Contig Data
morexGenes
Links



Map Locations of contig_274442 (5377 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_274442

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44274 3 1483 bp AK365477 Available Available None
MLOC_44273 2 929 bp MLOC_44273.2 Available Available LOC_Os07g35310.1, FRAME:+3, EVALUE:3e-158, 13107.m03609 protein TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed





CDS Structure of MLOC_44274






CDS Structure of MLOC_44273






Contig Sequence (5377 bp)

>contig_274442 5377 assembly3_WGSMorex_rbca.fasta
TGGCGGTGACAGTAGGTAATTATCTCTAAGTTTTCAAGGCTAATGGGTCATTAGTAATCC
ATAATCNNNNNNTAGCTGGGGTAGAGTAGATTATGAGTTTTTAATAATCTGATTATCTAG
TTTTTATAAACTGTAATATAATATATCCTATTCGGAGACATAATAGATTATAAAAATCGG
ATTATATAATATGAGTGGTTCCAAACAAGGCCTTAGAACACTACTTTAATAATCTATAAA
TGATTTTATATAAATTTGACAGGAAGTACTATATTAGTACACTAACCGTGGCATGTTTTC
ACCTCACAAGGGTACTCTCCCGGACGGCGATGAAATAGCGGTGAAGAGGCTTGCCAAGAG
TTCGACGCAAGGAGTTGGAGAGCTGACGAATGAGCTCCTTTTGGTCGCCAAGCTTCAGCA
CAAGAATCTCGTCAGGCTTGTTAGCGTCTGCCTGGAGCAGGAGGAGAGACTGCTCGTCTA
CGAGTTCGTCCCCAACCGGAGCCTGGACCAGGTCCTATTCGGTACGAACTGAATCATCAT
ACTACTCATCTACTAATTTCTTGAGCCCATTTCCTCTGCAAAATTTGATGTCCTACTTTC
TGAACTCATGAACCATGCGTAGATACGGAGAAACGCGGCCAACTTGACTGGGGAAAGAGG
TACAAGATCATAAGCGGAATCGCGCGAGGCCTGCAGTACCTCCACGAAGACTCGCAGCTC
AAGGTAGTCCACCGCGACCTTAAGGCGAGCAACGTCTTGCTTGACACCAACATGAACCCC
AAGATCTCGGACTTCGGACTCGCGAGGCTCTTCGGGGGAGACCAGACGCAGGGCGTCACC
AGCCGTGTCGTTGGAACATAGTGAGTACTGTACATGGCACCGGAGTAACGACGCAAGTTA
ATCTTTTTCATAGGCAACTAGACTCAGAACTCCATCTTCTTCTTGTTGAATTGATCGTCA
GTGGTTACATGGCCCCGGAGTACGTGATGCGCGGGAACTACTCGGTCAAGTCGGACGTGT
TCAGCTTCGGCGTCATGGTTCTGGAGATCGTGACGGGGAAGAAGAACAACGACTGCTACA
CCTCCCGGCTGTCTGAAGATCTGTTGACGCTTGTGAGTAGTGTCTATTCGTAAATACAGT
ATATTCTCGGTCACTATCTGATTATCTAGAAGGAAGGACGCGTTGCAGCATAGCTGTTGA
CTGATTTGCCACGAGCTCAATGATTCAGGTATGGGAGCACTGGACGGCAGGGTCGGTATC
CGAGCTGATAGACCCGTGCTTGGGCGACGGCTTCTCCAGGACCGACGCGCAGCGGTGCAT
GCACATCGGGCTGCTGTGCACGCAGGGAGACCCCGCGGGCCGGCCGGCGATGTCGTCGGT
GGTCATGATGCTCGGCAGCGACACGGTGTCTCTCCAGGCCCCGCCCAAGCCGGTGTCCTA
CGCCAGGAGAAACGGCTCGGGCACGTCGTCCACCATGTCCACGGCGTCAGCATAGGAGCA
GTCCTCAAATTTCAGAATAATGTACTTCCTCCATTTCTAAATATAAGTCTTCTTAGAGAT
CTCATTACACGACTATACATATAGATATAATGTTGATTCATTCATTTTGCTTCATATGTA
TTCCATTAGTGAAACGAAAATTGATTTTGGCTCCTGAGCACCATGGAAGCCCTTTTTTGA
AAATAATTCAAAAATAACAAATTTCGGTTTTAGAAAAATCTGAAAACAAAAATTATGCAA
GTAAACAAGGATATTATGTATATGTGTGTAAAATTTTAGGATGAAAAATGTTGAAATGTG
ATCTGTATAAAAAAAATCATGACCTTAGAGGATGAATAGTATCATGTGTTAAAAACCTTT
AGATTTGTCTTTTTTACAGAGCTCTCATTTTAACGTATTTTTTCCTGAAAATTTATACAC
ATGTGTGTTACGCCTTTACATATCTCTGTATTGTGTTTCAGATTTTTTGAAATGTAAAAA
TATGAATATTTTCATTAAATTTAAATTTTAAATTTAAAGGCTTTCATGGTGCTCAGGAGC
CAAACGTCCATTCTCCTTAGTGAAACCTCTAAAATGACTTATATTTAACAACGGAGGGAG
TAGCTGCACGCAGTTATCAAAGACTAGCCCCACCCGGGTTCAGAAAATGTACAAAATGTT
TGTTTGGGTGACAAATATTTTATTGGAAGTTTTGTAAAAAAAATTCTTAGGGTCTTGACC
CATCAGACTGGTCACTACTTTTTTATTAGAATGTTTGCCAGGTTAGTCCTTGGATGACTT
AAAAAAACTATAATCGTGTCAATTTAGGATTAAGTAAATTGTTCGTTGGTCCAGCCGGGA
TGCGTTCCCAAATCTACAATTTTAAACGAGGAGTTTAGTTAGATCTCCAAATAAGGTCGT
GATGGAAATGATCATTTCGTGCGGGCTTGTAAACTGGTTTCCCCAGTACTTGGCTGCTTA
CAATACACAACTGTACAAGTAGGAGCGTTTGTTCTACCATATTCCACATTGGAAAATCTA
CAAGTATATAATCTAATTGAGTTTATCCATTTTAAATAAGGAATAAAACTGTGTCGATGA
ATGGAAAAAAAATACTAAAAATGCAGTAGCAGAAATGCACGAGGGCCTTTAAGATGATAA
TAACAAACCAACTGTCCTTTGCCATCCTTCCCTCATCTTGGTTCAAGTTCTGTGATTGAA
ACTTCATTTGGTGACGCCATAGCTGACATAGCGGCCGACTGGGAAGCCGTAGGGTATAAC
GACTCCGAGTAAGGATTTGAGTATGTGCCGCTCTTGGTGATGAAAAATGATGGCTTGGAT
GGAGACTGGAGGGACACAGTGTTACTGCTAAGCATGACATTTACTGTCGACATCATAGGC
CTATCAGCTGGGTTATCTTGAACACAGAGCAGCCCAATGTGAAAAATCTTCACCATCTGG
TCTCCTGGTGCATGACTTCTCAGAGAAGAGTCTATGATCTCCGAAATTGTCCCCGTGCTC
CAGTGTTCCCATATCTGTATCGAATTAGCAATCAGTATTTATTTCTCACACAAGTTACTT
CAGTAAGGCGTTCAGGATCAGCACAAGAACTTACGAGACTTAAGAGGTCTACAGACTCGT
CGAAGTTATAGGAGCCACTACTTCGTCGTCCAGTCACAAATTCCAACATCAAAATTCCAA
AGCTGAACACGTCTGATTTAATAGAATAGTGACCGCGCATTGCATATTCTGGGGCCATGT
ATCCACTGCAAGAGGAGCACAATGTTAGTATAGTTGACATGCCATTTGAGTATCGTCAGG
CCAAATTGGACCATACTTACTATGTTCCAACAACACGGTTTGTGACCTCCCGTGATTGAT
CTGCTCCAAATAGCCTTGCCAAGCCAAAGTCTGAAATCTTAGGAGTGTAATCAAAGTCTA
ACAGAACATTGCTAGCTTTGAGGTCCCGGTGGATTATTCTCAGCTGTGAATCTTCATGAA
GATACTGCAATCCTCGAGCAATTCCACTTATTATCTTTAATCTCTTTCCCCAGTCTAGCT
CCTTTCTTCTCTCTGGATCTGGCATTTGAACAAGGAACCGTGAATGAGTAAAGTTCAGTT
TTACAACCAAACTATGCTAGCTAATGTTTGGGACCAAGTCCCGACACCCAAGAGAACTTA
GGATTTTCTCCTTGCAATGGTAGGCTTTAGTAGTTGTTATGCTATTGCTGAAATAACGAT
CGAAATAAATTAGTACCAAAAAGAATGGTGTCAATGCTTCTATTGGGCATGTATTCATAC
ACAAGCAGTTTCTCATGCTCTTGCAAGCATACGCCAACAAGCCTGACAAGATTTTTATGT
TGAAGCTTGGCGACCAAAACAAGCTCATTCTTGAGCTCCCCTATTCCTTGCCCTGAATGC
CTGGAGAGCCTCTTCACAGCTATTTCTTGACCATCAGGAAGGTCTCCCTGCATAAGCGTA
AGCAATCACTTGTTGAAGCTGAAAAAAGTATGTTAATGAATCAGTATGGCTGGTACCTTA
TAAACTGCACCAAATCCTCCCTCACCAAGCTTATTCGCCTCAGCAAAGTTACCCGTCGCG
CCGCGTAAGGTTGATAGATCAATTATAAGTGAATCAATGCTATCTATGTCCTCATGATTA
GTCGAATCTGTGAGAAAGCACATAGAGATGCATTATATAGGCACTGCAGCCAATTCCAAC
GTATACATGTTTCGTGACTCTTTATATTTTTTTTAACTAGATGTAACTGTTTTATTTTTA
GGTGATAACAAAATTCAATCTAAACAGAAATTCAGTTTTATCAAAAATAGATGCTAATAT
CCCCTACTAAGGACCATCTTGTTAAGAGCACTATGGATTCAACTCCTAATGGTTCAGTTC
GAAATTCCGAAAGAAGTACTCTTTTTTTTTCTCGAACGCACAGAGAGCTGCGTATCATTT
CATTAAGAAAAAAGAATATGTACAAGGAAGAGTAAGAAGTACTACGCATCCAAACAACCC
TTTAGTAGGTCGAAGCCGACGGTAAGTTCATTGGTTTTGTTCCTACCTATTCATGATTCC
AAACTGTTAAGAGTTTAAGACAACATACCATGTGGTAGCTCACTCCTCGCTGGTCTTCTC
CTTCTCCTCCTCCTTAAATAACAAAGGCAAACAGTAGTGATAGCCAGAATTGCAGCAACT
ATAGGCAGCGCAATAGCCAGAATATTGTTTGCCGATTTTCCTGCAAACAGATGCCATAAA
CTTCAGAAATAGGTATTCAGGATACCATAGAAACGGCTCAAAATATACTTAAATATTTGG
CGCTGGTAGTTAATACATTTTCTGCAATCATGTTTTGTTTGTAAAGGTGCGTAGACGAAT
TTTAAAATGTAAAGGTTTGATCTAATCTAGAGGGCCCCCGCGTCGCCTAACCGCAGGCGA
CATGGGCGGCGATCTGATCTCCACAAACTGCGGCCTCCGTTGTCTGCTCCTTCTCCTCGC
CGACGCCGGAGGCCACAGCCGGGCGAAGCCTGTGCAGTGGCGGCGGCGGCGGGGCCTCTC
TGTTTCAGTGGCAAGATAGCGGCAGGACCGGTCCATATATATTTGGGGCCCTCGGGCGAG
AAAACAAAATGGGACCCTTGTGTACAAAACAAAATTCAGAATATATTGTATTTCGAGAGC
AATTTAGTACATAGCATAGATTAATGGTCTTTGAACTAAAACCACATCAGGTCTTGTTGT
TTTTCCTAACACTTCTGGAAGAAAAGTCATCAATGACCATATGAGTATTTTTTTTCTTTT
ATTTTTCTGGATCTAAGGAAGAAATATCGCAAAACGTATGCTATGCTGCTACCTGGCCGG
GGCCCCTACCTCTCAGGGGGCCAGGGCGGGCGCCCCG