Contig Data
morexGenes
Links



Map Locations of contig_273528 (4629 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_273528

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43949 3 2428 bp MLOC_43949.1 Available Available LOC_Os03g47610.8, FRAME:+3, EVALUE:0.0, 13103.m05130 protein thiamine biosynthesis protein thiC, putative, expressed





CDS Structure of MLOC_43949






Contig Sequence (4629 bp)

>contig_273528 4629 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCTCCCCCGCCCGCCCTCGCCGTCAGCCAGGCTGTTCCGCCGATCCGGCCGCG
ATTCTGCGTCCGCTGAGGCGTCATGGCCGGCTTTTCCGCGGAGGTGGACGCGCTTGTCGC
GCGCGCCGCGGGGAAAATATCTCCGGCGGGCGGGAAATATCTGGCTCTCCGCCCGCCACT
GTTGCCGTCGTTTTCCCATAATTTTTGGCCCCCACTCCGCCACCCTCCACGTCCGGTTGC
CGCTTGTCCTTCTCCGCGGCAAGCTGTGGCCACCCGTGCTCCGGGATCCGCCGCACCCTC
TATAAAAAATCGCGCTCTCGGCCGCATCACTGACCAGGTGCGTACTCCCATCCCATCCGC
TCCCCCTCTCTCTCACTGTCAGCGACGCTTCCGGCCGCCCTCCCGCGCCGCTCGCCGGAC
CCGCCGTTTCTCAGGTGAGGCTCCTCCCTTCCCCGGTTGAGACTCGAGAGTGCGTGCGTG
CTGAATTTGTGGGAGACGGCTCCAGTTCTTGCTGGGCTGGGATTACGACTGTTCTAAGCG
AATTATGAGCGCGTCTTCGTTTGTACGTAGTATGCATCAGTTCAATCCATCCATTTCGAA
TCGTCCATGATGAAACGGAGATTAGTGACTGTGTAGTCGCAGAAACGGGCCAAAGTAGGC
AGTATTACAGGAACGTATGGTTCAGGCACAGCTAGCCTCTGCGTGTCGTTAGTTAGAACG
CATCAAAGTTTTCTTCCAGAAGAGCACAAAACGCATCAAAGCTGAATAGACACATCAGCG
CTGCACTGCTGCAATCTTTGGCATTTGCTGCAGGGATACGGCACCTCTTTGCCGAATCGG
TGCAGGATACGCGGCCAGAGCCGGGATACGCCCCCGATACGCCGGGGATACGCGTATCCT
CTGGTGTATCCCTTTTCTTCTGAATTAAGAAAAGGAAAGAAAATAGTAAATGGCCGGGAT
ACGAAGGGGATACCTCAGGGACACTATTAATTTAGTTGGTGATATCTACTGATCTATTGC
AACATATTGCCTGCCTGCATCTACTAATCTGCACCTTGAACAGGAAATGGCTGCGCTGCA
ACCGTCCTTCTCGTCACTGATGGCTATGAATAATGGCTGCAACACCATGAAGTTCCCTAA
GACTGCACTTTTGCCTGGTTTCGGTGGCATTTCGCGCCCTCAGGATGTGCAGGACAGGAA
TGCCAGCCTCACCTGTTCAAGGCCTAGGGCAGTCTCAGTGACTGATCAGTCAGTAGCAGA
GCCAGCAAAACCCAGGCAATCTAAACATACAGTTGATCCCGCTGCTCCAGAATTTCTGCC
GCTCCCAGCATTTGAAGACTGCTTCCCACGGAGCACCAAAGAATGCAGGCATGCTTCCTG
CTTTTGCTTCACCTAGAAACTGTACTGGGAGTGCCGATTTTGTTTTGCTCTAATGTATCA
GTTTTATCTTATATTTGCCATGGTTATGCTCTGCAGTGAAGTTGTTCATGAGGAATCAGG
TCATGCCCTGAAGGTTCCATTTCGGAGAGTCCATTTGACCGGAGATAGCGGGCATTTTGA
TACATATGACACCAGTGGTCCACAAAACATAAGCCCAAGGCTTGGTAACTCACTAGCCTT
ATCTCTCTTGTCATATTCTCTGTCCTGAACCATGTAGACTGCTTTGTACTAATAAGCCAT
AAAGTCTAGATCAGCTGTTCGGTATGAACTTGGATGGAACTACATATTTTTGTTGTTGCC
TTCAGTTGATCCAATTTATCCCTTGTTTTGTGTTAATAAGTCCATATTATAGTCAAATAA
TGGAGACTTTCATTGTTTCAACAGTCGGATGGTATTCAATGCCTGGTTTTGGAGTTGAAG
GTTGATTTTGGACTTGGAAAATACTCCCTCCGTCCGGAAATACTTGTCGGGGAAATGGAT
GTATCTAGACGTATTTTTAGTTCTATATACATCTATTTTTCTCCATTTCTCCGACAAGTA
ATTCCGTACGGAGGGTATGATCATATACCGGATATCTCTACAGATATTCTTCTGATGTTT
TCTTAGTTGTATTATTTCAGACTGTCTCATTCTTAAGTTTACCCTAGTAAGCACATTCGC
TGTGCTTTGTGGAGAGATTACCCATGCTCCTTCAGAAAAAAGTAGTTCTCCCCTGTATAT
TCTGAGTTAAAGTGTTCTAGAAGAAATCCATGGAAATGTATTAGGTCCATCGGAAAGTTA
GGTATAGCATAATAATAGAAATATAATTATTTCATTCGTCCAAATTAATAAAATATAGTT
TTTTTGTCAAACTTTTTGAAGAAGTTTTAAACTTTTGAATAAATTGTGTCAAGTTTAAAA
TTCAAGACATATAAGTTTGTTTGTAATAAGTATGCATTGAACTTTTACAGGACTCCCAAA
GATAAGAAAGGAATGGATTGACAGGAGGGAGAAATTGGGTAGTCCTCGATACACCCAAAT
GTACTATGCTAAGCAGGGAATCATAACAGAGGAGATGTTGTACTGTGCCAAACGTGAGAA
CCTTGCTCCTGAATTTGTCCGGTCAGAAGTCGCCCGTGGACGAGCCATTATCCCTTCCAA
CAAGAGGCACCTGGAATTGGAACCCATGATTGTTGGAAGAAACTTCCTTGTAAAGGTGAA
TGCAAACATTGGGAATTCAGCTGTTGTGAGCTCCATTGAGGAGGAAGTCCACAAGCTCCA
GTGGGCCACAATGTGGGGAGCAGATACAGTCATGGACCTTTCAACAGGGCGCCATATCCA
TGAGACCCGGGAATGGATTATTCGTAACTCTTCGGTTCCTATTGGAACTGTTCCTATTTA
CCAAGCACTTGAGAAAGTTAATGGTATTGCTGAAGATCTGAGCTGGGAAGTCTTTAGGGA
GACTTTAATTGAACAAGCCGAGCAGGGTGTTGACTATTTCACCATCCATGCTGGTGTGTT
GCTTCGTTATATTCCTCTCACAGCAAAGAGAATGACTGGCATAGTTTCTCGTGGTGGATC
AATCCATGCAAAATGGTGTTTAACGTATCACAAGGAGAACTTTGCTTATGAGCATTGGGA
TGACATTCTTGACATATGTAACCAGTATGATGTGGCATTATCAATTGGTGATGGCCTGAG
GCCTGGTTCTATTTATGATGCTAATGATAGCGCTCAGTTTGCAGAACTGCTGACTCAAGG
GGAACTAACTCGCCGAGCATGGGAGAAAGATGTACAGGTGAGAATAATAGGAATGAAGTT
GAACATGGAGTTGTTTCCTTTACAGTATCAATATTCTAATATGTACAGTCATGGTTTATG
TTTGTTTTTATTGCAACATGCAAGAATCAATAACAGGACGTTCTAAATAAGTTTTGAGTA
ATCAACCTTCAATATAAATGCTACTGACAAGATTATTAACTATGTTAGCTTGGTTTATGC
ATAAGATTGAAGATCGACAGATTATATAGTAAATGCAAAAGAACACTTTTATTAGGATAT
ATGTTAGCTGTTTATCATCCAACATTCCTGCATGTTTCATCAGTTAAAAACAAGATTTCT
GCACCGGTTCCTAATGGGTCAATTATTTTTGGAACATTGTATATATATGACCATATTGAT
CTACAGTGCATCGTAGCTTATCTTAGTGAATAAGCTTGCATAGAGATTAGTTGTCAGAAA
CCAACACGTGAAAAGATATAATGTTCGAAATATTGATTGTAAAGTGCTTTAAGTGCTGAA
TCCTTTTTTTTGTGCCCTAGTGACTCGACAGTTGAACTCTGACACTTGAACTTGTAACTG
TATTATGCTCTGCTTGATGAATTGTTTCTATCTGCTACTATGATATTCAATAGTTGAAAC
TTGGGAGTTGTCTTTCTGATGTTTACACTTCTTAACTTCTAGGTGATGAATGAAGGTCCT
GGGCATATTCCGATGCATAAAATTCCTGAAAATATGGAGAAACAGCTGGAGTGGTGCAAC
GAAGCACCTTTCTATACGCTGGGTCCATTGACAACTGATATTGCACCTGGTTATGATCAC
ATCACCTCAGCCATTGGTGCTGCCAACATTGGGGCTCTTGGCACCGCACTTCTTTGTTAT
GTAACACCAAAGGAGCACCTTGGGTTGCCTAACAGGGATGATGTTAAGACAGGTGTGATA
TCCTACAAAATCGCTGCTCATGCTGCTGATTTGGCAAAGCGTCACCCCTATGCACAAGCA
TGGGATGATGCACTAAGCAAGGCAAGGTTTGAGTTTAGATGGTTGGACCAATTTGCTTTA
TCCCTGGATCCAGTTACTGCAATGTCTTTCCATGATGAAACACTACCATCTGATGGTGCC
AAAGTAGCACATTTCTGCTCCATGTGTGGTCCCAAGTTTTGCTCGATGAAAATCACGGAG
GATATTAGAAAATATGCTGATGAACATGGTTACGGGACAGTAGAGGAAGCTGTGAGGCAA
GGAATGAGTGATATGAGTGCTGAATTTTTGGCTGCAAGAAAAACAATTAGTGGCGAACAA
CATGGTGAAGCTGGAGGGGAGATCTATGTGCCAGAAAGCTACGTAGTTCAAAAATAAGGT
CAGTTTATTGTGTATCTTGTAAAAATTGTCTTGCAAGTAGGAAGAGGACGCTCATAACCC
CCCCCCCCC