| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_274172
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_44090 |
2 |
1749 bp |
MLOC_44090.1 |
Available |
Available |
LOC_Os10g28200.1, FRAME:+2, EVALUE:0.0, 13110.m02388 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
CDS Structure of MLOC_44090
Contig Sequence (4847 bp)
>contig_274172 4847 assembly3_WGSMorex_rbca.fasta
TCCATGTTTAGTCCTTGGAAAGAAACGGGTAGGGACTAGAGACTTTNNAGTTGGGACTAA
AAAAAGTCTTAGGACTTTTTAAAGAAATAGGGCCTTTAATCAAGCCCCCATGATGGGCAC
CTTGGCACCATCATGATCACACCCCCCAATCGTCAAAAGGCTGCACTGTACCACCACATG
CATCAACTTGGGTACTACCTCACGATACCACTAGTAGCAAACCACCGCGAAGACCGGGAC
GAAACGCAGACCCTTCGCAGCCACCGGCGCAGCCGGACGTAACGTGCACCAAGCCACGGC
CCCTCGCTGCCATTGGCGCAGCCGATGGCAACGTGCAGCCGAGTCTGACGCACGTTCCCG
TATTTGTCTTGTCTCCTTCCCTCCTGGTCCTGGGTCTCTCCACCTACCCACCCATCCCGA
GCACCCCTACATAACCCGATCTAGATCGCGGGAAGCCCATCAATCCATCCAGGGCCGCAC
ACCGCCGCCTCCTATCCCGCCACCCCGACGAGAAAAAGGGAGACCACGCCGCCATCGCCA
TCGCCAGTCGCCACCTCCCCCGCCTCGTTACCGCCGCCGGCACCCCCTCCCCCCGCAAGC
GCAAGGTGAGCTCCTCTGCAGGATTGCTCTCTCAGTCTGCTTGGGCGTATGCAGTACGAA
CTATGAACTATGAACTGCCTCGTACTAATTTGCATGCATGTAGTTCTTGGTGCACGATTT
GCTGCTGCCATGAATTGGTACTGGGCGTGGGCGTGTGCTACCGCCTTAGGCGCTATGAAT
CACGCGAAATTCAGTGGTTGACTTTGGACAGACAGCAGGCGGGCGCTTGCTGTTCATGCG
TGCTAGTGTCACCATTAGCTCCCAAGATTCTCTCAAGACTCAAGGAGGAGTGCTCCTGCT
TAGTTAGACCATGTGTAGCCACAATCCTCCTTTGACCCGAACCCACTCTCCGATCTAGTA
CATGTGGATCCAGCCCCTGTCAACATTTTTCAAAATTTCTTGATCTTGCACCGTTCGCCT
GAATCCATATCTCCTCCGTCAGGTTGCTCGTAGTCGTAGGCCTTCCCAGTCTCCTTTTCT
TCTTAACGTGATTGACTACCACAATTGATAATGTTCCGGTCATGCCTGTCGGCGCTGTTC
GGCTTCCCTCAACATACAGAAAGTTTCAGGTTTAGCTTGTGTTCAGCTGTGAGAACCTGA
GAATACCTCCCAAGTCGTCTCATCCGTCTAACTATATTTTCTTTGACTTCGTCGAAGGAA
GATATCGCGTTCAATAGAGCCGACACTCCTGGCATAAAGAGTTACTGAAAACAAAGCTGG
TGTAAATTCAGTTTTCCCTGCATTTTAAATAAAAACCTGATCCAGCTCATGCTGATGCAA
AACAACTGTTTTTCAAGGATAACCGATGATGAAAATCTGAACCAACACACTGCAGAACTT
TCTGTATCTCCGTGTGTGGCCGTCCAGAATGATTTGCTATGAAAACAAATTAACAGCACC
AATGCATTGGCCGTGAGACAAGTGACATTTTTTGAAGGATATCTGATGCTGTTAAGCTGA
ACACACTGCAGAACTTTTTGTATAACCATACATGGCGAATTGAGGCCGTACGGTGAGACT
AGTGACCTTGACAGTTTACTGGTGAGACTAGTGACCTTGACAGTTTACTGGTAAATCATG
CTAATTCAGCTTATCAGTACTGTCCAATTATGGCCACAGTTGACATACAAAACGAGGCAA
TGCACTAATGTGGACAATGCTGGTGCATGGGACACAGCATTAGTGTTGTTCGAAGCAAGT
TGGATATTTTATTCCCTACGGTGCTGGCCTGCTATAGGTTTAATTAGAGGCTCTAGGCGT
TCTAACCTTCAGTCGATGGTTCCCCCCATGCTTTACTTTGCCGGCCAGGCGCAGATTCCT
GTAAAATCTGTGGGGAGATGTGTATGCTGAACATAAATTCAGCTGGACCATGGCTCCACA
GAACATGTCCATTTGATTGAAATGATTGAGACATGACAAGGAATTCATGACCAGCCCTCT
AAACAATAGATGTGTACTGATGCACTGTCTTCAATCCTAGCAGTTTTTCTCCTTAACTCT
ATTTTGTCTTTGTGTCCTAATTCTAATTATGTGTCTATCTGAAGAGAAATTCACTAATAC
TTCATATCAATTTGACTTCTAGTATACTCATTTTTATTTCAAATTCTTTAAATGATAGAA
TGGGGAGCACCGACGAGACTGGAACTCCCTATGGCGAGTACACCTATGCTGAGCTGGAGA
GGGAGTTGTACTGGCCATCCGAGAAGCTGAGAATCTCGGTTACTGGAGCTGGTGGTTTCA
TTGGATCCCATATTGCTCGCCGCCTGAAGAGTGAGGGGCACTACATCATTGCCTCTGACT
GGAAGAAGAACGAGCATATGACCGAGGACATGTTCTGCCATGAGTTCCACCTTGCTGACC
TCAGGGTCATGGACAACTGCCTTAAGGTCACCACCAACGTCGACCATGTCTTCAATCTTG
CTGCTGATATGGGAGGCATGGGGTTCATTCAGTCCAACCACTCTGTTATCATGTACAATA
ACACCATGATCAGTTTCAACATGCTTGAGGCCGGGCGTATCAACGGTGTGAAGAGGTCTG
TAACTTCATTTACAAGATAATTCTGTTTTTTAACCAAGTCTATTGGAAAGGGTTTATTTG
GAATTCAGAAATTACTTGAAAAGCTTTCTCATGCAAGTGATAAAACCTGGAGAACATTTA
TTGTGCATGGTGGTCTTTAGAAGCTTTGTTAAAGATGCTTGCATTTGACAAATATATTCA
TTAGTGGCATATCCAGATCTGTTTCTTGTCGAGTTGATAATGACACTACCAAACTGAACT
TAAGAAAACAGTAGTGCTGCTACGATATCAGAATTAACTCTGTTTTCCGTTCGAATTGTT
TCAAGCACATGTCTACTGTGCAAGTACATTGCCTCAAATCCAAATAACTTACGTGTCCCA
TATTGATTCGATTTTGTTTTTCTTTGGTCCTGCAGGTTCTTCTATGCCTCGAGCGCATGC
ATCTACCCTGAATTCAAACAGCTTGAGACAAATGTGAGCTTGAAGGAAGCTGATGCCTGG
CCTGCTGAGGTGAGTTCATAGGAAATTGAAGCCATTTTTTATTATACTCAGAGATGTGTT
CAAACACCCAGATTTTAACTTCTTTTGTTAATGTACTACCATTCAGCCACAAGATGCCTA
TGGCTTGGAGAAGCTCGCGACCGAGGAGCTGTGCAAGCACTACACCAAGGACTTTGACAT
TGAGTGCCGTATTGGCCGTTTTCACAACATTTATGGTCCCTTTGGAACATGGAAAGGTAA
AAATCCACAAGCCCGATCATAATGTCACCCTGAGGCAAAATAATTCAATTTTGCAATTTG
TTAGGCGGTCGCGAGAAGGCACCAGCTGCCTTCTGTAGAAAGGCTCAGACCTCCACCGAA
CGGTTTGAGATGTGGGGTGATGGTCTACAGACTCGATCGTTCACTTTTATCGACGAGTGC
GTCGAGGGTGTTCTGAGGTATGCAGCTACTACTCCTCACATTCTCCACATTGTAGCAGAC
AGAACTACCCATTTTTAGCCGATAAAGGGAATATATTAATATCAAGAAGACACGAATTTA
AAACTACTGCCTTGGTAGAAATGAAAAATTAACATGTTGACACACTGTACTTTGCAGATT
GACAAAGTCAGACTTCTGCGAGCCCGTGAACATTGGAAGTGATGAAATGGTGAGCATGAA
CGAGATGGCTGAGATTGTTCTCGGCTTCGAGGACAAGAAGCTACCCATCCACCACATCCC
TGGTCCAGAGGGTGTCCGCGGCCGCAACTCTGACAACACCCTCATCAAGGAGAAGCTTGG
CTGGGCCCCCACAATGAAGCTCAAGGTAATGTAGCCTAATTGTTGAACACTGAAAATTCC
AACCCCACATGATAATAACACTTGAAGCTCTTTACATTAGCACAGATGCAGGCTGGTCCT
GTTATGATGGCTGCAGAAAAACCTCAGGAAGTCGAAGATAATTTAACAATACCCCTGAAT
TCTGTGCAGGATGGCCTAAGGTTCACCTACTTCTGGATCAAGGAGCAGATCGAGAAGGAG
AGGACCGAGGGGAAGGACGTCGCCCGGTACGGATCATCCAAGGTGGTGTCCACACAGGCA
CCGGTGCAGCTGGGCTCCCTCCGCGCGGCTGACGGCAAGGAGTAAACAACTATGCATATC
AACCCCAGGCCTATTATGCCACTGCCCAATTGCCCACCGATCGGATCCTTCGTTGCGAAA
ACACTTGAGAATTGCACAGCCTGCCCTGCCTACCCCATGTGTGATTCAGCAGATTCTAGT
GCTCCTGTTCATTGTCACCCCCATTAATTATTATCATCGTGTCAACAGAATTCCTCGTAC
ATCACACTTTTGATTGGATGCACAATAAAATTCCCTTTTCTCTTGTCAAACAATTTTGAG
CTGTATGCATGCACCTGTGTGCTTTGTTGTCCAGGTCTGGCCATCTGGTCGTCAGCCAAT
TGGTCTGGTCATCTGTGCTTTGTTTCATTTCAGAGTTCCTCGCTCCGGAAACATCGTGTT
GCCATGAGCAGTCTCGACTCGCTCATGGGGCCATCACCGGTGCAGATATTCTCTGTACTA
CATGACACAGTTGCGCCCATTATGCAAAAGTAGAATATATATAACTGAAAGTTATGTAAG
CCAAAGTATATGGATTTATTATAGACCAATAGATAAGCATGGTAGTAGCTCAATTGAAGA
GTTAAGTCTGCTCAAATTATCGTCTCAAACAGCGGATCATCATCACC
