Contig Data
morexGenes
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Map Locations of contig_272892 (5097 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_272892

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43828 1 996 bp MLOC_43828.1 Available Available LOC_Os07g13530.1, FRAME:+1, EVALUE:9e-111, 13107.m01406 protein ras-related protein, putative, expressed





CDS Structure of MLOC_43828






Contig Sequence (5097 bp)

>contig_272892 5097 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCGCCCCCCCCCATTTCGGCGCCCCCCCACGCTCCGCCGATGTTTTTCCGATC
GTCCCGCCTCTGATCGCCCCGCTCTCTCCTCTCTCGCCAGCTCTGCCGCCGGTTAGGATC
GGGGCCGGGGGAGCGCGATGGCCGCGCCGCCGGCTAGGGCCCGCGCCGACTACGACTACC
TCATCAAGCTCCTCCTCATCGGCGACAGCGGTGATTCTCCACGCTCCTCCTGCTAGATCT
TCCTTCCGGCATGCCTGTCTCGATTCGCTGCTCTGTTTCTGTGTTTATGCGAGCGCCCAA
TGCTTCGCGAGGGTATGATGGTTGTGTGTAGGCTGGCTTGGTTGCTCGTAAGTTACAGGT
TGATGGACTGGTCGTTTCGGTAGCTTTGTTTTGCTCCCAGCGGATTGATAAAAAAGCCTA
AGCCTAACCGTCACTGCTGCGAGGAAGTCACCAGTATGCTCTCCCTTAGTTTCTTGGTGA
AGTGCTGGCGAGGGAGGGATTGCAGCAGCCGGAGCCGCTGCTCAACACAACACTACTCTG
GAAAGTGGGAAACTGAAGGCGATGATATAATCAAAGCTATAGGTGGAGAACCTTTACAAT
CAAACAGAAGAATGGCTCTGACTAGCGACATGCTACCGTCTACAGTATTTTGTGTTGTTT
TCATTTTGGTTTGATAGATGTTTGGTTTGCTGTCTTCAAAACACCGCTGTTAGGTTGTCT
TCAAAGCGTTCGTGGTGTTTGTGAAATGATATCCGTTGCCCACTGATGTGTTCCTTTGCA
TGATTTAAGGAACCTTGTAGAAGAGGTGCCTTTGTACTTCTGCAAGTATAGCTCTTTCAT
GCTTTACCAATGCCACTATCTAGTTGTTCCCAAGGTCCGCATGATATACTCGGCTAGCTT
GCTGTCACACTGTCTAAGCATGTGTACATGACACCAATTCACTTAGTCGAGTTTCGTACC
CAAGTGCACGGGACTGAAAATGGGAAGCTTGCTGTAAGAAAGTACAATGGTCCTGTAAGA
ACCTTTAATCAATGCAATTTAGTGTAGAGTGTAGACTGTAGACACATTGAGCAGTCAAAG
CTGTCTTGATGATTTACTCCTTTCTGGATATAATTATGTGTGTATGAATGGTGGCTAGTG
AGAAAACTATTCAATTGTGAGCTATGAGGACATACAATCAGCATTGTTACTCGTCATAAA
ATAATCACATACTCGAGTATAATGTGCTTAGATTAAAAAAAGGCGTTCAATTTTGGTGTG
ATGTGTCGTTGTACTCTATATGAGTTCCTTGTGTGGCCCAGTTCTTTTGGCCGATTCTCT
CAGGATCTTGAGAATCGGACCTCCCCCCAGATTCTACCAGAATCATGAAGCCATATCTTT
TTGACAATCCTAGCTATTTTGGGAGGTACGATTCCCAAGATTCTGTGAGAATCAACCAAA
AGAACTGGGCCACATCTCTTCTGGTGGTATATGAGTTTTGCACTATTTGACATTTACATG
AGTGGCGAAATATAATGGTTAGTAGGCCAGTTCTCATAGGACCCATGCTTCTCTTTGTGG
CTTTCTCAGTCTTGTATTGATAATTTATGACATACTTATTCACTCTATTCTTTTGCCAAC
TCACTTATTGGAGCTCTTCCATTTTTATTCTCATTATCTAGGTGTTGGCAAGAGTTGCCT
CCTCCTACGGTTCTCTGATGGCTCCTTCACTACTAGTTTTATTACTACAATCGGGTATGT
TTTGTGTTCAGAAGCTTTCTAGTTTTCATCATAGGGACTGTCAGAGTATCAGCCCTGTTT
GTATGAAATATTTGAGACCGTCTGCCCTTCCTTGTTTAAAATCATTCCTATGTGCAGTAT
TGACTTCAAGATAAGAACAATTGAACTGGATGGCAAGCGCATTAAGTTGCAAATTTGGGA
TACAGCTGGTCAAGAGCGATTCAGGACTATCACGACAGGTGCAATTTTGTTTCACTCTGT
GCTAGAGACTAGTTCTATGAAGCTTATATGGAAATCCTTTTCTCAAGTGAAGTTAATTTT
TCCTCAGCATACTACCGGGGAGCCATGGGAATCTTGCTTGTTTATGACGTCACGGATGAG
TCATCTTTCAACAGTACCGTCCTTCAGTACACTCTTCAAGATTCAGTGTAAATAAATTTG
CTAAAGTTTTCTTTTTCTTTTGTATTGACATTTGAGTTTATTTTTTAACATACAGACATA
CGGAACTGGATACGCAACATTGAGCAACATGCCTCTGATAATGTGAACAAAATTTTGATA
GGCAACAAGGCTGATATGGATGAGAGTAAAAGGGTACTGATCTAGGCATCCTCCCTCTAT
ATGTTATCTGCTGTTCTTATTGTCTCTCCTAGTGAATGCATCACATTCTAGAAATGTACA
CACTTCAACCCATATGCATGTGGAGAAGATTATAGTCCTCCTTATTAGGCTACTTATCAC
CTTTGGAAGTTGTGTCTAACAAATGGCTAGCTAAATGTAGGGTTATGCAAGGAAACAATT
CTGTGTAAAGTTATTTCAAAATGGTAGAATGACATGCATTCAGGAACCAAGTATGAATGC
AAGAAGGAATGGACGGAACAATACTCAGAAGCGTCTTCAAAGTGCAGGCTGTTGTTCATT
TGGTATCATTAGCTCATAGCTCATTATCTGTGCAGGCTGTTTCTACTGCAAAGGGACAAG
CACTAGCCGACGAATATGGCATCCAGTTCTTTGAAACTGTAAGTTGTTGTGCCGAAGGTT
TGATCTTTTCACTTGTGAACTTTCTTCAATTTTACTTTGTGCTGCATCTTTCAGAGTGCG
AAGACAAACCTTAACGTGGAGCAAGTTTTCTTTTCCATTGCCCGGGATATTAAGCAGAGA
CTTGCTGAGACTGATTCCAAGCCTGAGGTAAAGGTCATACCGAGCATTATTCCTATGTTG
ATTTGAACTTTGTTTAGATTTTAAAAAATTATGTTGATGCTTACAGGACCGGACGATCAA
GATCAACAAGACAGAAGGTTCCGAAAACCCAGAATCTCAGAAATCTGCTTGCTGTGGCTC
ATGAGGAATACGTCGACTTCACTATCATGGGCTATTTTAACTTTATCTGTTTACTGTCAG
CTTGTTATTATAGGAACTGTAAGACTCGAGGAGATGACTATGTTGTGGTTGTTCTACTTG
TGTTACCTTGTATTCTTTGCAGCAGCAACTATTACTTTTAATGTAGTTTTGCAAGTTCTG
TGTGTTATTGCATGATGTATTGCCGTCGTGAGAACCATCCACTTTCTGCTGATGTAACTG
CATTTTAGGTTTTCTATCTGTTCAGTGCCATATTTGTGAAACTCTATTGAACTCCATTTG
TGCATCGTGCTACACTTAAGTTGAATGATGCACTAGCCATGGACAACTTTTCGCTAGGCT
GCTTTCCCTGATGAGCACCCGCCGTCCTTCGGTGGACAATGAATCGTCATAATCATTTGA
GCAAAGCAAAATAGTTTCTGAGGAAGTTTAGCTTAAACACCCTTTTCTGTGAACATGCAG
AATGCATAGATTGCAAGCAAGTCAGTAATATTCCATCACGCATACTGTGTTAGGCTACGC
CAACTTGGTTCTTTTCTTGCATCGTAAATGGCTGGGAGTTTGTCTTGAATTGTCAATGAA
AAATTGACCACCTGGGCACCTGGAATGCTGAATGCTGAATGTATGTTATGTGTGCTTGGA
TGATTCCATGGACTGCTGTGGAGCTTGTTCTGATCTACTCTCTCTGCTTATAAATATGAG
ATGTTGTAACCTTTTTTTTGTAAAATTGGATACATATAGACATGTTTTACTGTGTTTGTT
CACTTATTTTGGTTTATACTTAGTCCGTATTAAAATATCCAAAACAATTTATACCATTTA
TAAACGGAGGGAATATCTGTTTATGCTTGTTTAGATGTGCCGGTGAGAAGTTATAACAAA
GCGTCTTTCAACTGCTGAATGTTTGTTTCCTTTTTGAGATCAGTTTTCATTCATCTGCTA
AGAATGCAATGCTGACGTTACACGTTGTCATGCTGCTGCAAGCAGAATGGGTGGACTATG
CCGTGTTTATTTATTTGACTGTAATCCACTTTGAACTGCCTGTGATTTTTTTCTTGCCAG
GAAATAAAAATTGAAATGTCTGTGAGTTGACTTTGTTCTGAAGAAAATGTTAGCCTTCAT
TAGTAGGAACAGAAACTTTATGAAAATTGACTTGCTGAAAGAAAATGTTAGCCTTCATTG
GTAGGAACGGCAACTTCCTCTGATACTAAAAGAAGTAAGTGTTATCACATGCATGTGAAT
AAAGAGGAATATTTAGTTGTCAAAAAAACAAGGAACATAAACTTTATGAAGAATGACATA
CTTTTCGAAATGAATAGCATGGTAAGCAAACACTATTACAAGTTTTCAGCATGTAATTAT
TCAAAAGGCCGACCATAAGTGTGGTAAATTTCATGAAGTATTATTTACAGCAAGGAAATA
TACAAAAGTTCATGTTTGAACATCTAATGAAGGAGAGAGAATCCCAAATTTACAAAAAAA
ATCGTAACAGGTCTAGAATAAAAGTATAATGTAAATAAACCAATAGAACGTTTTAGCAAG
GAAGCAATTAGGAGCCACGAGCATGTGTACGTGCGAGGAACACCAGCGATCGGAAGGATC
AGAGGGAGCAGTCTAACATGGCGAGCGCCTTATGCACACCCTGCCCGGCAGCGGCGCCGA
GCCCCGCGGCCGCCGCGCTCCTGCACTTGGCGCAGTTCTCCGACGGCGTCAGGTTGAGGT
CCAGGCAGATCCCGCCGGCGTCGCACGATGGCGATGCCACGACCATCTCGGGCGCCGCCG
CCTCGCCGGTCGGCGCTCTGGCCTCGACGCGGTGCCGGCGCATGTGCCCGCCCAGCGCCT
GTCCGACGGCGAACTCGAGCCCGCAGACGGGGCACTCGTGCGCCCTCGGCCTGGCCGGCT
GCAGCGGCCCCCGGCGGCCGAGGCAGAGCGCCGCGCCGTCGTCGGCGGTGCCGGTCGCCC
GCTGCCGCGGGCGCGGCCGGGGGCGGCGGTGGCGCCTGGGGCGGTGGGGGGTTCGGG