Contig Data
morexGenes
Links



Map Locations of contig_274427 (2612 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_274427

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44267 1 1547 bp AK374393 Available Available None





CDS Structure of MLOC_44267






Contig Sequence (2612 bp)

>contig_274427 2612 assembly3_WGSMorex_rbca.fasta
TTTCAAGAAATGTTCTAAAATTTTAAAGACATAATATGATCACCACCATTGGAGATTATA
ATTGTTTTTCTTCCGTTNNNACGCACGGGTCCTTTTGCTAGTGTTATTTAATAATATGGT
CAGGTGTAACATGGTCTTTTTACATGTCATNNNNTGACCTCTAGTCCCTGTTTAGTCCCT
AAAAACAAACGGATAGGGACTAGGAACTTTTAAGTTGGGACTAAAAAAGTCTCGGGACTT
TTAAAACAAACAGGGCCTAAGAGATGATCCGTTGTAGGTTTTTTTTTATCATCTCTAAAT
TACATGCAAGATTTAAGATAAGACTATCTTATCAACCATTGTACAAGCCCTTACCTCTCT
TCAGAAAATGCTTTTCTCTATCTTGCAATAAATAAGAAATTCACTTGAGTTGTGTCGGGA
AATAAAATGAACAAGAGGGTAATGTCCAAAAGAAGGAAATCTCGACCGCAGTACCATCAC
CATAAAAGGAGTTTGTACCATTCAGCCATAGTTGTTTTAACCTTTTTTGGTTATCATCTT
GAATCTTTTTCTCCTATACCTCTCAAATGTGTTAACCTCACTGGCTAGTGCTGTTTTCAG
TCGTTACCAAGTAGAGTGCCTGAATGTTTCGCACAATGTGACTACAGACTGCTACTTCAC
AACCAAGGGATGGAACGCGCAGACCGCCGGAGCGGCGGCGGTGCTCGTCGCCGACGACAG
GGCAGAGCCCCTGATCACAATGGACACCCCGGAGTCGAGCGGCAAGGAGCACCTGGAGAA
CATCACCGTGCCCTCGGCCCTCGTCTCCAAGCGCTTCGGCGACGACCTCAAGAGCGCGCT
CGAGAACGGCGACATGGTGAACGTGCTCCTGGACTGGCGGGAGTCCCTCCCGCACCCCGA
CGAGCGCGTGGAGTACGAGTTCTGGACCAACAGCAACGACGAGTGCGGCGCCAAGTGCGA
CATGCAGATGAACTTCGTCCGCGACTTCCGCGGCGTGGCGCAGGTGCTGGAGCAGCGCGG
CTACACCCAGTTCGCGCCGCACTACATCACCTGGTACTGCCCGGAGGCCTTCGTGCTGAG
CGCGCAGTGCCGGTCGCAGTGCATCAACCACGGCCGCTACTGCGCCCCCGACCCGGAGCA
GGACTTCACCACCGGGTACGACGGCAAGGACGTCGTCGTCCAGAACTTGATCCAGATCTG
CCTCTTCAAGGTGGCCAACGAGAGCCGCAAGCCGTGGCTGTGGTGGGACTACGTGCATGA
TTTTGCCATCAGGTGCCCGATGAAGGAGAAGAAGTACACCACCGAGTGCGCTCGTGGTGT
GATCAAGTCGCTTGGTGCGTGTGGATGGCTGTGCTTGTTGTGATGATTTGGCTGTTTATT
TATGTGTTGGGGTTTTTGGTTTTTATTTACAGGGATGGACACTGACAAGATTACCAAGTG
CGTCGGAGACCCCGACGCCGATGAGGACAATCCGGTGCTCAAGGCAGAGCAAGATGCTCA
AGTGAGTCTCCTGATGATGAGCTCATTAGCCGTAACGGATTCGTTGGTTGATGGCAGACT
GATGTTTATGCGTTTGATTGTTTAGATTGGTCATGGTGCTCGAGGGGATGTTACCATACT
GCCGACTTTCGTCGTCAATAACAGACAGTACAGAGGTGTCTCCACTCTCCTCCCACTGTA
CATTTATTTCCAGCTCACTGCTGTTTATGTTTACTTTTCGTTTTGAATGTATGTTTACTT
TATGATTTTGTTTAGGGAAACTGGATAAAAGGGCGGTGCTACGAGCGATATGTTCGGGAT
TTGAGGAGACAACTGAACCTGATATCTGTTTGACTCAAGGTTTCTGAATCCACACCCTTT
TTCGTTGTTGAATAAGTCTACCTGAATTTTTACTTTTCATTCATGGTTTGTAATTTTGGG
CTTCATCTCTTGTGCATATATAGACATACAAACAAACCAGTGCTTGGAAAACAATGGAGG
TTGCTGGCTGGACAAGAACACTAATTTCACTGCGTGCAAGGTAGTGAACTTCACTGGGAG
AATGCCGCTGATAATGTTTACCTCACCATTATTGTGTTTAATTTCTTCATTCATGGGTAA
CATCTTCCAGGATACCTTCCGTGGTCGAGTTTGTGAGTGCCCGGTTGTGAATGGTGTAAA
GTTTGTCGGCGACGGGTACACCCACTGTGAAGGTAAACCTCTTTCTTCACCGAATCAAAA
TGATCGTGATACAACCTACCCTTTTTATGTGTTCATGGGTTTGGCAGCTTCCGGTGTCGG
TCGATGCCAAATCAACAATGGAGGCTGCTGGAAGGAGACCAGAAATGGCAAGCCTGTCTC
GGCATGCTCGGTAAGATCATCTCTTTTAGATTGTAGTTTCCTTTCTCATGGCTTCTGTGT
GTGGTACAAAACTGATTTTTTTGGAAATCTTCAGAATGAACAAACCAAAGGCTGCAAATG
TCCACAAGGCTTCAAGGGTGACGGCGTACACGGTTGCAAAGGTATCGCCATTCGAAATAA
CATTGTTCTGCAACCATGTTTGCATATTCTTAAGTAATTTCTTATGTGCAATATCTCTCT
TGCTTTGGGCTTGCAGATGTTGATGAATGCAA