Map Locations of contig_274455 (4540 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_274455

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44280 1 297 bp None Available Available None





CDS Structure of MLOC_44280






Contig Sequence (4540 bp)

>contig_274455 4540 assembly3_WGSMorex_rbca.fasta
GCCAAGGTGGAGGAGGTGAAGGCCGGCCTGGAGAACGGCGTGCTCACCGTCACCGTGCCC
AAGGCCGAGGTCAAGAAGCCCGAGGTGAAGGCCATCGAGATCTCCGGCTGAGTATTGGGG
TAAGAGGTCTCCAGTTTGGTTGATGTGTGTGTGAGCTCTGCAGCCTAAATACAGTTGTGT
CTTTCTTCTTGTCGAGTCTGGTTGAGACATGTCTGTATCGCGTTTTTTTTCCTCGGTCCT
TTGTGTACTTGTGTAATCGCAATGAATAAATAAGATATAAACCGTTATGAATTTGGGTGC
AGTGCAGAATCTGCACATACAAAATCTGAACTTTTTTACACTCATGGTTTGGGTTGGGTC
AATAACTCCTGTGCGATACCTTACCTTTGAGGTGAATTAGAATGAGTTAGACGTCTTTCG
GAAATGGATCAGACACGACATAATCACTAATTTGAACTGATGTCCTCAGTTAGGGGCTGG
ACCATAACTTATCCACGTAAGCGTTGGCCGTATTTGCCAGTGCGTCTAGTTATGGGCTTC
ACTTGTCAATGCATCAGGTAAAACGTGTCCTTGTACCTGTCCGAAAGGGTATCCCTGTCT
GAACCTGTGTTGCTCCCTCCTCTTCGTTTCCACCGCCGGCGACGACGGTGGAACTTTTGT
TCTGGGTGACAGCAGCGGCGGACCTTTCGTTCTTGATGACGACGTCAGCCGCGTTTTTGA
TGACGACGTCGGCTGTGATGAGTGAATCCGGAACCCTGTCTTGTTCTCCTCCATGTCGAG
TTTGATTTAGAGTTCGGACCAGTCCGCCTTAAACCCGTCCGTTAAATATGAGATCTTCTC
CTTGCGCTCTCCATCTTAGGCTTCATTTGGATTGTTGATTTAACCGTGAATACCTCCGCT
CTCCACCTTAGGCTTCGTTTGGATTGTTGTTTTAACCGTGAATACCTCCGTAAAAAATTT
ACAGGGCGTCGTTTCTTTTCCGGACGAAAGTCAAGCTGCGGACGGTATCATACACGCGTA
AACTAAATACGGACGTAAAATATTACACCGATTTCAAACAGGCTCTTGAGATAAAATAAT
TTTCCTTGTAATGTATTCACGTAGATGTTCATGGCTGTGGAGGACGAGGAGGAGGGTGGC
CTCGCTGTGGATGTCGACGCTTGCTAGGGTGTTGCTGCTGTTCTTGTCGATCGACCTGTC
TGTTGGCGAAGATGAGGCACTGCTGGTCCTTGGGAAAGCCGTTCCTGTCGATGGTACCTG
AGCTCGTGACCACAAGGTTTATGGCCCTGCCGGTTAGTCTCTCGACCGCACCGCATGGAT
CTGCATCTTTCTCATGGTGGGCAGACGTTGAGTGCGGATCCGTTACGGACGCCGTAGTAG
GGCAGAGTATGGCCGTCTACAGTTCTCGACGCCTAGGCGTACGTGTTTAATTTAGTTGCA
AATCGAAACAGGTTATCTTGGTGAGTCCAGCGCGGAGTCGCATCAATACCAAACGCATCG
TCCCTAGTCCAATCGCCGCCGCTGCTGCCGCCCGCCCGCCTTACGTCCCGGGCACCGTCA
TGTCAGACCACCCTGCCGCCGCGCCCGCGTCTTGGCGCTCGGCCCATCGACCATGGTCAC
TCATCGACTCAAAGTGCCTCATCGGCGACCTAGACAACGCGACCACCGCCCACGCCGTCA
CGAGCCAAAGGAACGACATCAAGGTGACCTTCGAGCTCGCCGACCCGCCGGGCGTATCTC
GCTGCTTCGTCCACTTCCCCGGGCTGGCGGAGGGCCGCTACGCCGGAGAACCCGTGGTTG
TGAGCTCGGCGGACGCATTCGTCCTTCTCGTCGTCCCCTTCACCGACGGCTCCGAGCACA
AGGATTTCATCGTTTACAGGGCAGGTCCGGGTGCTCCATCCCTCCGCCTTCTCCCGAGCA
CCTACCGCTCTCCGGAACACTTCACGCTGGCCGGCGTCGTGCCCCTCGTCGGCGCCGATC
TCAGCCGCAAAGACTGTGCTGTGGTTTTCCCTGCCGCCACCTCGCGACACGCACACTACG
CGAACCGCATGGAGTACATCCTCCACGTGTATCGCTCCGATATCTCCACGTGGCCGTGGC
GCACCGAGGTGGTCGGCATCCCATATTACGAGGTAATAATGCGGGACCAAGGCACCCGCG
TGATTTTCGCGGGACGGGAAACACTTGGCTGGGTCAATCATTGGCATGGCATTCTGCTAT
GCCACGTGCTCGCCTACCGTCCGGTCATGCGTTTCATCCAATGGCCTGTTTCAGTTCCTC
GCAATCGGGTGCCGCGGTTCGGCATGGGAGTCGACAATATCCATGCACGGCCGTTCCGTG
ACGTTGCAATAAGCAATGGCATGATCTCGAGCTGAGATCCGGTCGGTGTAGTGATAGCCC
CAACGAGAAGGGGGTCATTGGGCAGGGCTGGACGGTCACCACATGGAACAGGGGGATATG
CTCAAAGAAGTGGAACAAAAGATTCACTATCAAGGCTGATAACGTGCCTCTAACAGGTTC
AAGTTAGCCTAAGATATCGGGTGGCAAGAGGTTGAGCTGGGACAAGGTGGTTCATGGTGG
GCCCACTCTGAGCTTGTGTGACGATGATGTTGTCTACATCATGGCTAGGCTAGACATCCG
TCATCCCGTTGGATGGATGCTTGCCATTAATATCATAGAGCGAACACTGGAAGCTGTCAA
GGAGTGTTCTGTTGAAAAGATGCTCGGGCTTGAACCGACTTATGTTCAGTGTGCCTTGTC
CAGCTACCACAATAAGTGAGAAGGTGATGAGGAAGCGGAGCTTGCAGGAAAACTACGGAG
AAGTCGGTTCTAAATACATGTATTAACTATCTTGATGATTTATAGCTTGCCTACATATTA
GCAACTTTATAGTACGTGCTTCTCATTGAGTTTTACTGTGATGAAAGTACGAGTTTATTC
CTCAAGAATGATAGGTTTACATGTGCTTCTTATTGATGCGTGGTCGTTCTCTATGACTTG
AGTTGAGTTACGAGAAATTAACATGAACAGGAATATCCGAAGCAACAGTGTCCTTTTTGC
TAGGCCTTACTGTCAGCAGACAAGTTCGTTGCAAATTGCAACATAGGAATAATAATGTTG
GCAGTGCAAACTCTTTGCGGCTGAATATCAGTTGCAATTTACAACAATTTACAATAATGC
TTGTCCAATTATGATGCCTCGAGCAATTATCATACAACCGGGAACGAAGTATAACAGACC
AATAAACAAATTTAATTCGAGCTAAAGTTTTGATGGGCCCTTGCTTTTCACGTGCAGCTA
CAGAAGGGAGATACAACTGATGAGATAAACCAACCATTTAATTTGATCCAGTTTTTCTTT
CCTTTTCTTGCAGTTTAGAAGACTACATAGCTAATGCTGACAACAGAAAAACTTAGCCTG
GAGAGTACAAAGGCTACAACGTGCAAAGTGTAAGCGGACGCCTTCAGCATCAGCATAAGG
TAGTCTCCCATTACTTTCTTTTGGAACAATCACCGTGGAAGAGGATCCTCACCTGAATAT
ATTACTTAAATACCCAGAGGGCAAGTTACATCAAATATTACAACAAAAGGAGAGGTATAG
GCGCCAAGACACGGCTGCCTCCTTGCTAACGTGGTCCTTAAATCTGAAAGCCCAAAGCGT
AAAGTATGAGATAATATTACGCAGAGTACCAGTGGATGAGTGCAGCTCGTTGCGAAGGAC
CCGATCGTTCCTGGAATCCCACAGCTTTCAGAGGATGGCGAGGGCGACTGTGGGCCAAAT
GTTGATGTCGAGACCCACAGGTGTGGGAGTAGCCCAAATGAGGTCGATGGAGTGAGAGGT
CCAGTCCCAAGAGTGACCACACCTGAGCCGCGTGTGGGTAGAGGAAGGCGAGGTGCATGG
TGTCCTCGGACATGAGGGCGCACCGAGGACGAGCCGAATCTGAGGTAATGGTCTTGCGAT
GCAAGTTAGCCATCGTGTACAGCATGTCCCAATAAAGAAGCCAGCTGAAGATCTTGACCT
TGATAGATGCTTTAGAGCTCTAGATGTGCTCGGCGTTGAAATCAGTATCATGGTCGGAGG
AGAACAGCCAGTAAGTGTACCTTGAGGTGAACGAGGAGCCGTGGGTGAGTAACCTATCGT
CAGGCAGGTCGTTAGTCTCTGGTTACTTATTCTCGCTAGACGTATGAATTGATCATTACG
TTCTGCACAAGTTCAGTATCCCACACGGCCTTATTTAGTACCGAAAGTTTGCCAACTTGT
TCAGGGCCGGCCCACAGGCCGGGGCAACGGGGCGCCCGCCCTGGGCCCCTGGGAGGTAGG
GGCCCCGGCCCAGCACCGCAGCACCTAGCGAGTAGCGACTCGCCGCGCCTCCTGCGGTCG
CCTTGCCTGCAGAGTCCAGATGAGGAACAACGCCGCGCCTCCCGCAGTCCTGCGCCTGAT
TCGAGGCGACGAGGCCGTCGATCCCGTGCCGCCATTAATGGAGACCAATGGTGATTTCCC
TTCCCCAATCTTCTCCCTCCTTCCCCAATCCCGCAGTCCT