morexGenes - Barley RNA-seq Database

Contig contig_274094
Source Contig contig_274094
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_274094 (9373 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_274094

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_44058	1	631 bp	MLOC_44058.1	Available	Available	None
MLOC_44059	4	4046 bp	MLOC_44059.1	Available	Available	LOC_Os07g05190.1, FRAME:-3, EVALUE:0.0, 13107.m00469 protein leucine-rich repeat family protein, putative, expressed
MLOC_44057	1	1345 bp	None	Available	Available	None
CDS Structure of MLOC_44058

CDS Structure of MLOC_44059

CDS Structure of MLOC_44057

Contig Sequence (9373 bp)

>contig_274094 9373 assembly3_WGSMorex_rbca.fasta
GCCCGGCAGTCGGTCGTCCCGAGCCAGGCGCAGCTGGCGTCGGTGGTGGCCACCACCCAC
GTCGATGCCAAGAGGCGGCGTGTTGGCCAGCACGTCGTCCCCACGACCGCCGCCTCCCCC
GCCCCGGCTGCCGCCTCCCTTGCCCCGCCCGCCGTCTGAAAGAAGGCCTCCCAGTTGGGT
TTGATGGTTCTAGTCTCTAGTCTTTTCCCTGTTTTTTAATCCTTAAAAATGTCAAAAAAT
ACCAATTATCAATCCTTAAACTCATTTAAGGTTTTAAGAATTTAAGAGCACTACTAGTGA
TGCTCTAACCATCCCCAGCCCGCACTCCTCCCTAGCCCCGGTCGCCGCCTCCCTTGCCCT
GCCCGCTGCCCGGAAGAAGAAGGCCTCCCGGTTGGGTTTGATGGTTCTATTTTTTTTTTC
TGTTTTTCAACCTTAAAAGTGTCAAAAAATACCAACTCTTAATCCTTAAACTCGTTTGAG
GTTTTAAGAATATAAGGGCACTGTTAGTTATGCTCTAACCATCCCACACCTCAAACGCCC
GCACGGACAGGAAGTAGTGTGAGCTTCAGGCCTCCGATTCATTCGGCCAGGCAAAATTTG
GTCTTTGGCAACCAAACAGGCCCTCTCCAAACATAGTTTCAGAACTCTGTACCCAAGGTG
CAGGCGCGACAGGCGCCTCCACGCGGCGGCGAACATGGCCGCGGCCCTCCGCCCCCTGCT
CCGCCGGCACGCAGTTCTGGCGCCATCTCCGATGCTGCGCTCACTATTCCCCTCGCCATA
CTCCAAGGTAAGATGGTTTCGCTGCTTGATTTCCTTTGGGCCCTCGCCTCGACTGGACGC
GCTAATTTCGCTCGCCTCTCCAGGCCGCCGCCACCGCCGCCGCCGCCAGACCCCCATCCG
TGTGCCACGCGCCCCTGCCGCCTCCCCTTCTGAGGGAGGTTACTCCAAGAAGGGCTCCTC
CAATTCCAAAGGTACTAATCTGCATAGTCAGCTAGAAAAGAAAAGGGTTCCGACCTCCCA
AATCCACCGAAATTGCTGGTCGCTTTCCCGAGCTCGGAGAGGTTAGAAGGAATTAGGGGT
GAATTTTTTTATTTTATTTTTCTTTTATCCCCCAACATTTAAAGGTTGGGAGATATGTCG
ACCTAGGCCCTGTTCCTCATTGCTTGTTCGGACTGCCTTGATTTTATTTCTTTTAATCTG
CAACCTGATGCCCACCCTGGACTGTCGAAAACTCTTGAATTTCTTGCCTTCCATGATTCA
ATGCATAGCTCAGGCAGCAATGTCAGTTGGCAAGTATGTAACTTCCGTGTAGAGCTATGG
GGCCGTACGAATTCTCTGTGATTTTGCTTCAACTGGAGGCAGCATGATTCAGCGAGAGCA
CTCTCCAAACATGTCGCGTCAATAATTTACAGCAGAACCAGAGCGCCGTGTGATCGGCTT
CGCTCGATGACAGTGCAATGGACACTGCCCGCGTCATGTTCCCGGGATATTGTCGTTTGT
ATTTAACCTTCCTTCGAAGGCCAACCAGAGAAATACCTACACCTGAGGAATCACTTTAAT
CCAAATGTAGCTGTCTGATTTCCTATAAATGCAGAAATGTGAAGTTGATATTGATTAAGT
GTGTTGTTTTTGTTAGCATGATTTGAATGGTTTACATTTGACATTGATGTATCATCTACT
TTTTTTTTACTGAAGTCGATTAAAATGCAGGGTGAACCACGCCGCTGCACTGCTGTTCAA
AGTACCTTGAGTGACAGTACAAAGTCGTTGCTGGATAAACTGAAGGATCTCAAGGACAGT
AAGAAGTCACTGGAAGACATGAGCAAGAATGTTAAGGAGCGTATGGAAATGATAAAGAAA
GCGGTGCATGACGCTAGGGTTGCTACTGCTATGTTTAGGGTAAGGCTGGATGACCTTAGG
AAACTTCATGACAAAATACGTGATGGCCGAGAGGATTCTGCCAAAATGAATGCAATATAC
CGCAGATTGGAGGATGAATATGACAGAGATTGGGCCATTCATGAGTCTAAGCGTCGCTTG
ATTGACGAGCAGATGAAAATGTTAAGGAAGGAGATAGATGACTATATCAATGCTTTGAGG
TAAAGGGATACAACAATCTGTTCTCATTGGCGTAAGAAGCAATTTATTATTGTTATTAGT
TTTGAACTTTTGATAACTCGTGTTCATCCAAACATGCATATCTCTTTGTGTCTATTTTGG
AAGGGGGTGTCATGAATTGCAAATATCCATCCTGAAGCATGTGGAGGAGGCGGAGAAGGC
GGAGAAGGTAGAGGGGGCGGAAACCATGGAGAAGGTGAGGAAGGTTGTAAAAGTGTGTGC
CACTGCTGGCCTCATGGGAGGGCTTCTGCTGATACTGGGAAAGATCTAGATTGGTTTTGT
GTAGAACTGAGATGACAGATGTGACTAGGCTGAGCTGGTATCTGGAGTAGCAGAGTAACA
TTTTTTTTTTTCTTGGTTTTTCTCTGTGTGCCGTTGTAATGGTGCCTTCGTGGGAAGGCT
TGCCCTGATACTAGCAAAGATCTGGATTAGAGCAACATGGAGTGCTTTTTTTTGTTTAGA
ACTGAGTGGCCAGATGACTAGGTGAGCTGGTATTTGGTGTAGCGCGGTAGCTATTGACTG
TTTCCTTGGTTAGTAGTCTTATATGTGCCATTTGCGGTGCTTGTTAGAACCTGCAAGAGA
AGCTAAGAGGAAGCCAAGTGATGGGATTGTTATACTGCACTGCAGTTGTCTCTATGTAAC
ACTAGAATACAAGTCATTTTATGCACCCTGAAGGCTTGACTGAGAAAAGGATGTGTTGGT
CTTGGAATGGGGGTTTGTCTTGTGCTTCAGTTTTATGCCGTTTGGCATCCTTATCTAGGA
ATTAGGTTTGGAATCTGAGAACCTGCAATAGTTGGAGAAGAATTTCGTAGTCTTGCCTAG
TTGAATTTATGAAGCATGGACAGCTGTGGTTGGAGGGTAACGTTCTTCACCGAATCTTAC
TCATGTTGTGAGCCTTTCTTCTTCTGAAAAGGGTTTCCCTCCAATTCAAATTCAGTTAAC
AACTTTACCCCAGATTCACTCCCCTCTAAAAATACATTTGCCTTTTCTTCCACTAAACAA
GCTAATAAAATTTAAATATTGCCTTTGTTTGTTTAGCTTTCTAGAATTGATAAGCACTGC
TGTCAAATCAGTGTGCGGGTTGCTGCATAAATCTCTACATGAAACCACACAGGTGATGTA
TGGATCTCGGTGACAGCTTTGAGATTTCAAAAGACAGATTAGGGCACTCCTCTAAAGTTG
GCTAATCTAGTTGCAAAAGCAGATTCCATAATAAACAATGTAAGTACAACGCGCCGGCAC
TTGGCAACCAATGAGACATGCCATCTCAACTTGCAGGCATCAAGTTGATGCCACACACCT
AGAGAAATACTCGAGTTTGAGGCACAAGCTAACAGCACATGAGTATCCCAACTCTAAAGC
TACAGAATGTTGGTGGCTAGCTAGATTGATGAAAGATCCTCGTACACAGACTTAATCCCA
GGCCTTTCGGAGACCGGTCGAATGCATCTCAACGCAATGCCCAGCACCTCCTTCGTGCCC
TTCACCCCCTGCGGGTTCTCCGAGTCTAAAGCCATGGCCGGGTCAAAGCACTCCGATCCT
TGGTCTTCCGCCACCCGCAGCCGGACCCAGTCCGTGAGGTCGACGCCGCCTTCAGAACCC
GTGATGACATCACCGGCGCACCGGCCAGTCAGGAGCTCCAGCAGCGCAACACCAAAGGCG
TAGACATCAGACTTGAACGAAGGGGATGGCTTCTTGGATGCCGCCAGCTCTGGGGCACGG
TAGCCCAGCACCCCCAGGTCAACAATCTGCTCGACGACACCGGCCTGGGTCATCAGGCGG
TGCAGGCAGTAGTCGGCGACGCGGGCATTGAGGTCAAGGCCATCCAGCAAGATGTTGGTG
GCCTTGAGGTTCCCATGAGGCATTGCACGATCGAAATGGAGGTAATTCAGGCCACGTGCC
ACATCAACCGCGATCTTGAGCCGCTGCGCCCAGGTCAGTGGCGGGCCTCTCCTTCCCGGT
CGATCTGCTCAGTAACATAGACACAAGAAGGTTGAATTAATGGCTCAATAAGTTTTATAG
AAAGAGGAGGTTCTTTATCAGATTGATAATGCATCTGCAGAAACTGGATATCGACAAAAT
GGAAGCATTATATTACCATACAAAAAGCTAGCCAGACTTCCTGGCGAAACATAGTCTGAC
AGGATGAGTTTCTCATGTGGTGTTGGACCCCAGTAGTATCCACGCAAGCCAACCACGTTG
GGATGCCGGATGTTTGCAAATTTCCTGGCCTCCTTGGTGAACTCTTTCTTGGGCCTCGCC
ACACCTTCTCTCAGCCACTTCACTGTCAAGAACACACCATTCTCCAGCGTTGCCCTGTAC
GAAGTTCCGTGGCTGCTCCTCCCAAGCACTTCAGCTGGCGCCCTTGAGAGTTCCTCCGGT
GTGAGCGTGATTGTTTCATCCAGGAAGTGCAGCTCCCCTGCTAACCTGTCAGGTGACCTG
ACGTCCAACCGTGATAGGCCTTCCTGTGCATACGCCTCTCCAGAATCTGGTGACCAAGAG
AAGCGGCTCCCCTTGGATGGTGAAAATCCCCCCACACCTGACAACTTCTCTTCTTGGCTC
GGTGCTTCAGATGTAGAGCCCTTTCGAGGAGCACCAAGATCATCCGCCGACACCTCCGAA
CTACCTCTGTTGTCCTTTCTTTTCATGCTCTCAATGTCTTTCGTAGCCTTGTGGAGGTTC
TTGTCAGAGACCTTCTCTGAGCTAGGGAACTGCCGTGAGATCCGCTTGTAGTGGCATACA
ATAGCAATAAGGATAAGGATGACAAGAAGAACAATGCTAGCTGCTACAAGTCCTATTTTA
GCACCTGTGCTGAGTGATTTGCCACGTGCTGAACCAGATTGGGAATTGCCGGATCCAGAT
GAGCTAGCAGGATACTCTAATCTCGAGTTCCCGGGGTGGAAAGAAGATTCTGGGAACTTT
CTCAAGTTCATAGGCACGACACCAGATAGGTCATTAAAAGAGGCATTGAGGGACTGAAGA
GTATCCGGAAGTGTGTCTGGCAGTGGCCCCGTGAACTGGTTTGTTGATATGTCAAGGGCA
GCAAGTGCTGCAAGCTTAGTCACAGTGGCTGGTAAAGGTCCGGAGAAGTTGTTTGAGGAT
ATGTCAAGGACACGGAGGCCAGACAAGGAGACCACATCATCAGGGAGGCTGCCGCTAAAA
TGATTTCCAGAAATATCAAGCACTTCAAGACTCAAGTTTTTGGACGAGGATCCTGGGAAC
GATACGCCACCAGTAAGCATGTTATCTTGAATGTAGAGCTCATGCAGCATGGAGGAAGAG
AGTAGATTAGCAGGAATAGGACCACTAAACTGATTGGAGCTGAGGTCAAGGACAGTGAGT
TTGGGATACAAAACAACGGCTTCAGGGATGGTATCAGCTAGAGAATTATGAGAAAGATTC
AGGTAGTTTAGGCGAAGGAATTGAGAGCTCACATCAGGCATAGTCCCAGTTAGATTGTTC
TGGCTAAGGTCAACATATTCCAAGTCATTGCTCCATTTCCTAAAAACTGATAAATTTCCT
CGAAACTGGTTATTTGATAGATCTAACACAGTGCAGCTTCCAGCAAGCAGTGGTAGATCC
CCAAATAGAGCATTTGAGGACAAATTAAGGATCTGCAAGGTAGTTGATGTGATCATATTG
ATATGTCCTGCACAGCACAGAGAACTACAGTTAGTATGGAGGAGACTAAGACATACAAAC
TAATGGGCAGATAACTGACAGATTATCATAGTAGAGTGTCATGCTAGAAAAGTAAAACTG
CAGATAACTATGCATGCATTTACACATGGATTTCCCACATTTTTCTAATGCTGAGAAAAA
GAAAGACAATTTTACATCAGACACGTCTGTGAAGCATCAGATGCCAGTGCCATAAGTATG
AAATGGAACTGTATGACACAACCATAGCTTAGCTCTGTACTGCATAGGGCTAGCCAATAA
CACATCGCCTAGCGCTGTCCTGCATAGGGCTAGCCAATAACACATCGCCTAGCGCTGTCC
TGCATAGGGCTAGCCAATAACACACCACCCAGCGCTGTCCTGCATAGGGCCACTCTACCT
TACAATGGTAAATGATCTACCAAGACAGCACACATACTCACGCGAGCAATCCCCGATCAA
GTACTCCCTCTGTATCAAAATGTAAGAAATTTTTTGACACTTGTCATAGTGTCAGAAAAC
GTCTTATATTAAGTTGCAGAGGTAGTAGTTGCAAAGGAGAAAATCAATTGTTTCTAGGCA
ATGCCACAATAGACAGCAATATGTATATTTGTTTGCACATAGAAATATGATTCTGCACAG
ACAATTTGAAATATAGAACTGACAAAGTGGTACCATACTAAGTCAACCACCGACCAGTGA
GACATCAACTTGTATCCAGTAATCACCAGCTAAGATCATATTTGTCATAACAAAATCAGC
TGACATAAATAAAGAATGAAACCAGGTGCGAGATGATAAAAACACAAAGTTTCACATGAA
CTGTAAATAGACCAAAGTTGCAATATAACCAGAACGAGCATTGCATGCCATGCATAAAAT
GAAATAGCAAGAGGATCAAAAACATAAATTCTGAACTAGAGGTTATACCTGTCAGGTTAT
TTGCACTGAGGTCCAGTTGGTTCAACACCAGAGAATCTCCCTTCAGAAGTCCACTAGGTA
CAAACCCAGTGAATCCATTGTTTGCAAGGCGCAAAACTTCAAGATCATAGACATAATTGA
ACCCTGGGAGGTCTCCAGACAGCTTATTACTACTGAGATCAAGCACCTTCAATCTCCCAA
AAGTTGAGAGCTCAACTCCATCTATCAGTGACCCGGTCAACTTGTTGTTGCTAAGGTTCA
GATACAGAACTGTCTCCGAAATATCTGCGAGAAACTTGAGTTCTTTGGGGGTGGTGCTGG
TGAGCAAGTTTCCACTGAAGTCAACATGAGTAACAGTTGACTCGATCAAGAATTTCCAAT
CGACGCCGCCATCCAATTGATTCCAGCTCAGATCCACAGACTGGAGGTTCACAAGGAGGC
CAAGCCCCGCAGGAATGCCCTTTGTGAAGGCATTATATGAGAGGTTGAGAGCAACCAAGC
TCCGGAGACCTTTCAGAGCTGCTGGCAATGGGCCAGACAGAGCATTGCCGCTCACATCCA
GCGACTGAAGCGACGCGAGGCCATCGATGGAGTCAGGCAATGGGCCTGAGAAGTTGTTCC
CGGCAAGCGACATGTTCTGCAGGCTCCGGAGACTGCCAATATCATCAGGGATCGGACCCG
AGAAGCGGTTGCTGGAGATGTCCAGGAACTTCAAGCTCTTGAGACTGGCTACATTGCTAG
GGAGGCTCCCGGAGAGATTGTTATTGGCCATGGAGAGCTTGACAAGCATGGTCAGGTTGG
CAAACACGGAGAGATCGGCAACACCCGAGATCCGATGGCCGTCAAGCACAACTCCAGCCA
CGCTGGCGCCATTGCAGACGACGCCGTTCCAGGAGGCCGGGCAGCCATTGAAGTCAATTG
ACTCGTCATTCCAGGAGTCTGTGACGAAGCCGGCAGGGTCATGGGTGATTCCCTTCTTGA
AGGCCAGGAGCGCGAGGATGTCTTGCGACGGCAGTTGGCCCAAGGCAGGGGCGGCCACCA
GCAAGAGCAAAAACAGAAATCTGCCAACAAACCCCATCGGATTGACGCTCCTCCACGGGA
AAGACTGGAAGCTAGCAGGCCTCAAGAAGACAGCATTTCCCGGAGCGAAAGCTGGGCTGA
GCTTGGAGTGTACCTACTATCACACGGGGACTGCACAGGTACTAATAGACAGAGCTAGCA
CTTGTCCCTTTCAGCTTGATCTGCACAAGACAGCAGCCCACACTCACATATAGAAAAAAC
AAGAGATTAACTCCTTGGAACCTGAAATGGACACAGAAATGGCAGGTCAACCACAGGTTC
GTTCCTGCTTTCACGGTGCACTAAGAACCAACGCAAATGGAAATGGCTAAGAACCAAATC
TTTGAGCATCCAAGTAGGAAAACTAAGGTAAGAATCTAGTTGTAACACTTAACTGCCAAA
GAAAGAACACAAGGACAGTTAATAAAAACCCACGCCAATAATGCAGGTAGTAGAAGAGAA
GTAAAAGTACTGAGCCCCGCCCACTAAACGCAACCACCCACCACAGCTTCTCGGCCATGA
ACACAACGGAACACAGCTCAAAAGCAGCAGAAAGTCATCTCCCCTCCAAGAAAGCAAGAA
ACCAACCCTCGAAGTGCAGGGCAGCGGAGGAGCAAAAAAAAAAGTGGCTGCAACGCAATG
AGCTACCCCATTTGCATCTCCCTTACCGCGCAAATGACAAGAAGTGTGAGGCACCGGCAC
TCCGGGAATGATTGGGCTGAGCTGGGTTGCAGTACAGGGGAGGCAAGGCAATGCGGTGGG
GCTGAGCGGGAGCCGGGGGTGAGAGGGCAGGTGCGGAGGGAACCCTAACCCTAGCAGCCG
GGGGTGGGGATAATGGCTGCCGAGAAGAGGGGCGGAGGAAGAGAGTGGGGCGGAGGAGGG
GGAGAGCAGAGTGGAGTGGCAAGGGGCAGTGGGGGATGGGCGGGGTGTCCTTTCTCTGTG
TTTGGCGCAACAAAGAGATTTTTTTTTCTGCTTGCGGGCGCGGCACCTTACTGTGACTTT
TGCGTTATGGTCCTTACAGGAGGTTTTATATATATACTTGGACCTTCCGCCTTCGTGAGT
GTTGGGGGTGTGTATGTGTGACTAGTAGCACCACGTAAGATGTGGGTGGGGGTTCAAAAC
GTGAAACGGCAGCGAAAAGGAGAAGGCTTTTCTTTCCCGCGATGTCGCTCGAGCCGCACC
CGCCAGAAAACACAGCAGCCAGCCTCGGGTCCTGTCCTCTCCTCGCGGACCCCAAACCCG
CGGGTCAAGTGCAGCTCACTCCCCCGCCTCCACGCACGCACACCGTCAAAAGGGTTCGTA
TCGTTTCACCATGGGCCCCGTTCCGCAGATCCCGGTCTCCGCGGTCGCTGCGTTTCGTTT
AATGGCCTCGTCAGCCGAGCCCGGAACCACATACGGGAGGAAAATGTGCGTGGGTTTTCC
TTTCGGCTTTGCTAACAAGTCTTAGTTAATACTCCCTCCGTTCCTAAATACTCCATCTAT
TTCTAAATATAAGTCTTTTAAGCGNNTTCACTATGTGTCTACATACGGAGCAAAATAATT
GAATGTACACTATAAAGTATGTCTATATACATCCGTATGTAGTTCATTGGTGAAATCTCT
ACAAAGACTTATA