morexGenes - Barley RNA-seq Database

Contig contig_273548

Source Contig contig_273548

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_273548 (2522 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location

Predicted Genes from contig_273548

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43951	1	342 bp	AK249753.1	Available	Available	None

CDS Structure of MLOC_43951

Contig Sequence (2522 bp)

>contig_273548 2522 assembly3_WGSMorex_rbca.fasta
CATCAACCGTGTTCATAGTAACGTTTCCGCTTAACGATCTTCAACGGTATGAAGATGCTC
TTGCTCTCATTGCTAGCATATCCTAGATTGATCTTGGTGACACGTAGGAATATTTTGAAT
TATTACTACGTTCCCCAACAGGTTGCCACAACGTTGATCGGGACGAGTGCGCCGTGCATG
AGCAGTTCTTCGCTCACAGTGGGCTTTCCGTTGCACAACTTCATCCGCGGCCATATTAAC
CACAACGCCACTGAGAGAGTGGCTTGTGGCCACCCCTATTTCGACGAACATATTTATGGG
AAAACCGAGTAAAAACTGTAACCAGAAAAAAACATAAAAAGCTAGTAACCTGAAAAAGCA
AAAAAAGTAAGACAAAACTGAGAGCTCGAAGCATGGCTGCTTCACTCTTTTTTTTGGAAG
CACTCATTGTGCTTTTCTCTTTTTAGGGATTGTGTTTCTACCATTTTTGAGGAAGTGCAA
CCGTGTTTTTACTTTTCTTGAAGTGTAGTTAAGCAATAGTTATGCTTAACGTGGAAGCGT
ATAGTGTGCTTTCCTTTTTTATAGAAGCACAACTGTACTTCGCGTAATTAGTTTAATAGC
AAACCTAAGAATGATCAAGCAAAAGTCAAATAGTTGAAAATGAAAAAAACAAGCCCCCGT
CAGATGCATCCAACATAATAAGTGGCGACACTAAGACATGCCACATGGCGTGCTGGGGCA
CGCATGAGCTGCTCCCGGGAAGGGCCCCCGCCGATTAGTCATATTCAAATTAAATGTTAG
AGCATGGGTCCCTATTGAAAATCCTTACGAGCATTATATAGCTCGCTTTCAGCGATGCCG
AGGAAAGCCTCCTCTAAAGGGAGGTGCGAGATGAGCCGCCCCGACGTTTGGGAGGCCACA
TTTTTATTAATTTTTGTTTATACATTCAAACATTTTAAGTAAATATATTACAAAAGTAAT
TTACATAAATAAATGGAAAAAATGTTAACCAAGCATTTGAAAAAGGTTAAATGTGTATAG
AGAAAAAGTTTCACATTTATACAAATTTTATATACAAAGTGGAAGAAAAAAAGTTGATTA
TTATTTAAAAAATGATAATCAAGTATTTAAAAGACGGTAGTACTATACATGAAAATGTTA
ATCAAGCATTTGATTTTTTAAATGTGTACAAAAATGTTGACCATGTATCAAAATAAATTT
AAATTAGAAATGAAAAATGTTAACGAAGCATTTGAAAGTGTATATAAAAATACTGAACAA
TGTAATAATAATTTTTAAATCTTGTATTTGAATTATTCTAATAAATTTATAAAAATTTAA
GTTTTTTTACCATGTTTTAGTAGTATTAAATATGTATAATAAAATTGTATTAGTTATATA
ACTAAAATGTAGAATGTGTAGAAAAAACAGACTTAAAAAAAGATAAAATAATGTTGATCA
TTAATATTAAAATATTCTATGTGTATATAAAATATGTTTCTGATGCTTATGAATAGTGAT
GATGGGTACAGAAAAAAATTTAAAATGTTCTGAACAGAAAAAAAAAGCTGATAAGAATCG
ACAAAAAGAAATAAATAAAAATAAAAAGAAGAGAAATCAAAGAAAACCAAAGTATAACAA
GAAAGAATGAAAAATGGAAGAAAACTAGTAAAACACAAAAGCAAAGTCTTTCGCAAAAAA
AAACACAAGAGCAAACTAAATTTACAAAATAAAATCAGAAAAACCATCGACAAAAGGAAC
CAAAGTAAAAAAAAACATAAAACAAAACGGAAAAGGAGCAACAAAATCAGACCTGTGCAA
CCATTGTACTGGAAGAATGATAATCCGACCGAGCGAGGAAACACGTTAATGTTTTTCGCA
AAACAAAAGAGAGAAAATACGTTAATGTGCCGGCCCATACCTGCTAGCCGACCCGTGCGT
TCTGGTCGCGGCCTTCTCTTCCGTGTATCAGCTGGCCCTTGGGGTAGTTTCTCAAAAGAA
AAACACACAAAAAAGCTGGACCTTGGGTGACTGCAGCTCCACAATCATCCCCTGCCACGT
CACCGATCCGCACCTCCTCCGTTCCTAATCCAACGCTTCGCAACCACCATCCGCACACGG
ATCGATCTCCTCCCGCCGTTTCTCCCAGCCACGTCACCGATCCTCGCCTAGCCCTCTCCA
CGAATCAGACGTTCGTAACCCAGCATCCCACGGATCCGTCCCCAAGCCTCTCTCCGGTAT
AAAGACCCCCCACCGCTCAACACCCACCGCATCACACATCAATTCCCCAATCCCCTCCAA
TCTCACCCTCGGAGCAGCAGAGCCATCCAGCGAGCGTCGCCAGCCATGTCGGGCCGCGGC
AAGGGAGGCAAGGGCCTGGGAAAGGGCGGCGCGAAGCGGCACAGGAAGGTGCTGCGAGAC
AACATCCAGGGGATCACGAAGCCGGCGATCCGGCGGCTGGCTCGGCGGGGCGGCGTGAAG
CGCATCTCCGGGCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTCGAGAAC
GT