Contig Data
morexGenes
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Map Locations of contig_274444 (6736 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_274444

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44275 8 3332 bp MLOC_44275.1 Available Available LOC_Os09g26160.1, FRAME:-1, EVALUE:0.0, 13109.m02513 protein glutamate receptor, putative, expressed





CDS Structure of MLOC_44275






Contig Sequence (6736 bp)

>contig_274444 6736 assembly3_WGSMorex_rbca.fasta
AAACAAATGTCGACAACGACAACGGCGGACGGCGGATCCGGATCACCGATCACCGAAAAA
AACGGAGAAGCCTCGCGACCGCTGCGCCCACCTAAGAACACCCACCAAGCTCCTAGACTC
CGAGACGCCAGTACCAATGAACACCTCCAAGAAGGGATGCGACGATGGCGACGCTGCTGC
TTCTGTAACCTTGTTACGTGTATGGTTTTCAGCCCGGGGGGTCAACTTGTTTAGGTTTTC
GATTCGGTTTCCCATATAAACTGGATCAGCCAAAGCTCAAGGGATGACTCTTGGCTTTGG
CAGCTTTTTGAGCAATATATTCAGATGGGGATCCTCTTCCTCGCTCCCCCCTCCTGACCG
TTTAAAAAAATGTAACAGCTCTGGAAAATAGCATCAGGTGGCACCTTACAAGACTGACAT
TTCATACTTGGACATCATTTTGGGCAATATAAAATCAATATGCAGGCTATAATTTTCTGT
TTATCGAAACTACAAGCATCTGAATCAGTTGCTCCTCACAACTACCATTAGTTCCCTATG
TGGCAATGCACATCAAGCTATGCGTTCCAAAAGAGATAAAGCGTAAACATATACAGAGGG
CTAAATGAATACCTAAATTACAGTTACCAGTAATTACACGCTCCCCACGTATGTCATTCC
ATGCTTATCTGTCTCCTGCGGATTGAGCTCCCATTCCGAGTTAAGGAAGCTACTCCATTA
TGCCCCCTCTCAGAATGCATGTATGCAAACGACAGTGGTTCCTTGCCCTGAACTGAAAGT
TCCCTACCTGGTGTTCCTTCTCCTTCTGGTGGGCTTCCTGTATCCCTGTCTGCGAGGTGC
TCAATAATGTGATTAGGTATGCTTAGCTGGCTCTCCATTGCATCATCAACATTTTCCGGT
GTGGGTTCATCTTTATCTGGAGTATTACAAGGATTATCGTCCCCATGGAAGAGCTTAGAA
AGAATGGCAGGCCATCTGCGCCATGAACTCTGACTGCTGTCACTGTTGAATTCATGTCGA
TTATTATAAATGGTAACGACAGCGTGCAGGAGTAATGCCAGCATTGAAGATGCTCCAGTG
ATGATGAACAACCCCTGAAAGCTGTGCAATGCAAGGCTGCTTGAAGTTTGGGAGTCATCT
TTGTCGAGGCATGACGTATCACCATACAATTCTTTCTGCATCTTGATCATTCTATCATCC
GATGCAAATTTCAGTATTTCCCTCGAAATATCAGGTGTCAGTGGAGAGCCTCGAGGGAAT
GCCTGCACAGGCAGCACACGATGAGGATCAGAAAAGGCTTCACTGGTGGCATACAAGGCA
GGTGCCCAGGCAGTTATATTGGTCATTCAAGCAAGCCCTCCATAAGGTGATTGATCATAA
TGCTCGCTGTCAAAATGGCTAATGAATTTAGTGAAATTAAACTCAATGAACTTGATACAG
CTTAGTGTAATTCAAACAGAAAGTTAGAGCAAAGTAGATGGAAACCTTATTAAGTAGATT
TATCATGTCATTCAATACTTCAAGAAGCAACCAAGCATTATATTTCCTAATTGTAAACAA
ATAATATTGCACCACTTTGATCATGCATTTTAGTTCTTCACAATAAAAAAATCAAATCTT
AAGTTCGTCCTTCTTTTCCATGTTCACATGCAACAATTCGAGAATTTTGAAGTACAATTC
AAAGACTGGTAAAATTATAATTTTAATCAACAGTTCACTCTAATAATGTTCTTCTGGAGA
TACTCTGGTGGCATATAAACATATACAAATTTGAGCTACTAGCATGATCCTACATCAAAA
TAGCAGCTGAAATTGATTCGGCATCTAGAATTTAGAATGCGAGGAATGTGTTACTATAAA
ACAACTGAAAACTGGTACTCACATAACCAAATCCATCTAACTTGTAGGTTGGTCCAACCA
TAGTGTAGTTGTGGCAATACTGTTTAAGGAACACCTTAAGGTATGGTATCTCATCAACAA
TGACTGCAACTTTTCCAGATGTTAAGGCTTCATTGTAATGCTCAGGAGAGTCCAAGGGAA
TCATCTTTGATTCATCAATTTTCAACCTTTTCAAAAGAACAGGCAAGAAAGAATCATTGA
GGTAGCCGACATAGCTCCCGTTCCTGATAACTTCTTCTAGATTGGTGATTGTTGGCTGAA
GTTGTTCCACTGTGAGAATTGAGCTTAAACTTGCAGTATAACTCTGCTGCAATATCAGCA
CGACGAAAAGCCAAACAACTACTGCAATTCTTGATAAGTTGTTCAGTATCTTCTCCCTAT
GAGCAAACACGAGTGTTGAAAAGGAGAAGTAGAAGATTGATCCAATTTGACTGCCTGGGG
GCCCTCTGAAATCTTTATTTGTTCTATGCTCAATACACCAGACTACAAAACCTGTGAAGA
CAAAGAAGGCCCCAAATCCTAACCATAGGTCAGCTGTCAAAGGATTTAGGAATGTCCATG
CAGTCTTCTGCCTCTGGTCCCGGACTGGAACCAACATGCGCACCCCTGACTCTGTGTAAG
GAAGAGTGAAATCCACATATAGAGAACGGTTGGCCAAGATTGTTATATCACCTACCACCA
CATCATATTCCTGCCAGCAACACATATAAAATGAGTTGAGAAACTTCCGATGGCTTTAAA
AGGCTATAATTCCCCTTTTAACCTTACAGGACTTTATAAGAGTACAGCATATGAAAAGCG
TTGTACACGTACAACATATGCGAAGTAAAAAATTCAAAAAAAATGCAAAGTACTTAATTG
TCAATTAAACTAATAACTGGGAGACAACCCTCAACTTGGGCGTATTCAGATTGATACACC
ATTAAAATAATGCAGATAAGACAAAATGCAAGCAATAAAGTAAAATCTCCTAGAAGAAGA
GTCACAAAATCTCGAAAATTTCTCATGAATGGTAAATTGTACAAAAATGTAATACAACCA
GGAAAAAGAAAGGAACCGTACAATTTGTCAATGTAGACTACTTTTTCCTTGTTTGTGCAC
GGGTTGAACAAGCAACAATAAAGAAAGCTTTCAAGAACGAGGATAATATATGATTTTACA
CGCTCTGTACTAATGACCAACGGTCAATTAGATAATTACACTCTACTCTTTGTATACTTA
ATATTTGAGAGGAAAAACAATGAAATCCTAGTGTGGACAGGCCACTCTGATCATCGCACG
AATTTATTTCATTTTTGCCAGTTTTAGCTCCAAATATATCGCCTCTGGGGTAGGAGAGAT
CGTAAAAAGGAGAAAAGTGGAACAAAAAGAAGTTCATGCATACCTTACGATAGACACTGT
AGACAAGATCGTCATAAGTTCCTTTACTATTTCCTTTCTCGTCTGCAAACGGCTTATAGT
GGCAGGGTACATTGTAGGATAATGTATTAACTACTGCCTCAAACACATCTATGCAGAACC
CCTTGGGTTTACCATTTTCAAATTTTACAAATTCATCAAACCCAGGTTTCACAGGTACAC
CTATTTCAAGAATTTTATTCATTGGCAATAGCCAGCCTCTAGGTACAGTTTCAGTATATC
CTGGTACAGTTTCATTATACCCTGGCCATACGATGGTGCCAAGATCAGCCTTCACATTTA
GACTGCCAGAGATGCCAGATCCTGGAGTCCAAAAACCGACTACTCTTCTCTCCCGACCAA
TAATGTTAATTATCTTGTAATTGACCGATACTAACTGCATGTCTGCAATACAGAAGTTGC
CGCTCATACCCATGAACTTGATGCCCAAGAGCGAGCCTCGCAATTTTTCAGCAGCCTTTG
AAGTATCTATTCTGTCAAAGTCAGTGGACCCATTGTTTGTTACAGATACCCCAAAGTCTG
AATTCACATATCCAGCCTTCTCTGCTGCTAATGCTAATGCCCATATGGTATCATAAGCAT
AGAGACCATACACTGCAGGCATACTTACTGCAATTCCAGGATTCTCCAATTGGTACTTCT
TGCGCCATCTCTGACTAAGGTTTTGAAGTTCCATAGTATGTTCAACATGAGGTTTCACCC
CAAGAACTCCTTGCATCACATCAAGGGCCGGAGAACCAGCCACGTCAAAGATATCTGTCA
AGCCATATGCGATAATCCAGACAAAGCCCCGGCCCATCATCCCTTCATATTTAGCAAGCT
TGAAAAATTTACGGGCTAAAGTATGAGACATACGCACAACAAATACACTTGTCCAGTTGT
GTTTTAAGGTGGAGATGGCACTCTTTATATCATCCTCTGTAGCTGAAGGATGGATCTTGC
ACCTGTACGAAACATGGGTGTCGACTTGTCTAAGGGCGTCAACAAGATCAGGAATGAACC
TGGTATTGGAATTGTCATCCTCGAAGACTGGGATGACTTCCCTCCAACTGTGTTTCTGAA
CAAGTGCGGCAATAGCTTCTGCTTGAGAGGAGTCGTTCCATGCTGTCCGGATGAAGTATG
GAGTTTGTCCAGATCGCGACGGGCTATTTGCAGAAAATGAAATGATTGGGACCGATGATT
TGTTCCCAAGCTCCGCAAGAAATTTAGCCTGAGTTGACGACTGCGGCCCAACGATCGCTT
GCACGCGGACATTTTTCAGTAGATCAATACCTGCAATGATACTACTTTAAAACACATTTT
ACAGCAAATTAAGGGCCACTATCAAACAAATGCAAGCAAAACATGCATAGGTACAGTAGA
TACCAGTACCAGAGCTTTTTGGTGGCTCTGTTCACTAGCATATGATTAAATTGGCATAAT
GCCTGCAGTACAAAAGGTCTGGGACAGACGAGGTCGGTTTTACTTTTACCATAACAAAAA
CCACAACTGAGAACAATATTCCCCCTTTAATAATAAACAGATATAAATAACAACTTTCCA
GAGTAGCTCTAGCTTTTCAACGCATGTACTTCAGTTCCAAATCTAATGTCTCCCCTGCCA
TGGGTGGACGCGGAGACTTTCGAAATTACTTGGCTCGACGAGCTGGGGGACGGAGAAGGA
GGGGATACCTTCTATCTATATACCTCGGAGGGCGGCGCGACGGTGTCGAAACAAGCAAGC
AAGGAGCCGAGGGCGCGCCTAGGAGCGCAGCGCCGGCCGCCGGCGACATGGGAAGGGGAA
AAAATAATAGAAAAGGGCAACCGCGCCAGCCCCGCCGGACGCCATGGACTCGCCGCGTCA
AACTGATGGGCCGGGGGGCAAACTAGGTTTGATCTTAAGCTGCTCAAGGCCCATGACTTG
CCCACCCAAAATATTAGACCCATGTATATTTAGAAGATCATTTGGCCCATGCGCCCGTCT
TCCTAGCGAGTACTGTCTGCTACCCCTCAAAAGAAAAAAAAGAGTGCTGCCTGCTCAGTT
TGAACGAGGAGGCTGTTACGTTACGTACCTGCGGACGCGGCCTCGACGGCGCCGGGGCCG
GTGTCTCGGAGGTGGAGCTTCAGCCTGGTGCGGTAGCCGGCGTGGCTAGCGTCGGCGTAG
AAGTCCTCGAGAGCCAGCTCGATGCACGTCCAGCTGGTGTTCCCCACCCATGTCGACCTG
TCCAAGATCACGCCCACGTCCACCGCCTGCTGCCGCCGCCGAGGAGGAGCCACACCACCC
CGCCGCGCCGCGACACTGGAAGCGCCGAACAGAAGCACTAGAGCGAGGAGAAGGGCGTGG
CGGCCGAGGACCGCCATGGCGAGCCGAAGAAGCGTCATGGCCCTCTTACTTTTGATGAAG
GGAGCGATGGGTTTGTGATTGTGGCTGCCCTTACATGCACAACGCCAGCCAATTCCTTTG
ACTGACAGCTCTCTCTCGAAGCTCACACTCAGCTTATCTTGATCGTGTATTAACTGGTCA
TGGAATTTTCCGATATACTTGTGGTATTAGTTATGGGCATAGTTTTTCTTCTCGAAGGCG
TGTCCGAAAAGCTTTCCCATTCATCTTCAGCTTGTGGTCATATTAGCCGTGGAGCTTTGA
GTTGACCAGTGTCGGCACGGCTGGCTTTTTGTTCTTGCTGTTGTTTTTCTCTTTTTAGTT
GCTGCGTTTTTACACGGTTGTTCCTTAGTTAATTGTGTCTTATTATGATTTTTGATCTAT
GTCTTTTAGTAAACTGGGTTACTCTGTTAATTTTTCTTCTCGTAATAAAATCGCAGAGCT
CCTGCCTTGCAAGCACAAAAAAGAAAAAAAACTAGCCATATATCCTTCCGACCGGGTCAA
GTACACATCTAGCTTCTTCTTTTTTTAGAAAAGGAGGAAGACCCCGGTCTCTGCATTGGA
AGATGCATGCAGCCACTTTATTGATTATTTTTAAGGATCTTACAAAGTATTATAATAATA
TGTCTCAATCCGTCATCTTGGCAACATCTGCCGTTACTTCTATCCATATGATAAAGGGAT
GCTAGCTGGGCCAAATATCCGGACCACTCACCTAAGCCTAACATCAAAAGCCGGAAGCCC
CAGCCGAGCCACATACCGGTCTGGGGCACAAACCGGTCTGACGCACTCACATGTGTCGTC
GTCGCCATCTTTCACAGGTCCGTCTTCAGAGCAGATACTGAGGTTACTACCTTGTCTGGC
CACTCAACCATCGACGTCACCATGACGCAAGACAGCTACCTCCTGCTGCGCGAGTCCATC
TCCGCACATCGGGCACTGAGTCTCCACTGCGCCACGCCGTCGAGATCCACCGCCATCAAT
GGGTAAGATGAAGCACCACTCCACCAAAGAAGCCGCCCACTGGTCCCTCGATCCCGTGTA
CGCCTCCAAGAATGAC