morexGenes - Barley RNA-seq Database

Contig contig_273851

Source Contig contig_273851

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_273851 (482 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_273851

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_44015	1	473 bp	MLOC_44015.1	Available	Available	LOC_Os05g01940.1, FRAME:-1, EVALUE:4e-15, 13105.m00139 protein zinc finger, RING-type, putative, expressed

CDS Structure of MLOC_44015

Contig Sequence (482 bp)

>contig_273851 482 assembly3_WGSMorex_rbca.fasta
GGGGCGGCGGGTTGCGGCGCATCTCCTCGAGGAACCCGCCGCCGCAGCCCGGGCAGGCGA
CGTCGGCCCCGTCCTGCGCTGGCGCGGCCCGCACGAAGCGGTCGCAGCTGTAGCACCAGT
ACGACGCCGGCGCCGTCGCGGCGGGGGAAGAATCCATGGACCCGAGACGCACGGCAAGAA
AAGACGCTGACTTTTCCTCCGTCCGGGCTCAGATCTGGCCGGCAGAGCTCAGCACGGGGC
CGGTCTTCTCTCCTGCCCTCTCCCTATTCCGCCGGCGGATGGTTATAGCTGAACCTCGGG
GACTGATCCGGCGACGCGGGGAGAGGAGGGCGTCGGATCGCTTGGCCGGCGGCGACGGTG
GTGGGGGAGGAGGAGGAGGAGTGTTGGGAGGAAGAGGAGGTGGCCCTGTGGAGGGAGGGA
GGGAGGGCCGGTTGTTGGGTGGGGGAGGGAAGGAAGGAAGGAATGGAGGAGACGGTGGGG
TG