Contig Data
morexGenes
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Map Locations of contig_274332 (4456 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_274332

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44213 3 2334 bp MLOC_44213.2 Available Available LOC_Os01g70020.1, FRAME:-3, EVALUE:2e-87, 13101.m07598 protein DEK C terminal domain containing protein, expressed





CDS Structure of MLOC_44213






Contig Sequence (4456 bp)

>contig_274332 4456 assembly3_WGSMorex_rbca.fasta
ATTAATGGAATCTCTAGAAAGACTTAGGTGGTGTTTCTTTTCAAGGGACTAGACTTTTTT
TAGTCCCAGGGACTAAAGAAAAAAGTCCCTCCAAGAGAGTCTTTTTGTAGTCCCTTAAGG
AAAAGTCCCTCCTGTTTCTTTACCTCGGGACTTTTTAGTCTAGTCCCTGGGTAAAGAAAC
ACCACCTTATATTTAGGAACAGAGGAAGTAAGTGGCATCTCATAACTTGGAACTCAAAAA
ATACAAATAAAGCAATATCAAACTGGAAGCTGTTAAAACAATTCAATAAGTGTGACTTCT
GATAATACTACCAAAACAAAGTAAAGTCAGCCAACATCAATTAAGTCTTTTCATGAGAAC
AAATAAGCTCGCTGATGATCCAAAATTAACTAAAATTAAATAGTTGTAAGACAGTTGTAT
TCTTGTGGGTTTCCTGCATGGGTACAAAATTTCATACCTTTATTTTCACCGGTTGCCTTG
GGACCTGGCTTCTTGCGTGCCTTACTGTTGTTTTGGCTCTCTTTTCCATCATCCTTTTTA
GGTTTTGCAACCTTCTTCTTGGCCTTGTCCACAGGTGTTTTGCTTTGCTTTGTTGAATTC
TTTGGTGTTCTCTTGACAGCCTTTTTGTTCTCCAACTCCACATCTGGCTTTGACACACTT
TTTACAGATTTAGTAGGAGTCTTCTTTACCGATGCATCCTTTTCCTTTGCCTTGGATCCA
GCTTCCTTATTCCCTTGTTTATCATCTTTTGACTTTTTCTTAACTGGTGTCACTTCAGGC
TCTTCATCACTCTTGGCATCTTCTTTCACTTCAGCATCCTCATCACTTCCTCCCATTGAC
AAGTCCTCGGAATCAGCAGGACCAGCACCATCTTCATCATCGTCCTCTTTTTCAGCCTCA
ACTGCTTGTTTCTGACTCTTCCTCTTTTTCTGTACATAAAACCACATCACAATTGAAGTA
CTACACACAAACACTAATTACAAATAAATGCTGCAGAAAGTCATAGGCACTACCTAAATG
CTAGTTACAAATAACTGTTTTTGTGAAATTTAACATAATAATCAATTGTCAACTAGAAGC
AAAATATTAGTGGTTCTCTATGTCCCAAAAAAAACACCAATTATGGAGTACAGAAAGAGA
GCATGAAGAAAACACAAGATAGGGCTGAGCGCAAAAGTGAGTGCAAATTTTTGGCCAGGT
TCCTTGGAGTCCAGTATAGTGAAAAAAAGGTAAGATATATCCCCATAGATTCCCAGGTAT
AGCTTCTTAATTTTTTCATAGTGTTTACAATAAAAGATGTTACTAAACTGCCATTCTTTC
ACCAGTGGAGTGAAAACCTCTCAAATATCCCTTGTTAATGTGACAAACAATAAAAGGCCA
TCTAGCATTATTTATTTTTATTTGAATCCCATTGGGCAATTGGAATAATACTTTGCTACA
TTTCTCACTGTCTCTCTGTGATGCACAAGCCAGCCACTAAACATAAGAGGGTACCTAAGG
TAGGTGTCACACTGTTGGTGCAGGTCCCATGCAAGCAGAATGTCCTTGAGGAACCTCAAG
ATTAAATGATTAAATCACTATTTGAACTCAGAAGGTATTAGCCCAAGGACTCGGGGACTC
CTAATGAATGAGATTCTCACATGGATAGACATTCTTCCATGAACAGCATAACAGATTACA
TCCTTGTCACTTATTATTAAAACTGAAATTCGTTGTCCTAAAGATGGTTTGTTCTTTATT
GTTCTTCACAAATCACACTGTCAATTTCATTCTTTAAAGAGTGTGTTGCAAGAGAGATAA
TTCTAAGAAGTCAAAAACATCCAATAACAAACAGTCATCATCTAACATTAAGAAAAGAAA
CAATTGCAGTAAACTTTCACTGCCACTATGTTGGTGCTGCAGATAGACAGCTACAGAAAG
AGTAGACTAGAGAGACATTTCCAATGACAGATGGTTAAACTAAAAATGAGCAGATTACAA
ATTTTCTGATGCAGCCAACAGAGCACCAGACATCAGGACATAGGTGAAGGCATTCCATGA
TAAATGGGTTTTCTAGCAGAACAAGAGAGGTTAAAAGGCACTTTATGGGTAGATGCAGGT
TTGTAGAAAGGGAATTTTGTAACATTCTTAGCAGACTTGACAAGGCAGGCAGGCAGTGAG
TAATCCCCTCACATGTAATAGGTGGACAGGTGTCTCACCCTTCCTCTCTATGAATATATG
ATACACAAGCATATTCTATAAAAAATGGCACTTTAAGCTGCCATCAGCACAGCATGTTAT
TACCTTCTCTCCACCTTCAGCTGTTGCCTTGCTAGTTCCTTTAGACTTCATGCGGCGCTT
CTTCCCTTTCTGGAATGACAAAGATTAGGATTATGAAATTCGGTTTGCATTCCCATGTGG
AAGAGCAAGATCTGCATTAATTAAAAGACATACCTTCACAGCACTGATAACAACAGCTCT
GGTAATGCAAGGAGACTCCAGAAACTCAAGCAATTTGGCAGAAACTTCCTCCTGAATATA
GCAAAATATTGTTACTACAGACTTCACTACTGAGATCATTAATAACAAGTGCTTAAGCAA
ATTAACCTTCTTTGCAGTACTTTTGGCCTGAACATCGAGTATATCACAAAAATCTAGCAA
CTTCTCCTTGTTCATCTTGTCAAGCTTATCTTTTATCTTGCTCCTTTGCTTTTCCTGATC
AAAATTACACAAGGACATCTATTAAGACAAAAAAACAAGGATCTAAGCAGAATTGCTAGG
TTTACAGCACAGCATCATCACAAAAACTCACCGGATTGTCAGTCCAAACATAACCAGAAA
ACTGGGATAAGTTTCTTTTCAAGAAATGGGCCTGCAGAGAATCAAACGGGCAGTTAACAA
AACAAGCATATAGCAAGTTAAATTAGAGCAAGACAATGTGGAAGCCTCACAGTTGATTTT
CTCCCATACAATAAAGAATGGAGACTCTGCAGATTGTCATCCGCCTTTCTCTTGGTTAGT
TTGAAAAAAACTAAGGAAACAAACTATTAGTCCAACCTGTGAATTATGAGGTAGCTATTC
CCAGAATGATAAACTGTGCAATGCAGTTACAAGATGAAGAGTCCATAATGTCTTTATTTA
TCCAACACTAACTAAAACACAAGTAACAACTTCAATCATATACTGGACAACTGAGCAAGA
TGAAGATCATAACACTCAAAATCAGGGGAAGCAAGTTATGAACATTGACAAACAGTAGCA
CTAACCCAAAGTTCAGAGATAAAGACAAGCAGCAGCAGTAACCAAAAATCCAGAAAATTG
CACTTAGAAAACAGGTTAGGTGACTTATGGAAATTACTCATAACAAACTCTGCATGAATC
TGCTTATACAGTCCTTTGAAACATGCCAATAAATTTTAGGGATGTGCGAAGTTAGAAATA
TACAACATTAGGCAAAGATAACTGAATAAACAGATCCACAAGTCATTTACAATGTCCCGG
GCGCACATAGACCTTGGACTAAGATCCATCAGAAACGGCCCCTGGGTTGAACAAAGACAG
GATCTTATGGATGGCAGGCTGATCCATTCATTATGTTATTTCATTCTACTAGTAACTAAG
CAAACTTCTTTATGAATAACTCTGGAAACACCAGATATATCCACCAGAAAACCAGAGACT
TCAACAAGATCAGGGACTATTAATAAGCATAGCAAGAGGTCATCACTAGAGCAGGCACGC
AAGTGGATCCTGAGCGGCACCACAAGGCAAAACGGGTACAGACATCTAGCAGCAGAGGCA
GGAAAAACAGTAGATAATTCAGGGGCTAGGCGAGAGATTACCGTTGGGGATGTCCTTGAG
CTTGGTCCCAGAGCCCTGAAACAGAGGAAGCAAGCAAGAAGGAATCAGCAGATGGACAAG
CGAGCAGGCGATAGGTTGACGCGTGCAAGAAACGGCCGCATCTATTCTCGGCGCGGCGCC
GTCACAGCAGGCTGAGGATAACAGCGGCGCAGATCGGGGGGGCAGAGGAAGGCGAACGGG
GGACGTGTGCGGGGATTTGACCTGGAGAATGGAGGCGGACTTCTTGGCGGGGGTGGAGCG
CGGGGTGAGCTCGGAGTAGCGCTCGACCGTCTTGCGCTCCCTGGACGGCCTGCCGGTGGC
GGGGGTGGCCGGCGCCCTCTTCCTCTTCCCCTTGGCCCGCTTCTTCTGCGGCTGCTCCTC
CTCCTCGTGCTCCGCCGCGGACGCCGGCTCCTCCTCGTGCTCCTCCGTGTCCATGGGGTC
GTCGGCGGGCGGATCGGCCGGGGCGGGGTCGGCGGGCTTGGCGGCGGTGGCCATGGGCTG
CGGGCGGCCGGCGACGGCGGCGGCGAGCGCGGCTAGGGTTTTAGGGCGGGGGCGGGGGGG
GAAAAGGGGGGGGATTTTTGGGGGGCGGAGCGGGGCGGACGGGGGGGTTGTGGGCCTGGG
GCGCCCGGCGCTGTTA