCGCTGCCCATGGTTCGGAGGTC
GCGGAGAAGCCGCGGCGAGGCTGGCTGCGGCGGCTGATACCGCAGGACGGGGTGCTGCAG
CGGCGGCGCTGGAAGAACCTCGGCGGCGCCAGCGCGTCGAGGCTGGCCGGACTGTCGCGA
TCGCTGCGGTGGAAGCGGCTGTCCGTGAACCTGAGGGGCAGCTGGGCGTCGGCGCTGCTT
GACACCGTCGCGTTCCGCGTCATGTACGTGGTGGAGGCCATCGTGCTCGGCCTGGCGCTT
TCCTGCTTCTTCTGCTGCTGCGGCTGCCAGATATAGCTGGCCATGGCCTATTGGCCTGCA
TGCCCCTTGCTGTGATTCATGCAAGCTCCTTCCTGTCTGCTGCTTGCCATTGGGCGTGTA
ATCTTGTACCCCCGGTCCTTTGATTTTCTTCTGTCCTTTATTTTATCTCTTAAATTAAGA
TGCTTAGTTCTGTTGTTGATCATCGATGGTCGATCGAGTTGGACTCAGTTGCATGTTGGT
ATGCAACAGAAGTTACTCCTTCCGTACTCGAAATAGACTTCCGCCCCGCCATATGGATAT
AGCAACCAATCGATATAACCACATTCCGATCAACGATTGAGCTAACAACACAAGCACGTT
CAAAAGAAAATACAATAGAAAATAAGAAGAAAAAAATGCCAATAACGCCGGATGGGACCG
ACAGCATCGCAGCACCGAGGGAGGGAACAACGTCCACCGGCTTAGGCGGAAGCAGACGAG
GCATAGCAGCAGAGACACACCAGACCAAATGTCCGTCCGAGCCCAGAACGGGCCCATGAA
GCTCCGCCGCCAAGCTGCAGTAGCCGCCGTCCCAGTCGCGAGGAGCTCGCTAGAACCACC
GAAGAACAACCCACCGCAGCCCCCCAGTAGGCCCGCCACAACCCAGATCAGGCCCATAGG
GCCTAGATCTGAGCCGGCCGCCGCAAGTCATGGGCCGTCACCGCTACCAAGGGCAACGCC
TCTGCACCGCCGCCGTCCAGATCCGTGCCGGAACTCCATCGGCCGAAGGGCTCCGCTGCC
AGGACCACTCACTCGAGCCGGGGTCCAGCCACGGGGGAAGAAGGGGACT