Contig Data
morexGenes
Links



Map Locations of contig_274388 (3103 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_274388

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44246 6 1822 bp MLOC_44246.6 Available Available LOC_Os01g09252.1, FRAME:-3, EVALUE:1e-31, 13101.m00982 protein WD domain, G-beta repeat domain containing protein, expressed





CDS Structure of MLOC_44246






Contig Sequence (3103 bp)

>contig_274388 3103 assembly3_WGSMorex_rbca.fasta
AAATTTCGAATCCCGTGAAATCCGGACCTGACGAAGCGACCCATCACATCAAAAGATCTT
GTTGATCACTCGGACCAGTTTTCGCTTTCAAATTCACTCGGATGCATTTTAGGACAGAAT
CAAATACTTCAATCGACGCCCATTTCTGCCAAGCCTTGGTGTGCATTCGGAGTTTGCATG
TTTTGACAGAATCTGCATCGACCCCTTTCCCACTCGAACCCCGGTCCATTCGGGGGCTAA
TGATGGGGATATGTATCTAGGATAGGGTCATAGGTCTGGCCTACATGTCCTACCCAAGGA
CACATCATTAAAACTTAAAGATTTCAAGGAAGATTCCGACTGATTCGCCATGGGTCACTT
GGTAGAACATCCACTCGGAGACTTTCTCCCTTCACTCGAAGGAAGACTTTCATTCGGAAG
AATTAGAAGCCAGTCGACCGCAGAAGTTCAGAAGCCACTTCAGGAAGGCCAACGAGCGGG
CATTCGACTGGTTGCCATAAGTAACATTTATTACATACCTTACCAGTAACGCACGCCTTT
GTCTTTTATTAATCGAACCCTTGGTTGCTTGGACCTTGATGAGGGGTAGCGTACTCTATA
TAAGNNNNNNCTCCCCTCTGGCACAAGGGTTCACGCTGAACACACGCATTCCACACGACA
AAAGCTCCTGAACACTGAGACATATGGTTGTTACCTCCCCGAAAGGGGCCTGAACTAATA
TATTATGTGTACAAGCTTGCCGTAGCTAGAACTCTGTCCTCTCCTTTCGTACCCTTCACC
TTTACTGTCAAGTTCGTTTCCACAACACCAACCCAATTGGTCACCCACGTGTTTGCAGAG
ATCAGAGTGGAGGCTTGCTGGTTTTGGTGTAGGTGGATTAGATCCTTTTGTGAGAGAGTA
GCTAGGTTCTTCCTATTTGTTGGTGTGGTTTTGGTGTAGGTGGATTAGATCCTTTTGTAA
GAGAGTAGCTAGGTTCTTCCTATTTGTTGGTGTATAGGAGTATTCCACCAATTGGGATGT
TGGCATCCCAAAATATGGTACGTCATTGACATATTCTTGAAAAAAACATTTTATATATAC
TACATACGGATGTATATAGACCTATTCTAAAGTATACATTCATTCATTTTGCTCCATATG
TAGTCCATGTTGGAATCTCTAAATATCTATTTAGGAAAGGGCAGGGGGGAAGTAGTAGAC
ATCACAACGGTGGAGCTAGCTCAGCGCATGCATGAGCATGATCGACTATGCATGCCTAGC
AGACGTTTATGGCAGCGCCGGTGTTGGGGGCTAGCTCCTCGTCTTGGGACGCCCACGTCC
ACACCTTGAGCTCGCCCGCGCCATCCCCGGTGAAAAGCAGCCACGATGGCCCTTGGGCGA
GTTCGATGGTCTTCACTTCTGTTTTGGACGAGAGCGTGCCCATCTCCTCGAACCTGAAAG
ACGGGAATCATTAGTTGTAAGTCACTGGCAACACCAACGAAGCAGAGACAACTGACAGCG
TGTTCTGAATGGCACTCACGATGGCAGGTCCAACAGGCGGACGCAGCTGCGCTTGTGGAG
GGAGCACAACAGAACCGGCGTCTTTCCCGGACGATGCATGCCAAAGAGGGTGCGCACACC
CTGCAACAGAAGGTGGATGCTGGTTTAGCAACAAACACAAAGGGGAAAACTGTTGGAAAG
GAAGTTCAGAAACAAACCATTACCCAAGAACCATAAGAAGGCAGAAAGTTTATCAAGGAC
ACTAGCAACACGCAATACATCTCAACGGAGCTTACAAACGTACACTGCCAAACATGCTTC
CAGGAAGGGAAATATTGAGAAAACCAACAACCGGACATCAGGATATGCATGCAGTGTGCT
TACTATAGACAAAAATATCAACAGCGATATTCAGACTTTCAAAGAACGAATTGCTCTGAT
ATTGCCTCTAGTTCCTGCAGACTTTCAAAGAACGAATTGCTCTGATATTGCCTCTAGTTC
CTGCTGTATGAAGGTTCCTAACCATTCTGGTGTTGCCGATACATTTCTATTTATTAACTC
TTCAGTCAGGGAAACATATGAGCTCAGCAGACTGATGACGTAGCTGATACATGTCCATTT
GATACTCCCATACCAACTCTTCAGCGAAACAGATGGGCTCAGCAGACTGATGGGCTGATG
GGGGCATCTTAAAGTTCCCAAGAAAGAGAGCTTCTATTAGGCTCACCCTTTTATCTGCTG
CTCGATACTACAAAGATAAACTCCCAGCAGACTAAGAAGAACACCTATCACCGAACTTGC
AGGCCATATTCTGCAAAATATGATGCTAGACCGAATGCAGATGGAGTCGAGAAATGGAGA
CCGAATGCACTGTGACTACATAGGAATTGTGGGATCACTTGAGAACAGATAGAAGCTGCT
GAATCCAGTAACACATATCAAGTAATTGCAAAGATTTTCCACTTGGTTTTAGACAAGTAA
TTGTAACTAGGTTGAATTGTGGGATCAGTGAGAACAAACAGAAGCTGCTCAATCCACCAG
CACATACCAAGCATAAATGAAATGAAGAAAAACAAAAGTACGTTACAAAATAGTTATATG
TAGCAAGTGCAATGCAGTAAATTATTTTACACATGGTCGTGCATATTCTCTGGCTAAAGA
TTAGCCAACTCATTCACCACGAAATATTTACCTAATCTACTACTAATAAAATTAGCCTTA
ATATCATTTCAGTTACTGCACATGAAGAAATACATATGCCATAAATATTCAACACATACA
GTTCAATCAGACTAAATAAGGACAGTATCATACTACCACTGATAAAAAGTAAAAACATAA
AGGTGTAGCTAACATAAGCCTTCATGTTTGAAACTTCAATGAGGTCTTCAGAAATAAAAC
TGATGGAAATATTCGTGTAAATTAAGTTTGCAGAACTTACATGCTCCTCAGAGTGGGTAT
GCATGAGTTGAAGGTCTCCAGATTCTGAAGCAGCCCAGGCCTTTACAGTCTTGTCCAGAG
AGCAAGAAAGTAACTTCTGACCCCAACAAAGCACAGAAGTAACAGCAGCCTTATGCTCAG
AGAGTGTTTGGACACATTGAAGATTTTTAAGGTCCCATACCTG