morexGenes - Barley RNA-seq Database

Contig contig_273247
Source Contig contig_273247
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_273247 (9722 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_273247

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43885	3	4282 bp	MLOC_43885.1	Available	Available	LOC_Os03g14250.1, FRAME:-3, EVALUE:0.0, 13103.m01666 protein plant protein of unknown function DUF869 domain containing protein, expressed
MLOC_43884	1	455 bp	MLOC_43884.1	Available	Available	None
CDS Structure of MLOC_43885

CDS Structure of MLOC_43884

Contig Sequence (9722 bp)

>contig_273247 9722 assembly3_WGSMorex_rbca.fasta
TCTACGCCTCAAGCGCCAGGGCACCCTCTACGGCTTCGGCGGCTAGGGTTTTCCTTTCCT
TCCTCGTAGAGGCTTGTTTTATCGAGCGATGCCTGGGCATCCTGGTGGTGGTAGTTTGGT
GTCGGATCTGGTGTTCCTGATGTAACCGTGCTCTGTTGCAGTGAAGTGAATCCTGGTGTT
TATTTCAAGAACGCCCCTTCTAATCAGAGTAATCCAGAATGCGTGCGCTTCTCTTTATGC
TGTGATTTCTTCTTTGGATAATTGCCCTGCTCTGGTTCTTGCAGTGCAGTGCCATGCCAG
TGTTGTTGTTCTAGAGAGAGCTGGAAATTATGCACGTTGCAGCTGGAAGTCTGAAACTGC
CAAACTGGCCATGGCTCTTCAACATGCTCGCAGAAGTAAATATCGGCGGTTCCTTTTTCC
CTTGTCACCCCTGCAGTTGGAATAAAACTCTGTTTGGTTGCCTGGTAACATTGCCAGCAA
TGTAAATTGGTACAGACTTTGTGTTCGTTGCGTTCTACTCCCTACTCCAGTGACAGAGAA
AACTGTATGAGTTAGTTTTTGCTGTTTTTAAAATTGGTATAAATTGTGTTCAATTTTTTC
TTGGGTATAATCTGTCTTTCCACCAGTAATGATGTAGGAGTAACTTAGAAAACACAAAGT
GGACACCAAAAATCTTTCTTCAGATTTTGACAATGAAACAGATATAAACACAATGATAAC
TGCTACAGTCAAATTGATGCAGGTTAACTTAGCTGTACCCGAAGCCAGTTTTGGCACCAA
CGACATACACAAACTGCTTCACAAGAGAATGAAACACAAACAGACAGCAGCTCTCTTCTT
CATGCAGGTAAGCACATGTACAGTGAGGTTTTAGTGAGGTTTCAGACAAACAGCAACCCA
GAAAAAACTCTAGCAGAAGATAAAGACAGCTAACACACACACACACTCTCTCTCTCTCAC
ACACACACAACCTGGTCATAACCGCTCGACTGCAAGGCAAGTATTACTCCAGCAACTGAA
CCACTGGAGGCATCACCTCAAAATAATACACAAGCAGGTTCGCCGAGTAGCCCTATAGAA
ACCCATGATCCGCGTTCATCCGTCATCGATCCATTCGCCGTAAAGAATCAACAAGCCAAC
ATCACAGAATCTTGCAATCCAGCTAATGTTCACTCTTTGCCCTTGGCGAAGAACCGACTA
AAGCCCCGGCTTTGTTTCTCGGGCAACTGGTTAGCAAACGAGGAAGAGGATGAGGATCGC
GACCTATGCTTTGGGCGCTTGGAACTGTTCATTGAAAGGGAAGGGCTTCCGTCCACATCA
GAAGGGGTCATATGGGTCTTGTATCCGTTGAGGGGAGACACATTCCCTGACTCCAGCATT
TCCTGGTCTGTATCATGATGGCCAGATGGTTTCTGGGCATACTCGCCTCCTTCGGTTGTT
CCTGCCGCGTCTTGCAAGAAGTCCTCCATTCGTTGCCGGGTTGGCGAGGCACCCATTGAC
TCTGCTGGAGGACGCATGGCTTGCAGTTGACGACCAAGAATCATCATGGTCTCCTGGCAC
TCTGCAAGCTTTTCTGCTGCAGCCGCTATTTCTACATCCTGCCATCGATTTAAACAAAAA
AAAGTGTGCTATAAGTGTTCTGCAAGTCTTGAATTTCCAGAAAAGATCATAGCTTTTAGC
ATTACAAATTTACAACCAATAGTCTGAAGTAATTCTGAAATGAGGTTATAACATATTTAG
CGTTTGCCGCTTGGATCTTAGTAGGATATCATTTATTGCTAACATATTTTTCATAGTTAG
AATTATACATTCAGAAATAACAGTGCTTCTACACCATCAACAACAGATGAACATAAGTTA
GTGGAACAGCGTCATCATGAACATGCAGAATTCACCAGTGAAACTAACATTACAGTGCAA
TCGTTATTGTTTTTTTGATTTTCAAAAAGGTTTTTTTTTCTCCCGATTTCTATTACCAGA
AACCATCAGTATAAGTCAACATTGCCAAAAGAAGAAAAACGAACCAAAAGGAAATACAAC
ATTCATCAGCCAACCGAACAGCAAAACTTAACACAGCAGGTCGCTCCAAAAGAGCTACTC
AGGGTTATAAATGGAAATATTGTGAATCTGAGAACTCTACTACTAAAATCACACACATTC
AGATGCGTGTTTGACAAACAAAAAAAAGATCTAGTACTTATTAGTACCTGTTTGGTTTTG
GTATCATCAACCTCGTCCACAGGCATTGAACTCTGCTCGTTTTCATACCTTCATATCACA
AAGTCAAGTGAGAAGAAAACTAAGCAGAGGCACGTATACTAACTATTCATAAATAGATTT
CAGTCTTACCTTTCCATCTTCTCTTCGAGATCTTTGTATCTGGCTAAGTCATCCTGATGA
CTTTGTCTTTCATCACCGAGTTCAGCTGTTAAAATCTCTATTTTGGACTGCAACACTTCT
ATTTCCTTTTCTAATTCAACTTTCCTTGATTCAAGAATCTTGTAGGATTCAACCATACAC
TTCAACTGTGTCTCAGCCAAGCTGTTTGAATTCTCACTGGCAGACAACTTGGATGTAAGC
TCTTCCAGGTTTTTCTCCATCTCACTAAATCTACACTTTGTATCTTCTATCGTTTCACTG
CATCTCACTAATTCTGTTTCCAGATTAATCTTCTCAGATTTAAGTTGCTCGTAGTCCTCC
AGTGAGCACATCTGCACTGCAGTCTTAACATCGAATCCAGCATCATTAGGCCCCACAATC
TCAGGATGAGAAGATGGATGAGGAATAAGTGGGCAAGGGCCAGAAGATGAATGGGGCTGC
ACTTTATTTTCAAGTAGTGTCACTTTGTCAACATAATCCAAGTTATTACTGTCTGCTTCA
TTGGTGCTGTCTCTCAACATTGTGAACTTGATCTCACTAGTTTCTGACAAGATGTGAGAT
AGGGTCAAAATGATGTCATTTATGACATTTTCATTTGATAGAACTTTCTCAACTAGCGCA
GAGAACTGCTGAATTTTCTCACAAAGCCCATCACAATCAGAAGACTGTCTTTGCTGCTTG
GACATTTCTTGATCAAGTGACTTGACGAAGTCTTGAATCTTCAAGACTGCATTTATAACT
TCTTGATCCATGGAATGCTTACTCCCAATGCTCAACCTCTTGCCTTGGTTCATTAATGAT
TCACTTTCAGAAACTTCAACCATCTTGCTTGCATTCATTAAATCTGCCTCTTCCTCAATA
TCCTTAAGAATATTTCTGATACTGTTTAGTACCTTCCCAGCATTGTTCTGTGGTGATTCA
GAGTCCAGCAAGGAAGATAATCTGGACTGCAGTTTCAAGAGTGGAGATCCCTCGGACAGC
TGCTGTTTACTAGATGGAGTTCCAGGCAATGGTACTGATTGCAAATCTTTAACACCATCA
CTCTCAGTAAGACCAGATACAGCAGCCTCAGCATCAACGACCTTTATTTTCTCAACAGTG
TTGTCATGGCCATTGGCTTCAGAAGGCAAACAAGCTAGTCTCTCCATCTCTAGGAAGTCA
TCCATCAGTTCCAACCGATTGGAGCCATCAGTCACACTGCTCTTAGCTACTTTATCTTTC
TTGATGTGTGAGAGCTCAGATACCAGAGCATTGGCCCAAGACTCAGTACAACTGCCTTCA
TCATCAACACCATCTTCGGACATTGAAGTCATACTAGGTGGATTGCTTCCATTTTGACTA
TGTGCACCATCAAAGTGGATATCCATGTTTGGGTTTGATGGACTCTTACGTTGGTTACCA
GTCACCATTTGAACTTCCAAGGTGCGAAGCTTGCCTGCTATCTTAGCGTACATGGTTCTT
GAAGTTTGTAGCTCACTGTTCCGTTTTGTCAATGCCTCTTTCAGCATCTTGGTTTCTTCT
TCCATTGTTAACAAACGTGCAGTCAGAAACTCATTCTCCTTCTGCATGTGTTGCAGGTTA
TCAAAAGCATAATCAGGACCTGGAGACATAGGGGACATAGGACGATGGAAGCTATTATTC
TTTGCAGGGGATCGTCGCAATCTGTTGTCTCCATAATCTCTGCCCATTCCCAGGCTCTCC
ACTTCCATTTTCATCTGAGCTAATGCAGCAGGGCCTGGTAACTTTTTCCGAACAAGACCA
CGCAATCTCTGGCATTCAGCTTCCAGCTTCGTGATTTTCTTAACATCCTCCAGGTGCTGT
TTAGTTGCTACATCAGCTGAGCGCACACTCATGTTCTTTTCTTCATTGCGGATTTCAAGC
TCTTTGGTGACAACATGTACTTCATACTTCAGCGAATTTATTTCCCTTTCACCTGACTGA
ATTGTGCTTTTCAAGACTTCAATTTCAGCTTCTGCTTGAGCCTTTTCCTCATCAATTTTC
ATCAACAAATCTGCCCGCTCTTGGAGTGATCTTGAGAGTGCATCATTCTCAGCACCAGCC
CTTATGAGCTCATGGTCAAATTCAAGCAACTTTTCTTCCAACTCGGCCTTTATCTTCTCC
CACTGTTTGGTTTTCGCAAAAACTACATCATGTAGCTTCTGCTCGCCTTCTTCCTTCACA
GTTCTTACTTGCTTCATGCATTCCTTTAGAGCACCATCCAGATGGGCAGCTCTTTCCTCA
GCTGCTAGCTTAGACAATGTAACAGTCTCTAGCTGAACCTTCAGCGCCGAGGCCTCTGCT
TCAGCTTTCTCCCAGCCTAACATAACAAAATATACATACCACCAATAATATATTTATTAT
AATCATTTCATAAAAGGAGCACAGATCACTGGAGAATTTTTTTTCTTCCTACTAAAGTAG
AATAACATTCACTGAAAGGTTTATGGAAAATGAGGAAGGTCTAGTAAAAGACAGGAGTTA
TAGAGAGTAAATGATTCTATTCAGATACAAAAAAGAGAGAATGAATATAGAGTTCTTTCA
CACACCTGATACAGCTTCTTCAGCAACTTTAGCATGTTGTTTCACTAGGGCATCTTTGGT
AGTGATCTCAGATTGTGATGCAGACAGTTTCTCATTCAAGGTTTTCACCTTTTCATCCAA
GACCTTCACTTGTTCTTCAGAATCAGTAAGATGTGCATATGTTTCTGGTGAAATCTGCAC
AAATTTCGGAACTTTATCCTCCTGCAAAATAGAAGTTAATTTTAGAAGGAAACAAACATT
TTCATACAGGTTTGAAACACAGCCAACACAAGACACTCATGTAGGGAAAATAACTAGCTA
AATTTTTTTGGCTGCAATGGCAGCAACTTGAGGCAGATCATGCACAATCACTTGGTAAGG
ATTTTGTTGTTGTTGGAAATGCCAGCATTTTATTGATTCTTCGCAATGTATCTAGATTAT
ACGAACACAATAGTGTTTAAATTTAAACCACTGGTTAAATCATAAGAACATCTGTGCTAC
TTAAATCGTGAACTGTTAGCATTAGCTTTGTCAATCAGGAAATTTGAGGACAGACGGTAC
TACAGAATGACATCATTGACATTTAAACAAATCCAAATCAAAAGAGTACTGAAGTCGCAA
ACCTGTTCTGCTTGATTAGAGTTCTGCAAGACATCTGCATTTGAGGATTTGTCCGATGAT
TTCTTCTTCCACGGCCAACTACGCCGGTCCATCTCACACAATGTATCTGATCAAAGAAGG
TAAATATCTGTAATCAGCGAACCTAATGCAACAAACTTGCCCATATATATATCGATTATA
TACAAGTGCGTTGTTAATAGTAACTGAATTTGAGTTTGTTTGTCAACAACTACGATAACA
AAACGAAGGCAACGGTAGACAGACATCAAATGAAATGTATCATTTGAGAGCAGACAAATG
AAAAAAAGCATCGTGGCAAGGAAAAGCTCTTCTTTCACATCCATACAAATTTCAGCATTG
ACAGTACTTGCAAGTACCAAATTTGCGTATAAAGTCATACAGCAAAATAGCTGTTGTTGA
GCAAGTATTTGACTCTCACTCTCCACCGTTGTCACTATATGGAAGTCCTGATATGCACGG
TGTTCCTTACAACTCAGGTTTCCTACAATGAGATGACAGACTGGCGCATGTATCCAAACT
CCAGCAGCATAAGTTTTTGTAGTATTGCAGCTAAAGGCTAGAGCCATAGAGGATAGTGGA
GTTGACGAGGAAAGCCAACAAAATACATCACAAGCCAATTCTTAAGAAGAGAACGCACAA
AAAACCAACACAAAGTATCAGACAAAATATGCTTATATACGTAACGTGACCAGCAAACTA
AAATTCAGTAAGCAAGTATTTGACTCCACCATTGTCACTAAGCCAATTCTTAAGAAGAGA
ACGCACAAAAAACCAACACAAAGTATCAGATAAAATATGCTTATATACGTTACCAGCAAA
CCAAATTCAGTAAGCAAGTATTTGACTCTACCATTGTCACTAAGCCAATTCTTAAGAAGA
GAACGCACAAGAAACCAACACAAAGTATCAGACAAAATATGCTTATATATGTGACCAGCA
AACCAAAATTCAGTAAGCAAGTATTTGACTCCACCATTGTCACTACATGGAAAACGCTAC
CAGTAATCTTTTTTCTGCGCGCACATAAAACCTCCATAATTCACACTGCTAGCAAGAATC
CCCAATCCGCACATAAGGTCATACACATAGAGTGGGGCACCGGTGGTTGGGCAAGTACAC
ACTTCAGTTGAGATCACAATCGGTCCACCATACATGGTATGCACAGTAATACAATCAACC
AACCACTCACAACCAATCCACAGAAGAGATCAGCCCAAGGCACGCAACGACATAAACCCC
ACGTACCTCAAGGCTCCGGCCAGCATCACATATTCCATTCGGCAAGATCCAAAAGCCGGA
GCCCGCGTCACAATTCAGACAGCTAGGGCTTTATAGGATACTAAGATAGGACCATGGCCA
ACAAGGAGGAGGAGGCCAGGAGGGCAAGCAAGTAGGCCAAAAGAATTTCCGATCCCGTCC
AAAGCAGCAGCAGACGCGGTGCCCCCCACCCGAGCGGTCAAGTTGCAGCGGCAACAGCCG
ATCCGATCACCGTCACGCCAGAGCCAGGCCAGGGCATTGACGCGGGGCAAGCAAAGAGTC
GTGTCATGTACTCCTACTCAACAGCCATGGCTCATCTCGTGGCTGTGCTCACCTAACTGG
GGTTATAGCTTAATTAAGGCAGCAGCAGTATCTCTATGCATGGACCATGGCGCACGCACA
GGCTGTAGCGCGCGGGGTTTGACGCGGACGGGCAGCCTCGGTCTCGGCAAGCGCGGCAGT
TAAGGGCGGCACCAAAGACGCCCGCGGGAGTAATGGCCGCCGCATCGAATCGAATGTTTA
TTTAAGCCCATGCGGAGGGGGGTTGGGCCGTCGCCGGAGGGACGGGATGGCCGGACGACC
TACCTCACCTCGCCGCCTCGAGGAAGAAAGTCCGCTGCGCCCAGCTTGAACGGGGAAGGT
GGCCTTGGCTATAAATGGCGCGCGTGAGCCGGAGTGAAAGCCCAGAGCTACCACAAACAC
GATACGGGCCATTAATGGCGGTGCCCCCTCGGTTGATTGGATTGGATTGGATTCTAACCA
GATGTGCCACTCGTATTAAATCCTTTCCTTGCAGGTTCTAGTTCTACACTTCTACCAGGC
GCGTCCATTTTTACCGTGCCCTTTTACTAATCTTGCAGTACTAGTACGATCTCTTCCCAC
TAATCTTGTAGAGCAGTACTTCCGGAGTACTGCCAATGATTCAAAATACCACCGGAGGGA
AGGAAAAGGAAGGAAGGAAGGAAGGAAGTCGTGGCCGTACTTCTTGTTCGACGCTGTCAC
GGGTAAAAATCTGTACTACCGTGTGCGGGGTGGCAATTCCGTTCATTCATTCACTGGATG
GGATGGAACGGAAGTCTTGGGACGAAATCATATGGAGAAGACAAAACGCGAGCGACCGCA
ACACGGCGACTGGACTGATTGATTGAGCTGGCGAGAGCTATCGCCAAGCGCAGCAAACAG
TTGGCGACGAACCGAGGACGCTGTGTGATTTCATCACTGGGACTGGAGGAGAGGACTACT
ACTAGTGGTATGGTTTCATTTCATAAGAGACAAGGAGACACGCGCCGGGAAGTCCGGGAG
GCCGAGACGAGCGGCGCCAAGTAAACTGTAACGGAGAGAAAACCGGGCCAAAGCAGTGAA
AATCCATCCATCCATCCATCCTTCCGGAGAGCTCGGCTTGAACCGAGGAGGAGCTTTTTT
TTTTTTGAACGAACGAACGAACACTATTCGAGGGAGCTCCTGAAGAGAACCATCGCAGAC
GATGCAAGGCTCCGCAGGAACAACCCAGAAAAATCCACACGCCATTGCACGGCGAACGGC
AAGAGCAATCGCACCATGGCGACGGCGAAAAATACAGGGAAACAGAGAGAGAGAGAGAGA
GAGATGCAGTATGCAGGCATGGAGCAGAGAGGGGGAGCGGGGACTTACGGGAGGGGAGAG
GGGCGGCTCAGGCAGGCCCTGCGCGGAATGCAGCGGATCCGGCGGGGTGGCGGGGGCGCC
CCAATTCCGGCGGCGACTGGATCTGGCGGCGCGCCGCTCCGATCGGCGGCGAGGGGGAGT
GTCGGTGGCGGTCGTCGGTCGCTTGCAGCGCACACTTGTTCCAATCAATCAGGCGGGGGC
GCTTTAGCTGCTGGGCTGGATTGCGCTGGACGCCCTCCACCTCCACCTCCTTTTACCCCG
GACCTCGCCGCCGCCCCCTTTTTGCTCCCCGCGCCTTTTGCCCCTCTGGAATCGCACCTC
CTCCTCCTCCTCCTCCCCCAGGCAGCACGAGGCGACCTCGCCAGTCGCTGCTGCTCCTAG
CTCGTAGCTGCTGCCGCCGCCTCGGCGTGCTCGGTGCTCCTGGTTCGGTAATGCAGCTCT
GCTCGCGGCCCGCTCCTGGCTAGCTAGCAATGGAGCGTCGAGGCTGTGTGGGGGAGGGGA
GGGGAGGGGAGGGGAGAGGAGACGGGGTGGGGAATGGAGGTGCGGGTGCTTTTTGTTATG
GGGTGCCGCTGCTGCCGGTAGGTGGGCTAAAAAGCGGGGGCGACGGCAGGGGAGGGGGAG
GAGGAGAGGGAGGAAAGTGGCGAGTGGGGAAAAGCGGGGAGAGTGATGTGCTGCGCTGTG
CTGTGAGAGGGAGAGTCCAGGGGAGTGATGGCAGCAGAGAATTACACGTCAACTACTAAT
ATCCTGCAATAAGGAAAAAGAAATCGTACGTCATGATCAGACTTGCTGCACTGCCTTTTT
TTCCTCATCAAGCTCTGTCTATTTTGTTTGATGAAAAAAAATCGTTCTGTATGTCATGAG
AAAAATCACGGTGGTCGCAAAAAAGGGGAAAGAAGAGGAAATAACACTATGAGAGAAAAT
TGTGGCAAAGCGCTTGACGCGGAGGGGCGAATATATGACGTCAAAACGTATTTTCTCGAC
TAACTTAAAGGCATGACCTATATCATTTTAGATATATAAGAAAATGTAGGTATTTGCATT
ATTTGTATTGACATCACATACATTTATGTCGTCGAATTGCTCGTTTCGACCACGATCATT
TATTGGATATATACCTCTTCATGCAACCTTTTTATCCAGACCCTAAAAGCATCTTTAACA
ATCCGTATGTTCAATCGTTGGTATAAATGTCCACATCAACAACCAACAGCACATCATACA
AGCTCTTCAATGGAGTGTATGTTAATCGTATGTAAAATAACTAAGCGAGTCCACTAAACA
TG