Map Locations of contig_274328 (10950 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_274328

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_44209 1 462 bp MLOC_44209.1 Available Available None
MLOC_44210 5 2753 bp MLOC_44210.2 Available Available LOC_Os07g26210.1, FRAME:-3, EVALUE:0.0, 13107.m02594 protein non-lysosomal glucosylceramidase, putative, expressed





CDS Structure of MLOC_44209






CDS Structure of MLOC_44210






Contig Sequence (10950 bp)

>contig_274328 10950 assembly3_WGSMorex_rbca.fasta
ATCAACCGCGTTCTTGAACGCTTCGGCTTAGCGATCTACAAGTGTATGTAGATTCAATCT
CTCCTCTNNNNNNNNNNNATCACCATGGATAGATCGTGTTTGCGTGTAGGAAATTTTTCA
TTTCCCATGCAACGTTCCCCAATACGAATGACACTCGTTCGTTCTATCATCACCTTCCAG
GCTGTGTACTCCATGACACCCCTCATTATACCACAGGGCTCCCTCAACAACCTCAACAAG
ATTGAGTGGGCTTTTCTATGGTCCGGCTTGGATAAAACTACTGGTGCAAAATGCAAAGTC
AACTCGGACATTGTATGTCGACCCCCAAGCTATGGAGGCCTAGGTGTTCTCAACACCGAC
AAGTTCGCTCGTGCCTTGAGACTGGGATGGCTCTGGTATGAATGGAAGGAGCCGAGCAAA
CTACGGGTGGGGCTGGGAAACCCATGCACTGAGGAGGACCACGATTTCTTCTATGCCTCC
ACTACTATCGTCATGGGCAATGGGGCCAAAACGCTTTTCTGGGACTCGCCTTGGCTGCTT
GGTCGCAAACCCAAGGAAATTGCTCCCCACATTTTTAGGCCTCAAGGAGAAAGAACTGGA
AGGTGTGCGAGGCGCTCAAGGAGAATGCTTGGATGCTCAGAATCAGAAGAGACACCGTCA
TCATAGGTCACCACATCCATGAATTTTTTACCCTCTAGATGCTCATTCATGACTTCCAAC
TCGACGAGCACTCCGAGGATGACATTATATGGAAACACTCTACGGATGGTTCATATTCGG
CATCGACCGCGTACAAGGCGCAGTTCCTTAGATTGACGCTCTCCCCTATGGACTTCATGG
TTTGGAAGTTGTGGGCGCCCACAAAAGTCAAGTTCTTCGCCTGGCTTGTCTTGCAAGATC
AGATTTGTACCACTGACCGGCTTGCGCGACATGGGTGGGCTAACTATGGCCTATGCCCCC
TCTGCAATCGGGAAGAAGGGAGAACGGGCATCCACCTCTTCGTCAAATGCCGCTTCATTA
TTAGGCTTTAACGTTTGATCATTGTTAAATATGGTCTAATACACATGGACACAAATGACT
GGCACCTTGCGGAGTCCCTTTTGGAGTGGTGGGATAGGCGAACCAATTCGAGCAACCCTC
ATCAACACGCCATGGCTTCTCTAACCATGCTGGTGTCCTGGACAATATGAAATGAGAGGA
ACACTGAGGTATTCCGCCATAAAAATGAACCGCCGCCAATCCTCCTAAAGCATATTGTGG
ATGAGGCCAACCTTTGGGTTACGGCGAGGGCAAAGAAACTAGGAAAAATTGTATTACGCG
AGTAATTGTCATGCCGTTTTCACGGAGTTTTTGTAACACTATGTAACTCTATTCTCCTCT
CTCATCCTCTATTTTTAAATAGCTACAACCCACTAGCTAATTTTCCTCTCCATCCAACAA
TACCACATCATCAAGTCATGAATGGAGTCATAAGTTACTTTTTCCGTTAATCTTTTCATG
CAAAACATACCACCTCATGCATTATTATTTTCCAGGGAATTACGTCATGTAAGAAAGTTT
TATATTTAGTTTTGCATTAATTTTGGTTTTCTATCACTTATCTACATATTTTTTTAACAA
GGTTCCCGCGGTAACGCGCAAGGCATTGTCTAGTTTAATCGTTGAGGCAATTTTTTTGCC
TCCGTTTCGACCAAAAAAATTCTTGCTCTATATATTATTTTTCCCAGAAACTCACTACCT
TATTTATCTTGACATACAACAAATTACCCCGCACATTTCACCCCGGGAAAAAAATCATAC
AATATTTGATTAAACCTTTGTGGGATTCAATTATTTTGCTCGTTAAAATGCCATAAATCC
CAAACCAACATCCGTGATATGAAACCAAAATAAGATATTGTGATGTAAGCATTCCTTGCA
TCGCAGGTGTTGCTTTGCCTTGAGATCCTAAGTGCCATGGTTCCGCAACATCACAAAGAG
TGATTGTCAGGAATCGACATTCTAATGAAGGAATGATCATTGGAATTTCTCTTTTTCAGC
TCTGCTCCCGAAAGAGAAAGGAAACTGATGTTGACGTCGACATTGCTTATTCCAACGAAA
ACAAGAACATTAGTTCATGAACTTCCATGACTTAAAAGAAACCCTACAAGTATTAGGTTA
GACATAGGATCCAAATATAATCAAATTGGTCATTAAAACACACACCCGGCTAAACTTGGA
TTTCCAGTGGTGCCAGGTGCCCAGATCCCTTTCTTAAGTGAATCTGTAAGATATGGCATG
TTACCACACAACATTGTCGACAAGATGAAGTATTTTTTCCACTCTATATGTATGTACAGT
ACTGTACAGAGTTAGGCTCGCTGGCAGTAATCACAATATACAAGACAAGATTGGTTGCAC
ATTACCTTCCCTCTGCGGAAAGTAAATTGCAACTCTGAGTTTCTTTTTTTACATATGCAT
GTACATGAACAATTGAGCTAAATCTCTAATCACACCAGCAATCACAAACCACACACACAT
TGGCTCAAAAACAGCCGCTCTTGGGAGTGATCTTCCTGACGCTATCCTGGAGAAACTGGA
GCGCACCGGGAGAAACGTAGGCCCTCTCCATTGTATTTACCTTTGGGGCCTCGAGGATCG
CCCTTGGAGGAGACAGCGCATGCTGCATTGCCCATATCGCAAGCGGGCGCATGTATATCA
GCGATCTATAGTGGCCATCAATAGTCCATCCTTCCGGAGTTTGAAACCAATACCTGATTG
AAGTGATATGTTAACTATTTATAGCTTATATCCAACAACCATCTCAAATAAATCGAGACC
CTATATATGATTATATCCAACAAACAGTGAACGAGTGGTATTTAATGAAACCATAGGCAT
TACTAGATGAATTAACAATTTAAGATAGGGTAACCATCAGCACTAAAAAGCATGATCCTG
ACCAAAAGAAAATATATGTGAAACAGTAAAACTTTAAAATATAGTGATGAAACAAGAGGT
ATACCCATAGCCCTCTTCAGACCATCCTGCAAGAAAAATGCCTTGTGCTGTAGTGAAAGC
CTGATCCTCCATTCCGTGGAGCAGCATCGTTGCAGCTAAACCGTACGTTACTCCAGTCCA
GATTTCTCTTGACTGCATACATGTCTCGTCTACCTTCCCATTTGGATGCATACCATTGAC
TGCTCCAATGCGTCCTCCTTTCACCCTCATCACATTGTAGTCAAATATTTTCTGAAGCGT
GCATTTTATTCTGTCCTCATCAAACAGGGGTGGCAAGCCAGATGATGCAGTGTACCATTG
TCCAGCCAACTGATCTGCCTGGATGGAGCGGCTACTGTAACTTGTTCCACTATCATAATT
GAAATATGACCCATTCCATAACTTGGCTTCAAACACGTGCTTAGCCTTTGCAAATTTCAC
CATGCACCTGTCAGCGTAGTCATCATGTCCAAGGCTGCGGGCCATTGCGGCTGCAGCTTG
AAGGGCAGCAAGCCAAAGACAACCACAATAGGCACTTACTCCAAGAACAGTCCAAGTATC
ATAAGTTTGATCAGGAAAACCATCATTCTCAATCATACTATCACCATCACGATCAAACTG
TTCAATGTATTCCATAGCAGTACAAACTGCAGGCCAGACATCCTTGCCAAATGACATGTC
GTCTGTTGCAGTAAAATCCCTGTAAACCTGGAGCACAAACTTGGGATTCAGATCTTTCCA
TCTACTTGTATCATGTATATTGTATGCATTCAATTCATGCCAAGGATCATGTGCTCCGAG
ATCATGGGGAACAGCACCAATTACTTTGCGTGTGCCCCATGTACCATCAGCAAGAAATTT
GACTCTGGTTCTATCTTCACGCAAAACAGCTCTAGCAAAGTCCCGTTGAATACTCAGCTC
AATCTTAGGAAAGAGATCCAACAGAGCAAACGAAGCATAGAAGTGTACATCGTAAGTGCA
CCACATGAAGTACTCCACTCCTTCAAGGTACAAAAACTTCCCAACATTTTCTCTGTCATC
AAAATCAGGTTGGCTAGAACCAATAAGTGGAACTGTAGAGTTGCAAGTTCTGTTATGAAG
TGGCAAATCACTGTCCTCAGGTAGACTTGAACTCAAATCACTGTCTGGGAGTACACACCA
CTAGATCAGTAATTACAAAACTACATCATAGAAGCATACGCATAATTATATCTTTTGGCA
TTGTCACCATTCATGAGAGTAGATGCAATTAAAGTGACAAGATTAATTTAGTATTGTGTT
AATATACTGTGGAAGCAATCACATCAAATAAGTTTTCTTTGTTCCAAAAGAACTTAGCCT
TGAAATAAATGTACTATATAGATCAATAAGAACTTGTTCATTCCAAAAAAAAAACTATTT
CCTGAGGAATTTGTTTTTTCTTGTTCTAAACAGCTTAATATTGCAGTGAACTATTTCTAC
ATAGAAATAACCGAATGATAGTTCATGTGGAATACTTCACGTGAATATTCATGAATGGAG
AAAATACAAATTTGTATTGCAATGTCTCCGTTCATGTAAAATAAATACTGTGCTACAAAG
ACGTTGTTAACTTGAAGGTGAGGTCTGGACAAGGACATTCCAAGATGAGACAACCAAGTC
AAATCCTATCAACAGAGAGAAAAGGAAAATCGGGAACAAGAATCTGGAGAGATGATTACC
AATCCAAACAGTTCCTCCAGCTACTAGGAAGTATAACTCGTTGAAGAGAGTAATTTTGTA
CCTGCAAGAGTAAAGTACAATGTAGCGCGTAAATATATATTTATTTTACATGGCTAAAGC
TATAGACAAAAAGGTAGATTCTCTAAAAGACATATGAAATGATGGCTCAAACTCCATGTG
ATTAATAATTGGAAACTGTCCACCTCACTCCCCCAAAGGCCAAAGAGTATTGCACCTCAG
CTTGACCAACAACAATAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGGTAGGGTAGA
GGTGAAACCCATAAGATCTCGCGACCAACTCATGGTTCTGGCACATGGATAGCAAGCTTC
CACACACCCCTATCCATGGCTAGTTCTTTGGTGATGCACCTCAGGTTGACCATGAAACTA
ATTTTCTGAATAATTAACCGCCTTGAACTTTGAACGACTATGAACGCAAAAAACGGAGGG
ACGATCAGGGGAAGGGGTGGAGGGACGATCCCATCTGTAAATATTTTTACTGCGCTCGCC
GTTGCCTACTCTGTCTCAGAGGCGGCTTCGTCGTTGACCCCATGGTGCCCAGCACCGATC
CAACCGTTGTGCTGTTGGCGTCTGACGGCGTGTTCGCAAGATCGCCGACTGTAGCGTGCA
TGGTGAAGCAGCAATTGTTGCCGGAGCTGAGGCTTTGGAAGGGGACTCTCCAGGTGGTAC
CACGGGAGCCTGTCGTCCTCGGTGACGCGATCTCCATGGCAGGATGGAAGATGTTGCATC
ATCGGCAGGGTCTCGGCTGTCCTCATCAACGGTGCGGAGAGTGGTGGCTTCTTCGGCTTT
ATCATCGATGGGCTCTCAGTCAGTGGTAAAGGTAAGCAGTTCGAATCTTAGGGCTGTGGA
TGGCGGGCAGACGGCCCGGCCCTCTGCGGTTCTCATCCCAATCTCGAGGGCCATCAATGA
TGGGCATATGACCCAGTCCGACTCGGCTTTGCATCACAGCCCATGAGGCATGCATAGCTG
ATATGACTATCAGCTGTCTTAGGATTTCGGTGGAGCTTTTGGAATCAGATACCTCAAAGC
ATCCGAGTGGGATGAACGGACACAATATTGCAACAACTAGCATGCATGATGAGGAAGATC
CAGGAGAGAAGATGGCACCTTGGTCGCCAAGCAGGACACGCAGCCGGGAGGCTTATACAT
AGATAATTGATTGACATACACCCAAACATAAGAAATGGGAGAGTAGCCTATAATGCCCCA
GTAGACAAGAACAGAGGACGACTCCTAAAATCGCCCTCCTAGAGAAGTGATCCGGTATTA
GAACTCCGAGATGCAACAATGAAAAACATAGTTTATTAGGGGGTTAAGAGGGCATTTGTT
ATGAAAAACATAGCTTATTGGGGGTAAAAAGTAGACTATTTCCTTAATAATCTTAGAAAT
AGTTATGAGTGTAAGTCATGCACAAGTATTATACTGTACCATTCTGGAAGCCTCTCATCA
CGGAGAATTGGGGTCTGCCACTTATCGATTTCCTCTTCCCAATGCTTGTACTCTGTCAAT
CGGATGGGAATCAATAGACAAATTCAGAAGTAATAAATTAACCAGAAAAATATCTCAACC
GAGAGAGCACCGCCAGAATAGAGTAACCAAAGTACCAAACCATAATCTTCATGTATGAGG
AGAAAATTAACTGCTATAGTCAACATATACCAAATTTATGCCCCAGTTTTTAAAAACAAA
AACATACTCATCAAGGCATCTTGCACCAGGTTTATAGCAGATCTTGGAGACGTTCCGTAG
AATTTCGTATATCTCCTGCCAACAGAGCACGAAATCAAGCCTTATTAAACAAATGGAACA
GCTGGTCTTATTGATCTTAGTATATATTCAGATAAATAAACACGGAAAATTTAAGAAAAG
GTAGCAGAATTATAAATTAAGCAATTACGGTAGACACTACGGAATTGGATTTAAGTTTCT
ACAATCACGATCACTATGTTCTATGAAGTATAATGCTACAGTAAGGATGGAGGATAAACT
AATGAGATGTGCAGAACATACAAGTTTTCACCTACATTGTCCACAACAGCTTTGAAGTTC
AGAATAGATGAATCAACATACTCATTTAAACTTAGCAAGTTAGCATTATTATCACCAAAC
ATAAGAAGTTTGCAAAATATAATTTACCTTTGGTACGTACTTCCCTTCTTAAATTTAACC
TTGGGAGAAGACCAAGCCAACGCAAATACGACCGTACATCTTCCATGTGGTTCAACCCAG
GTTGAAGCAGAAACTGCTGCACAAACTGTATCACCCACTATAGAAGGCATGCTGGGGCCA
GCATTGAAATTATCTCGGTCAAAGCAACCACCCTTTCAATCATATGGTAAGACAGAGTAC
AGTCAAATATTTTTGCCAGTTTTTGTTATTTCAAATAGACAAATCAGTTCAATGTATGAT
TTCACTTCTTTGTACGAGTATCCAAATACCAAGCCTACAAAAAAGAGGTACATTCTACTA
AATGACTGTTGGACAAAAGTAAAAATCACCTGGACCATTGTGCCCCACATCTCCTTAGCA
GTGACTGAACTTTCTCCAGAAAGCCCAAAAATTGGTAACACTGTGACATCAACATTTTGG
TTTTCACGTGCCGCAACAGCAAATGTTACTGGAGGATTATTGTTGGCAGTCCTGCAACGT
TTTTAATTGATAATTATTGCTAGATAAGCAAAAAACTAGATTAGATTAGAAGAAACATGC
AGAGAACGTCATGTATCTGGCAAAAACTTATTGCTTCTTTAGACAGAGATTGTGGGTGCT
TCTAATACAAATATAGGGATGAGAATACGTTATGTCACTGAAAAAACTCTGTCTCCAAAT
CGATCAGAACAAGCCAGTGTGGAGATACTGTTGCAAACAATGACCAGCTAGAAGCTCTTA
GTTTGCAGTTGGCACTTCACAGAAATGCTTAAGGAAATCTGCCAAATGATCATAGAAAAG
ACAATTATGGACAGTTGATGACTTACTTGTGATGTAAGAGAACACCAGAAATTCCATTTT
CTCCACTGCATACGAAACAGATTGCAAATCATTTCACTATATTTTTAGTTATACCATAAA
CTGTAAACATTAAGCGAAGCCCAACTGACATGAATGGTTCATTTACATGACCGCCAGAAT
GATGTGAAAGTCCACCAATAGAGTTCTGGGTTTGCATCAAGAACAGAACATGATTAAATC
AAAGAAACAGAAGGAAATTTTGTATAAGAACATTGGAGTAAAAGAGTAGCAATTACTACC
GCCCAGGTCATTACTAGGCTGACTTTTGCCCTTTCCTTTCCGGTATTCACTAGCTGCACA
ATTTTCATACCCATAAAACATAAGATTACAGATACTACATAAGGCAGCAGTTATTAATAA
GAAAAAGCATGATGCGAAATCAAAATTCTCTCGTAAAATTGGTGGTCGTGCTACAGTAGT
CAGATGTACAGTGATACTCTCAGTGTGTTAACAGTGTATACACTCTCCATAAACATACAC
GAGCTCTGCATACAAGCTTAAAAACGAGGAGTTCAAATTTCAGACATGTGAAACATTAAG
TCGATATTGTGCGATAATAAATATTGCCCCTACAAGTAATGAAGAACTTACAGTGTAGAC
AAAAACGGAGACTGGGAGACTACTCTCTTCGTAGTTGTGGGGAATAAATGGAGATATTTG
ACGGCAAGATAATTTCAATTCAGGATCAGGTTCACCTTTTAAATCAAACGGATAAGAACT
TGTAAGTCTCATTAGCACGTACCTTTAATGACATGCCTCTAATTCATACTAAAAGCACTT
AATGGTTTATATTTTAGTGGCGAAAGTGTTTAGTATTTTGTTTTCTTATACAAAAAAAAT
CCTGCATTTACCCCCTTCATTGCAAATAACACGTCGTTTTAGACATGGATACAGTCCTAA
GCGGTAACTTCAACCTTCATTTTGTATATGAAGATATGATTATGTTGCTAAGAAATAACA
AAATAATCGTAAAATATTTAGAAAAAGCTAATGATATTGTTTTTTCTCAATAACCTGTTT
ATACCGTAGGTGTGGATGACACCAACCAAACTAACCCGCAATCTGCAGACCTGATAGATC
AATCATCATATGGTCGCTAGCGCAGGCCTGTATGCATGTCTAAAACGACATGTTATTTGC
CCTATGTCATTTTATCTGCTTCTGTTCATATCCTCCTCGAATTATGCTTGCACTGAGATT
TTGCTTATACAATTGGATCCTTCTCTTATAACTAAAACAATGTTTTTAACAAATCAACGA
CCAGCACCCTCAACCTTCAGTCCTTAGGTTCTAGTAATCAACGTTTACACACTCCTTCGC
CAATGCTCATGCTAGGGCCTAATAACTTTCCAAACACCTTTTTAGTGTATCGTCCTAAAG
AATTTGTATGTTGTCGGTAGTCTAATTATTTACAGAGCATAAGATGGTAAAAGGAACTTT
TTACTATATTTTTATGGGAGTCATGTATCCATTGAACATCATTAGTGTATGTGGTGGGGT
CTAAGTTATTTAAATAACATGCAGCATGCATGTACTATTGTTTATAGTTCAACTAATAAT
AATTAACATGTGCGCTTAAAACTATTTTTGCATGTGAGATTTTCCAAAATGCAACTATGA
TGATGTATCGTTTGTGATTTATGTAGCTATAGTTACAAAATATACCTGCTATGATCTGTG
TAGGACTCTAGGTACAATGTAGTTATATAATTACACAATCTACCAGTTATGATCTTGCAT
AGGTACAGTTATGAAGATCTATAGGTGTGATATATTTAGGCACAATTACGAAGAATCGTA
CGTATGTTTATACAGATCTAACAGATGGGATCTGTTTAGGCATGCTTATGTACTAGATCT
AATGGGTACGATCATTTAGGTACATTTGTGTTGATCTAATGGGTGTGATCTGTTTAGGTA
CATATATAGATCGAACGGTTGTGATCTACTAATAAAGAGACGGTTCACCAGATCAAAGAT
CAGATGTTTTGCTTTTTTTGCAGAAATTTCTAGTATAACTCTCTATTTTCTACCATATTG
TGCTTTTAGTATATATAATATATAATAGACAGATGTAAGGTATTGTGCATGTCCAACTAA
AAACTATGACCTATGAGTCATAAGATAAGGAAACTGGAGCAATTTTTTTATCATGATGTC
CGTCTTACTGCTTGGAGTGATTTCTTACTAAAATAAATGAGTAGCATTACCATCATAAAC
AGTCCATGCTCGAGGAAACAAAGCATGGTATGTTGAACGATCACCCCTTAATTTCCAATC
CCAGGATGATATGCCATCATCGCTAGATTTTCTGAATCAACAAACATAAAATGATCAGTC
AAGTATTTACGATACAACTGATATTAGAAGCTACTACCTCCGTATCATAATATATGACGT
TTTAGCAGCTCAAATGAACTGCTAAAACGTCATATATTATGGTACGGAGGGAGTAGAAAG
TAGAACCCACAAAAAAGGCGGATTATGCTTGTCTGTATGGTCCATATAATTGACAAAAAT
AGTCTAAAGACTGGCGCAGATTCATTCAATAATTACAAAATTATTTTTTATAATAGACTG
TTTCATGACTAACTCCACCTATGCTGTCTCAACATAACCAGTCCCAAGCCCCAGTAAAGG
AGGAGGGTTGTGATAGGCTTGGTGAGCCAACGTCAAAACAAAGCCACTCTTATGGAGATG
AAACCCAAAAGGACTTCGTAAGGGCGTAACCCTCTTTGCGGCGCGCCATATCTGAACCTG
GATGTGGTGTTAAATGGGTAAGGGCCAGGCCGTCACCCCTTGGTGGTGCGTCGTATCTTG
ATCTGGATACGGTGACAAGTGACCAAGCATCGGGTAGTCGCATCCTTAGTGGCGCGTGCT
ACATCGACACCCGAGTGTAGTGAAAAGTGAGCAAGGACCTTCGCGTTTGACTCAACCAGT
GCGAAGGGTAAGGAAGCTAGCCGAGCCAAGTAGGATCCGCTTAGATAGTTGGAATGTAGA
TTGTAGGGTCCCTGGCGGGTAAGTTACAGGAGTTAGGGCCAGTTCTTTTGCTGGCTTCTA
GAATAAGCTGGAATAAGCTACCCCTTCCCAGCTTATTCTAGAAGCCCAATCAAATTTATT
TATTTAGAAGTCTACTAATTAAGACTTGACTAATAGGTTTCTAAAAAAATATTTTTGGTT
GGGCTTCTAGAATAAGCTAGGTAGGGGGCA