Contig Data
morexGenes
Links



Map Locations of contig_273177 (3224 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_273177

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43869 1 666 bp MLOC_43869.1 Available Available None





CDS Structure of MLOC_43869






Contig Sequence (3224 bp)

>contig_273177 3224 assembly3_WGSMorex_rbca.fasta
ACCAGCGACCCCGGGGCCAGGCCGGCTGCGGGTGCCTGCGACGACAACGGAGAGGAGGGA
GGGAGGGGGGCTAGGGGAAGGGGAGACGGGCGGGCGATCGCACGCGGGGGCGACGCGGTC
GCGGGAGAGGGGAGAGGGACCTTATCAGTTTATAATGATTTTAAGGGTATCAGTCTAAAT
GTAAAGAGACCAAACCTACTAATCTTCTATTCTTAAATAGTTGCAACCCACTACCTATTT
TTCCTTCTCATGCAACCATGTCACATCATCAAGTCATGCATTTAGTCACAAGTACTTATT
TTTCCTCATGTAACCTTGCCACATCATCAAGTCATGCATGTGGTCATAAATTATAATGTG
TGTGCATTAATCTACACATTGTTTCACTAATTTTTGTTATGGAAATAAGTCGTATATACT
TTAGAGAAAATTTATATAGATCATATTACACTTTTTTTACGCATCTTTTGTCAGATGCTT
CATATGAGTTATTGTTTTTAAAATATAAAATGAGAGCAATCATCCTAATATTTTTTAGCA
ATAGTTTTTGTTTTTCAACACCTATTTATACATCTGTTTATCATGTTTCCCGTAGCAACA
CGCAGGGCATCATCTAGTACCATTAGCAATCACCATTACAAACTAATCAAATTTAACCCT
GAAATGTAAGGTGCCAATATGGTAGTGAATCGTTCTTACTAGTGTTTGAAGGTCCTGAGT
TGCAAAATGTATACAAGTGGTGCTATTTTGCATGTTCATCAATAGCCTAAGCTTGATCGA
TTACGAAATGAAGAATAGGGTAAGCAACATACAGTTTTCAGACTGTCCTCCAGATGTAGG
TACTAACTAGCTGTTTAGATATCACTGTACTCGCTTGACCATTTCAAGGCTGAAAGCCTG
AAATCTCCGCATTCAAGTTATCATAGATTCCTTGGACTGCATGGATTTCTGAAAACAAAC
ACAGATCTCCTCGACCTTTATCTATGCGCCTTTAGCACCATAATGTGCAGTGTATTTTCC
TATCGTCTGGCTCTGGATGTATTCAGTTCATATGCATTTTCAGCCAAAGAAAGAAGATGA
TTGAATGGTTATTGCAATTCAAGAAGTTGGTTCAGGTAGTCAAAATCTGCTTTCAGCCGA
AGAAATTAGCTGACTCTTACTGAAATTTAAAAGGATGTGTCACATAGTCAACATCTATTT
TCAAATTTCGGGCAAAGATATCAGGGTACCTACAAGTTGTTTATATACAGTGACATAGGA
CTCGTTTGATCACTTGAAGACTGAAAGACTGAAATCTCAGCACTCGGACAGTAATTAATT
CCTCGGATAATGACTACATGGGTAGTTGCAAACCAAACCCAAACACCGTCAACCTATTGT
TTGCATTTTGCACCTTCAGGTCCACACTGTTTCATGTTTCTCTATGATGCATTCAGTTCA
TATATCAATTTTTCTGCCAAGAAAATCAACTATGTTCTTACCACCATTAGAAAACTTGGG
TCAGGTAGTCAAAATCTGATTTCAGCCAAAGAAACCAGCTGCTCCTTGTCATAGTTCAAA
AGGTAGCCCGTTAGCCGACATCCACTTTCAAAAACAAGCAAAGAAATCAGCTGGTTCTTA
TCACATTCAGAATGTTGTCAGACAGTCAACCCCTATTTTAGACAACAGACTGCGTGTTTG
GCTAGAATGAGTAAAGGGAATGGGAGTTTATATGTTGGAGTTTAGGGGATTAGGCGTGGG
AAGTTGAATTTTAGTCCCAATCCCATGTTTGGTGGGAATTAGTAAAGGGAATTTGAAAGA
AAATAACTTCCCACGTGAATTAATAGGGGAGGCTGGGAAGAGATATGTGGGAATTGACCT
CCTTAATTCCCTTTCCCCCATCCCACCTCAATTCCCTTGCCCCCCAACCAAACAATGGAT
TATATGTCACTTATCCCTTAAATTCCCATTCCGTGCCTCCAATATCCCCGAACCAAACAG
GCTGAGGCTGGAAATCAGCTGATTCCCATCACAGTTCAAATGGTCAAGGTCAGCTACTAA
GGTCTCGGTAGGCGGCTAATTTTATTTTATTTTCATTATATCTAAAAAAAAAACAGGACT
ACTAATTCGTAGCGCATCCGAGTTGCAACCGATTCCACAAAGCTGGTATGAACTCCCAAA
TCGAAGCTGTGGCTGATCATGACAGCTTTTGCAAAGACACGGGGAAGGAAAAGCAGATCT
GTACCGAGAGATGGCGGGAGCAGCAAAGCAGGATTGGTGCGGGGCGGAGGCGAGCACGCG
ATCCCAACTCCAGGGCCCCGCCATGGCCGCGGCCGCGGCCGCGTTCCAGCGCCGCAGCAC
GACCGCCCCTCGTATCCCGCGGTCAGCGGCGAGCTCTGCTCCAATCTGTGCCAGAAGCTA
GAGGCATGCGGCGTGAACCGAAGGAAGGCGGCAACGAGAACGCAATGCACATCGGGTGTT
CGACGAAATGGCTCCGTCGAAACAGGTTTTGGGTTGGGGCTCGTACCTGCGCCGTCGCTT
TTGCCGGTGCAGACGAGCCGTTCTGTTCTCCGGCTGCTGGGCGGACCACGGGACCGGTGC
CTGCGGATGTCATTGGACGGATTTGGGATTGGAATTTGAATCAGCTCGGAAGTGGGTGTT
TTGCAGTTCAGAGACGAAAATGTGGGATTGGTTCAGAAAAATTCAGAGACTGAAGCCAGC
GCAATGGGTTTGGTGGCAGAAATATTCGGTGACAAACATTGGGGAAAGTTTGCACTATGA
ACAAATACACATCAACAGATCAAGAGATTGAAGAAATGCAGTGAAATACAGAGCACGATG
ATGGGGATTAAACAGCTCGAAGGTTTTTCACAGTCCAGATACTTGAACCAAACCAACAAT
ACAGAGAAATACAGAGCACTACGATGGGGAATCAGACAAAGCCATGGGCATGATAATGCG
AAATCATCGAACGCACCGGAGGAAATTCACATCGTTCACAAATGAGGATCGATAGCGCAA
TGAACACCAGAAGGATTCCTGGGAGAAAACTAGTACTGCAATTTCCATTCCAAACTTGAC
CCAGTACATCCCAACAACAGCAACATCAGCTCACAAGACGCGAGCAAACACCAGCAAGAC
ACTACACGAGGAACGACGAACCCTAGACTGGACACGACTACCCTAGCGGACGGCGGACGT
CGCGAGCGGGGCAGGGAAGGCCTAGCCTCCGAAGCCGTAGAGGG