Contig Data
morexGenes
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Map Locations of contig_273714 (3228 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_273714

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43987 1 587 bp AK361603 Not available Available None
MLOC_43986 1 1463 bp MLOC_43986.1 Available Available LOC_Os06g41010.4, FRAME:+3, EVALUE:3e-94, 13106.m04278 protein zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed





CDS Structure of MLOC_43987






CDS Structure of MLOC_43986






Contig Sequence (3228 bp)

>contig_273714 3228 assembly3_WGSMorex_rbca.fasta
CCACACCCACGGCGGGGACGGCCGCAGAATGAGAGAAAAAAAATATCGGCGCGGGGCCCC
TGGAGGGGCCCCCCCGTCATTCCCCCGCTGCCCCCCTCTCCTCCCTTTTATCCCTCCGCC
CACCTCCCCACGTTTCGCCCCCATTTCGAAGCCCACCGAATTCCTCGCGATTCCTCTCCC
CTCGCCTCCTCGTCCTCCCCCTCCTAGGGTTAGTACCCCCTCCCCTCCCCTCCCCCCGGA
TTCCACCGCGGGTCGACCTCTCCCCCCGGATCCGCCTCCAGATTTAGGGCTCCGGCTCCG
CCGATCCGGGCTCGTTCTTTTCCGCCGGAGCTTTTCCGTCGCTGATGATTTCTTGTTGTT
GGGTCCGTGTGCAGGGATCGCCGGAGAGGAATCGCGACGAGGGCTTCCTCCTATCAGGTT
CGTGGCTCGCCGACCCTCCGTTCCCGGTGATAATCATCTGTCTTCCCTAGGAAGTTCTGC
CATAGCCTCTGTGCTTTTATTTATTCCTCTTGGTCAAAAATCCCTGATTTTCCTCTGGCC
GTCGATTCCTCCGGCCGCACCAGAAGCCACCGGCCGGGTACCGATTTGTTGGCTCGACGT
TCAATTCGGCAGAACCGCGACGAGCCACGGCCAAATTCGGCGCTCCGATGCAGTAAAGGC
GGCCGGCCTCCTTTACACGTATCCGTCCGGTGTGTTTGTTGCCGCGGCCGGTTGTTGATG
CGGCCGCTTTCGCAAAAGTTAGTGCGCGGATACGGTTTGCTACTTTACGGATTTGTTGCC
GCTGTTGCGTAAAGCGGCGTAAAGTCGGGGCCTTTCTTTAGAATTAAATTTCCCCTGCTC
TGCTCCGATGCCGGTAGGTGATTAGGCCGCTGTTGGCTAATTATAAGCCAGGCAGGTTGC
ATCGTTTAGTGCTGGTGCCTTCAGCTCTGTGTTTGACCAAGCAGCCACCACTATCCTTTT
GTAAGATGCTTCGTAGAGCACCTTGCTTTACCAGAGTTGGATTCAGTAGGCTAAAACATA
CTGTATGTTTGAAGATTATGCCATGTTCATCTCTAAATTGTTAAAGCCGCAGTGATTGTT
CGAAAATACTTACAGTTTGTGCCTTGCTGTTTATCATAGCCCTTGTGGGTTTTGTTGTGT
TGACCGTGTTGTGTCTGGTTTGTAGTTAATTAACCAAAGCCATGGAGCACAAGGAGACGG
GCTGCCAGTCACGGGAGGGTCCGATCCTTTGCGTCAATAACTGCGGCTTCTTTGGCAGCG
CGGCGACCATGAACATGTGCTCCAAGTGCCACAAGGAGATGGCAATGAAGCAGGAGCAGG
CCAAGCTGGCCGCCTCCTCTTTTGACAGCATCGTCAACGGTGGCGATGCGGTGAAAGAGC
ACCTTGCTGCTGGCAGCACAGCGGTCGCAGTTGCTCACGTTCAAGCGAAGACGCTGATCA
CCGCACAGCCTGCTGACATCGCTGGTCCCAGCGAGGCGGCCATGGAGAACCCCAAAGGCC
CAAGCCGGTGCAGCACCTGCAGAAAGAGGGTCGGGCTCACCGGATTCAACTGCCGGTGCG
GGAACCTCTACTGCGCGACGCACCGCTACTCGGACAAGCACGAGTGCAAGTTCGACTACC
GCGCTGCGGCCATGGACGCCATCGCCAAGGCCAACCCGGTGGTGAAGGCGGAGAAGCTCG
ACAAGATCTAGGAAAGGGTCGGCAAAACAGAAGGTCCCAAAATCAATCTGCGCTACCTCG
TCATCGTGCGTCTTTGCTGCATTATCCTTTCATCATGCTGGCTTCTGCAATCTTAGTTGT
TGGGCAATCGTGATGCACGGCACACGCGCCTCGGCGGCAGCCCCAGGTCCGAACGGTCTC
CTTGTTGGCTATGTTGTGTAAGCTTTATTTATGGTCGTCTCTCTGCGCGGCGGAACGGTA
ATGGTATTGTGGCTTTCGCATTTTGGCTAGCACTCTGTAATGTACTGCTGTTTCCTCCTG
GTGTCCGTCTGTTTGTCTGTCTGTCTTACAGTCGCAACCGGTAAGTAATGGTATCGAGTA
AGCGTCGTCGTCTGTTATTATGGTACCCCATGGTCATTCGCCCTTGTCAATGGTTGCTGA
TCTTCCTGATATCCACCAGAAGATAGTAGTTCTGTGTCAGGTGAGATGTTGGTGGAATTC
TGCTCGGAGGCTGGTTGTGAGATGGTGTCTGATATCGAGAGAATAGAATTCTGGCATGTC
ATGCTCGTCTTGTATGACCAGGACGAAATGCGGTGGTGGCGGTCTGCGTTTGGCCGCTGG
GGTGGGTTTCTACCTGCAGTCGTCCGCTGCGTCGTCTTTGCCCGTTTGTCTTCTACGATC
ATGCTCACCATGCTCTGCTTTCTACGCACAATTTCTTTTCTACGCACAATTTCTTGCCCA
GATTCTACTGCTCTATGCGCACAATTTCTTGCCCAGATTCTACTGCTCTATGCGCATTGT
TTTTCGTTCTACGTTGGCGGCATGGTCTCCCTCCCTCTTGCTTTTGCTCTTGGATCTGCC
ATTGAATGTTTCGGCGGGCTCATCGCTGTCACCAGCGTGTACCAGGGTTTCTGGAATTCT
GGTGAAGCTTCCCTGAGATAACGTATTCTACGTCGTGACATGAATATGATGCATTTGACA
CCATCTTTTTGATATTTTTTGCGCCTGCCAAAACTTCATTCCCAGAATCAGAAGATTCTT
ATCCGTTCAGACAAAAGAATGGAACAACTGAATTTTTCAGTTTCCTTCTACTGTATTATT
CGGTAGACACACCGGACTGGACTAGTTCATCTGTCAGGTGCCGAGGTTGAAGTAGACGGT
GTAGAACTCGTCCCTCAGCGTGAACAATGGCTCCAGGAGGAAGCTCCTCCGCGCCCCCTT
TGCGGCGAAGCTGATCGGATGGTACCGCCGCAGCGGCTCAGCCCGCGCGAAGCTCGCCGC
CTGCCGGGAAAACCCCGTGCCGCCGCCGCCGCAGCCGACCTGAACATTCGCCTTCGCGCC
GGCGGTGACAAGGAAGCACCCCGGCCTGGCCCCGAGCTCGAGGGACACCGACCCGGGCTG
CCCGTCAAGCCCGGGGACGACGTTGAACAGAGAGCTCGGGCCCTTCTCCGCCGACAGCGT
CAGGCTGTTGGTGACCGCCATTCCCGGCATGTCGAACGGCTCGATCACCCCCGCGGCCGG
CGGCCCCCGGGGGTTGGGGGGGCTGGGCGCGCACCCCGACTCGCCGTG