Contig Data
morexGenes
Links



Map Locations of contig_273630 (4203 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_273630

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43971 3 1513 bp None Available Available None
MLOC_43972 1 2179 bp None Not available Available None





CDS Structure of MLOC_43971






CDS Structure of MLOC_43972






Contig Sequence (4203 bp)

>contig_273630 4203 assembly3_WGSMorex_rbca.fasta
GGCCGCGGGTGCTAGCGACGGCGACGGAGAGGAGAGGGAGAGGGTGGTGCTCGAGGAAGG
GGGAGGTTGGCCGCGGTCGGTCGCCCGCGGGAGAGGAGAGGGGGGACACAGTTCTAACGA
TACACAATGTGCTAGTGTTTATGATCTAACATATATTGCGAAAGTCAGGACTTGAACTTA
AGATCTTAGCTCTGATACCATGTTAAGCTTCATGCNNNNNNNAACGCAACCAAAAGTCCG
AACTGATGAAAAGGACTAGTACAATTCACATATATTGTAACATTTATTACATAAACTGGA
CTTGTTTTGGAAGTGGAGATTTCCCCTATTATGTGGAAACCAAACTATTTAACATGGATT
TTCTTTGAAACTAATCGACCTTTGCCACAGAAAGAAGGTGTTGCCTTACAAACCGAATCA
AATTCATGGATTTACAACGACCTCGGTTGTGACTCCATAGATAAAAATAGAAAATTTCTC
TCTTCAAGACCATTGAAAAAGGGTCTAAAAATTGTATCAGCTTTTGGTATGGTCTATCTA
ATTAAAAGATGGATTGATGTTGTGTGTCATACCGAACTGATATTGTGAGCCATAGCATGG
ATTTTATTACCTGAAAGTCCAACCACATGACATGCCACAAAAACATGAAATGAGCTTTTG
GAAAGACGATTTATCACTTTACCTAGTTTGTGCTTCCACTAGTCGGCAGTCGACACGCTT
AGAAACTTCTGGGTGCCTGCAGATTTGCAAAAGCAATGACTAACAGATACATATATTGCA
AAAAAAACAGAGGATAATCACTTTTATTAGATGAAATAAACAGATCAATTTACATAAGCC
TCACTTCTCCAAACAGTATTCAGGACCATGATAAAACCGATTACGTAGCTCTGTTTTGGA
AGATCCAAATCCTCAAGTTGAGTTTCATTAATTGGAATCGATTGTATGCTAAACACGATG
AACAAATGGTGGGTTACGTGGCATAGCATACAACTATTCCCCTATTATTCTGCATGCATG
ATCTGAATCGGACTCCTTCCTAGTTCCTAGTTGGCTCTGCTTTGAACTTTCATCCACATC
TCTTTGAGTTATTATTAACAGACGCAAGAAACATTTTTTTGCGCTAAGCCAAGGTGAGGC
AAGGTCGCATTGGAGGACTGATGGACTGGCTTCGATGGATTATGATATACTCGGTTTTGC
CTGTTTGACTGTTACGTTTTTCTAATTTTGTGGTTAGGAATTTTTCGCCGCAGAGTATAG
AATAACTAAGCTCAACACAAACAATTTAGCAAGCACATTAAACTGGGATCGTAGGAGCGC
ACCTGGATTTTGTTGGTTGATGGTGGATGAAATGGGTGAATTTAATAACTGATATAGTGT
CAGTGCAACGGAAGCCCATTTTTCATACAAGTTATTAATATTGTCAACATTTGTCAACAA
ACAAATGTTTAACTCAGGTTTGCAATTATGAAGCCGCAATTATAAGAAGGGGATATTATG
ATGGCGTGAGCAAGTGATAAGGCCAAGGGGAGAAGAAGTGCAGCATCTACGCAGCCCAGT
GAAAGATAGTGAAAATACAGAGAGGCAGGGACGGGGGAGCAACACATGGAAATCATAGAA
GAACAAAAGAGTTTAAACATAGGAGGCAGATATAATGGACAGCTAAATCTGCATTATCTC
ATTTGGGAAATGAAAAAAAAAATCCTATTCTTGTGTAAATCAAAACTATTTGCCGCGAAT
TTTCTTCGAAGATCCTGTGTTAATTTTAGACACGGCTGACCAAAGGTTTTCAATTAGTTG
AGTTTTGTCACGGAAAGGTGTTTCCATACATCCAAAAATTCTAAAAACTTTTGATACGGC
GCGTTCGTAGCATAGATAGATGTTGTGAGTCACTGGATAGATATTGTGAGTCATATCGTG
GATTTGTGTTGCCTGCAAATCCAACTACATGACAAGCAACAAATGAGCTTTTGGAAAGAT
GATTTCTCAATTTACCAGTTCCATGCAAGCTACCTTCCACTACTCGACATGCTTAAAAGC
TTCGAGTGCCCGCCGATTTGCCAGCAATGGCTAACAGACACATATTCTGCCAAAACCCCA
GAACAATAATCACTTCTCGTAGATGAAGAGAACAGACCAAGATACAAACGTCCACGCTTC
AGCAAACAGTACCCCAGAACTAGGATTAAGCCGATTACGCGGCTTTAGCAGACCGTCCAA
AAAAACTGTTTTGCAAAGCTCCAATTCCTCCTTGCTTATCCAATTTCTTTTGTGTTGGCA
AACTGCACTTTTCCAACCGATTTTATTCTTCCCGTGTTTCTTCTTAGGCTAACTAACACA
GCCGTGCACATAGCCATGGTCCGGAACCTTCACCTCGTCCCTATAAAAGCCCAGCCAATC
TCCACAATCTCATCATCACCGAGAACACCGAGAACCACAAAACTAGAGATCAATTCATTG
ACAGTCCACCGAGATGGCTAAGCGGCTGGTCCTCTTTGTGGCGGTAATCGTCGCCCTCGT
GGCTCTCACCACCGCTGAACGTGAGATCAATGGGAACAACATTTTCCTTGATAGCCGCTC
TAGGCAGCTACAGTGTGAGCGCGAGCTCCAGGAGAGCTCGCTCGAGGCGTGCCGGCGGGT
CGTGGACCAACAGCTGGTTGGCCAGCTGCCATGGAGCACGGGGCTCCAGATGCAGTGCTG
CCAGCAGCTTCGGGACGTCAGCCCCGAGTGCCGCCCCGTCGCCCTCAGCCAGGTCGTGAG
GCAATACGAGCAGCAAACCGAGGTGCCATCCAAGGGAGGATCCTTCTACCCGGGCGGGAC
CGCACCGCCGCTGCAGCAAGGAGGATGGTGGGGAACCTCTGTAAAATGGTACTACCCAGA
CCAAACTTCTTCGCAACAGTCATGGCAAGGGCAACAAGGGTACCACCAAAGCGTAACTTC
TTCCCAGCAGCCAGGACAAGGGCAGCAAGGGTCCTACCCAGGTTCAACTTTCCCGCAGCA
GCCAGGACAAGGACAACAACCAGGACAGAGGCAGCCATGGTCCTATCCAAGTGCAACTTT
CCCACAACAGCCAGGGCAAGGGCAAGGGCAACAAGGGTACTACCCAGGCGCAACTTCCCT
GCTGCAGCCAGGACAAGGGCAACAAGGGCCCTACCAGAGTGCAACTTCTCCACAGCAGCC
AGGACAAGGACAGGGACAACAAGAGCCCTATCCAATTGCAACTTCCCCGCATCAGCCAGG
ACAATGGCAACAACCAGGACAAGGGCAACAAGGGTACTACCCAAGTGTAACTTCTCCACA
ACAGTCGGGACAAGGGCAACAAGGGTACCCAAGTACAACTTCTCCACAACAATCGGGGCA
AGGGCAACAGCTGGGACAAGGGCAACAACCAGGACAAGGGCAACAAGGGTACCCAAGTGC
AACTTTTCCACAACAGCCAGGACAATGGCAACAAGGGTCCTACCCAAGTACAACTTCTCC
GCAGCAGTCAGGACAAGGGCAACAAGGGTACAACCCAAGTGGAACTTCTACGCAGCAGCC
GGGACAAGTGCAACAGTTGGGACAAGGGCAACAAGGGTACTACCCAATTGCAACTTCTCC
GCAGCAGCCAGGACAAGGGCAACAGCTAGGACAAGGGCAACAACCAGGACATGGGCAACA
GCTAGTGCAAGGGCAACAACAAGGACAAGGGCAACAAGGACACTACCCAAGTATGACTTC
TCCGCACCAAACAGGACAAGGGCAAAAAGGATACTACCCAAGTGCAATTTCTCCGCAGCA
GTCAGGACAAGGACAACAAGGATACCAGCCTAGTGGAGCTTCTTCACAGGGGTCGGTGCA
AGGGGCGTGCCAGCACAGCACATCTTCTCCGCAGCAGCAAGCACAAGGGTGCCAAGCTTC
TTCACCAAAGCAAGGGCTAGGGTCGTTGTACTACCCGAGTGGAGCTTATACACAACAGAA
ACCAGGGCAAGGGTACAACCCAGGTGGAACTTCTCCGCTGCACCAGCAAGGGGGAGGGTT
CGGCGGCGGGTTAACGACGGAGCAACCGCAGGGAGGAAAGCAGCCATTCCATTGCCAGCA
AACCACTGTCTCCCCTCACCAGGGTCAGCAAACCACTGTCTCCCCTCATCAGGGTCAGCA
AACCACTGTCTCCCCTCATCAGGGTCAGCAAACCACGGTCTCCCCTCACCAGGGTCAGCA
AAC