Contig Data
morexGenes
Links



Map Locations of contig_274490 (4166 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_274490

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44295 2 1370 bp AK372646 Available Available None





CDS Structure of MLOC_44295






Contig Sequence (4166 bp)

>contig_274490 4166 assembly3_WGSMorex_rbca.fasta
TAGTCATATTTTAGGATGTAGATTTACTCATTTTGCTCCGTATCTAGTCTATAGTAAAAT
CTCTAAAAGGTCTTATATTAAGGAACGGAGGGAGTAGTATTTACTAGTACTAATTGTATT
GTATCCGTCTGAGCTGACATTTGTTTTGTTACATGCATTTACAGGGAGAAAGTACAGTGT
TCCTGGTATGGTCCTTATGGTTGTGCTGCCAAGTCTAGCAGCCGCAAACTTTATCGCCGG
CTTATTTATCTGGAGGAGGAGGCGGCGGTCACCAGCACAAGCAAATCAACCATGTATATA
TATCCTACAAAATTCTCCAATTTACACTATAAACTTGCGCTCAAACATGCAAACTGACAA
TGCACTTGTTTTTATTTCATAGATCCCAGTTACTCCACGGAAGGTAAGGACACTGAGAGT
GTAGACTCGATGCTGATGGACATTTCAACTCTGCGAGCTGCCACTGGGGACTTCGCGGAA
AGCAACAAGCTTGGCCAAGGAGGCTTTGGTGCGGTGTACAAGGTGTCGATCTTGACAACA
CTGCTAGATTTCTTTTGCAGCTGAGCAGAACTTATCTTTCGCCCATTTTTGACGCACAGG
GTACTCTACCAGATGGCGAAGAGATAGCGGTGAAGAGATTATCCAAGAGCTCGACGCAGG
GGGTGGAGGAGCTCAAGAACGAGCTCGCCCTCGTCGCAAAGCTCAAGCACAAGAATCTCG
TCAGGCTTGTCGGTGTGTGCCTGGAGCAGCAGGAGCGACTGCTCGTCTACGAGTTCGTCC
CCAACCGGAGCCTCGACCAGATCCTATTCGGTAACGTTTTGGCTTGCTACCTATGATCAG
AAACTCTTAATTCCAACTCAGGTACTTTCTGAACTTGCAAGTGTTTAGCAGACACTGAGA
AAGGGGAGCAGCTTGACTGGGGAATGAGGCACAGGATCATACGCGGGATCGCTCGAGGCC
TGCAGTACCTCCACGAAGACTCCCAGCTCAAGGTCGTCCATCGTGATCTCAAAGCCAGCA
ACGTCCTTCTTGACGCGGACATGAACCCGAAGATCTCGGACTTTGGCCTCGCGAGGCTCT
TCGGGAGAGGCCAGACGCAGGGCGTCACCAACCGTGTCATTGGCACATAGTAAGTACTAG
TACGAGTACCAATCTAGTCCATGATTCTCTTTTCTACTAGCTAAATTGTTTGTGGCGCTT
ATGAGTCACATCGGAACATGTTGTGTTGTAATCATGTTGCATTCTATGTTGTGCTATTTC
AGCGGATACATGGCGCCGGAGTACTTGATGCGCGGGAACTACTCCGTGAAATCGGATGTG
TTCAGCTTCGGGGTAATGGTTCTGGAGATCGTTACAGGAAGGAAGAACAGTGACACTTTG
CAATCTCAAGATCTCTTGACCATGGTATGCATCATGCATGTTGTGATACATCGGTACTAC
TCCCTTCGTTTCTAAATATAAATATTTTTAGAGACTTCACTAGGGGACTTACATACGGAG
TAAAATGAGTGAATCTATACTCTAAAATACGTTTATATACATCTGTATGTAGTTTTGTAG
TGAAACCTTTAAAAAAACTTATATTTATGAACGAAGTGAGTATATATATAGACATTTGCC
ACACATGTCTAAACTGTTGCAAAATAAATAAATTGTGCGTCCAGGTCTGGGAGCATTGGT
CGGACCGAACGGTGTTGGAGATGATGGACCCGTGTATGAACAATGGCTTCTTAGAGAGCG
ACGCGAGGAGGTGCGTCCAGATAGGGCTGTTGTGCGTCCAGGAGAACCCGGTGGATAGGC
CGATGATGTCTGCGGTGGGCATGATGCTTGGAAGCGACACGGTGTCTCTCGGTGCCCCGT
CAAAGCCAACGTCTACATTTTACACTAGGAACGCTAGTGCCGACTCTGGAAATGGGTTCA
ATGTCTCGACTATTTCAGTGAATGATGGCCCCAAGGATCATTCTACTACGACTTAACTAT
AGTATTGTCCATCTTTCTTTAGGAGTTTCATCTTTTGGATTAGTTAGTTGGTTGTACATC
TAAAATTCAACATATACTATCTTTTGATTGCGAAACACAAACACAAGGTACCTCGAGTTC
ACCGGCTAAGGGTGTCTCTAATCCATAGACAGAGCCTCAATCCGGAAAAGCTAGCAAAAA
TCTTAAATCCCAAAGAATTCGTTCTATTGAGAGGTTGTTTCTAATCAACGGCCAATACTT
GAACCAAAGAACACATATTTGAGTTGTGTCCCGCTTTGTGCATGGACATGAATATCCACT
TCATCTTCAACATATACTACATTTATTAAACTTTGTTTTGGCACTAAATAGAACTACCAT
GTTTCATAATTTGAGCTACGGGTCAAACACAGGCCAGACAAAAGAAACTCCATACCATAA
ACATTACTAATTAACATTAGTTAATCAAAAATATTAAGTATAACTATGAACAAACCCTTA
GTTTTTCTATGTCACCTAGGCCTCCTCCTCGTCATCGGATGAGATGACGATGACATATTT
GATTGCTGCTATAGGGCAACTACTCCCGTGTTGTCGAAGACTTCTCACCAAATTGACAAT
CAGCTTATTTGCTCTTTGAATATTTTCTAGCACGCCTCTCATTTTTCTACTGTATAAACC
ACAATACACATTCTCAGTTGTGAAATCAGTTTTCAAAATATTTGAAATAAGTTTTTTTGC
CCTGAATGAAATCAATTTTCTAAATGAGTGAAATCAGTTTTTCGCACTGATTGAAATCAA
TTTCGAATTGAAATATGAAACTGAGTGAAATTTGTTTTCACAACTTAGTGAAAATATTTT
TCTGAAATGAGTGACATCCATTTTTTTGGATGAGTGAAAATATTTTTTTTAACATAGTGA
AATGAGTGAAATCCGTTTTACGAATTAAAAACAAATGGAATATGTTTATGTGTGAAACTG
GTTATTTAAAATATATAAAATACATGAACTCAATGAAATCTGCGTTAAAAAAATAAGTGA
AATCAGATTATCTAAAATACGTGAACTAGGTATTTTTGTAATGAGTGCATGTAGAGAGAC
AGTGCATGTGGCGTGCCAGTCGTCTTCCCAGCATATAGAATTGGGGTGGGGGTGCATTTT
ACGAGTTATACGCGGAAAGACACCACGGATCTTAACGACAAGAGCGAACGATGTATCAAG
CACCGATACATTTAGGCTCTGGTAAAAAAAAAATCACTCAGGTACGACCATATGCAATCG
CTATGATCTTACGACGAGTTACAACTATGTGTACAAAAGAGGGTTTTTAACCATGTGTAT
GCTAGCTAACTCGATTTGCACTAGTAAAATAGAAATTTCATTTGACTATGAATTGAACGG
CATATTTTTTGTCAGTCCTCCTAAATCTAGTCGGCTGAGGCTTGCTTATGTATTAGTCGA
TGCTATTTCATGGATGCTATATTTATAAGATCTTACATTAAAATGACGATTGAAGGTGAC
ACACAAGCCTTACAAACTGAATGTTAGGTCGTACTCCTTAGGTCTTAAAATAGATGATTT
AATTTTATACTAACTTTAATATATAAGGAATATCAATTTTCAAAACATTCTTACGTACAT
GGTAAAATGGTTGGTCTCGCTTGCCTCCCTTTTGCCGGACGGTCACCCAAATGTTGATAC
TGCAAGACAGTGACGAGGCCCACCAACAGTAAAGCATATTTGCAACCCTGAACAGAAGCA
GGTTGCGCACGAAAGCACCGACGACTGGATATTGCTGCCTGATAACGACGCCGTGACGTC
CTCTCAAGCCACCCTACCGCCACAGGTACTTCCACAGTGTGCTCAACGGCACCCGAGGGC
TCACCAAATACGAGACCACGCCTAACATGAGGAAGAGGGAATAGTTTACGACGTAGAAGC
TGATGTCGACTGCCCTCGTGCTCGTGACGGCTTCTAGAGCCGCGTAGAATGCCATGACCA
TGCTGATCAGGGACAACCACAGGCAGTGCAGCGCTGCCGTGAAGGTTTTCCACGACCCGG
CGGAGCGCGACGCCTTGCCGTAGACGAGCAGCACGACGGCGAGCACGGAGGTTACCAGGG
CGAAGCTGTCCAGGACAAGGAAGCATTTGAAGACGGGCTTCTTCTCAAGGACCGCCATCT
CTTTTGTGTTCCCCTCTGCCTGCTCG